RNA–Protein interactions for RNA: ENST00000374816.7

NRP1-202, Transcript of neuropilin 1, humanhuman

TSL 1 (best) BASIC

Gene NRP1, Length 2,804 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRP1-202ENST00000374816 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
NRP1-202ENST00000374816 CCDC180Q9P1Z9 1646 aa26.17■■□□□ 1.78
NRP1-202ENST00000374816 ZCCHC6Q5VYS8 1495 aaKnown RBP25.48■■□□□ 1.67
NRP1-202ENST00000374816 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
NRP1-202ENST00000374816 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
NRP1-202ENST00000374816 DCAF8L2P0C7V8 631 aa24.84■■□□□ 1.57
NRP1-202ENST00000374816 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
NRP1-202ENST00000374816 ABCC9O60706 1549 aa24.43■■□□□ 1.5
NRP1-202ENST00000374816 NACADO15069 1562 aa24.24■■□□□ 1.47
NRP1-202ENST00000374816 SUPT5HO00267 1087 aaKnown RBP24.21■■□□□ 1.47
NRP1-202ENST00000374816 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
NRP1-202ENST00000374816 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
NRP1-202ENST00000374816 UNC13AQ9UPW8 1703 aa23.64■■□□□ 1.37
NRP1-202ENST00000374816 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
NRP1-202ENST00000374816 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
NRP1-202ENST00000374816 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
NRP1-202ENST00000374816 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
NRP1-202ENST00000374816 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
NRP1-202ENST00000374816 BAZ1AQ9NRL2 1556 aaPredicted RBP23.29■■□□□ 1.32
NRP1-202ENST00000374816 WIZO95785 1651 aa23.28■■□□□ 1.32
NRP1-202ENST00000374816 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
NRP1-202ENST00000374816 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
NRP1-202ENST00000374816 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
NRP1-202ENST00000374816 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
NRP1-202ENST00000374816 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
NRP1-202ENST00000374816 SMARCA2P51531 1590 aa22.81■■□□□ 1.24
NRP1-202ENST00000374816 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
NRP1-202ENST00000374816 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
NRP1-202ENST00000374816 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
NRP1-202ENST00000374816 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
NRP1-202ENST00000374816 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
NRP1-202ENST00000374816 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
NRP1-202ENST00000374816 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
NRP1-202ENST00000374816 NCAPD3P42695 1498 aa22.37■■□□□ 1.17
NRP1-202ENST00000374816 FAM9AQ8IZU1 332 aaPredicted RBP22.35■■□□□ 1.17
NRP1-202ENST00000374816 PCGF6Q9BYE7 350 aa22.2■■□□□ 1.14
NRP1-202ENST00000374816 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
NRP1-202ENST00000374816 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
NRP1-202ENST00000374816 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
NRP1-202ENST00000374816 SOGA1O94964 1423 aa22.09■■□□□ 1.13
NRP1-202ENST00000374816 EHMT2Q96KQ7 1210 aa22.08■■□□□ 1.13
NRP1-202ENST00000374816 HRCP23327 699 aa22.04■■□□□ 1.12
NRP1-202ENST00000374816 EEA1Q15075 1411 aa22.02■■□□□ 1.12
NRP1-202ENST00000374816 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
NRP1-202ENST00000374816 CFTRP13569 1480 aa22.01■■□□□ 1.11
NRP1-202ENST00000374816 PRDM2Q13029 1718 aa22■■□□□ 1.11
NRP1-202ENST00000374816 TOP2BQ02880 1626 aa22■■□□□ 1.11
NRP1-202ENST00000374816 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
NRP1-202ENST00000374816 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
NRP1-202ENST00000374816 CUX1P39880 1505 aa21.86■■□□□ 1.09
NRP1-202ENST00000374816 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
NRP1-202ENST00000374816 KIF21BO75037 1637 aa21.8■■□□□ 1.08
NRP1-202ENST00000374816 GOLGA3Q08378 1498 aa21.8■■□□□ 1.08
NRP1-202ENST00000374816 TNIKQ9UKE5 1360 aa21.78■■□□□ 1.08
NRP1-202ENST00000374816 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
NRP1-202ENST00000374816 CEP164Q9UPV0 1460 aa21.75■■□□□ 1.07
NRP1-202ENST00000374816 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
NRP1-202ENST00000374816 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.06
NRP1-202ENST00000374816 UBTFP17480 764 aaKnown RBP21.66■■□□□ 1.06
NRP1-202ENST00000374816 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
NRP1-202ENST00000374816 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
NRP1-202ENST00000374816 NESP48681 1621 aa21.6■■□□□ 1.05
NRP1-202ENST00000374816 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
NRP1-202ENST00000374816 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
NRP1-202ENST00000374816 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
NRP1-202ENST00000374816 PRXQ9BXM0 1461 aa21.55■■□□□ 1.04
NRP1-202ENST00000374816 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
NRP1-202ENST00000374816 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
NRP1-202ENST00000374816 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
NRP1-202ENST00000374816 CLIP1P30622 1438 aa21.46■■□□□ 1.03
NRP1-202ENST00000374816 CUX2O14529 1486 aa21.46■■□□□ 1.03
NRP1-202ENST00000374816 TOPBP1Q92547 1522 aa21.44■■□□□ 1.02
NRP1-202ENST00000374816 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
NRP1-202ENST00000374816 KIF21AQ7Z4S6 1674 aa21.38■■□□□ 1.01
NRP1-202ENST00000374816 URB2Q14146 1524 aaKnown RBP21.36■■□□□ 1.01
NRP1-202ENST00000374816 IGF1RP08069 1367 aa21.35■■□□□ 1.01
NRP1-202ENST00000374816 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
NRP1-202ENST00000374816 VPS8Q8N3P4 1428 aa21.33■■□□□ 1.01
NRP1-202ENST00000374816 RAD54L2Q9Y4B4 1467 aa21.33■■□□□ 1.01
NRP1-202ENST00000374816 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1.01
NRP1-202ENST00000374816 WDR97A6NE52 1622 aa21.31■■□□□ 1
NRP1-202ENST00000374816 RANGAP1P46060 587 aaPredicted RBP21.27■□□□□ 0.99
NRP1-202ENST00000374816 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
NRP1-202ENST00000374816 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
NRP1-202ENST00000374816 TTBK1Q5TCY1 1321 aaPredicted RBP21.23■□□□□ 0.99
NRP1-202ENST00000374816 CUL7Q14999 1698 aa21.19■□□□□ 0.98
NRP1-202ENST00000374816 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
NRP1-202ENST00000374816 ARHGAP35Q9NRY4 1499 aa21.16■□□□□ 0.98
NRP1-202ENST00000374816 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
NRP1-202ENST00000374816 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
NRP1-202ENST00000374816 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
NRP1-202ENST00000374816 APLP2Q06481 763 aa21.06■□□□□ 0.96
NRP1-202ENST00000374816 CTTNBP2Q8WZ74 1663 aa21.06■□□□□ 0.96
NRP1-202ENST00000374816 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
NRP1-202ENST00000374816 TDRD9Q8NDG6 1382 aaKnown RBP21.06■□□□□ 0.96
NRP1-202ENST00000374816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.01■□□□□ 0.95
NRP1-202ENST00000374816 PBRM1Q86U86 1689 aa21■□□□□ 0.95
NRP1-202ENST00000374816 WDR62O43379 1518 aa20.99■□□□□ 0.95
NRP1-202ENST00000374816 EFCAB5A4FU69 1503 aa20.93■□□□□ 0.94
NRP1-202ENST00000374816 KANK4Q5T7N3 995 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms