RNA–Protein interactions for RNA: ENST00000374643.7

YIPF6-202, Transcript of Yip1 domain family member 6, humanhuman

TSL 3

Gene YIPF6, Length 734 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF6-202ENST00000374643 NISCHQ9Y2I1 1504 aa31.96■■■□□ 2.71
YIPF6-202ENST00000374643 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
YIPF6-202ENST00000374643 ABCC9O60706 1549 aa28.16■■■□□ 2.1
YIPF6-202ENST00000374643 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
YIPF6-202ENST00000374643 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
YIPF6-202ENST00000374643 NACADO15069 1562 aa26.85■■□□□ 1.89
YIPF6-202ENST00000374643 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
YIPF6-202ENST00000374643 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
YIPF6-202ENST00000374643 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
YIPF6-202ENST00000374643 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
YIPF6-202ENST00000374643 PABPN1Q86U42 306 aaKnown RBP eCLIP26.3■■□□□ 1.8
YIPF6-202ENST00000374643 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
YIPF6-202ENST00000374643 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
YIPF6-202ENST00000374643 DNAJC5BQ9UF47 199 aa25.94■■□□□ 1.74
YIPF6-202ENST00000374643 SHROOM4Q9ULL8 1493 aa25.78■■□□□ 1.72
YIPF6-202ENST00000374643 EIF4G1Q04637 1599 aaKnown RBP25.45■■□□□ 1.66
YIPF6-202ENST00000374643 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
YIPF6-202ENST00000374643 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
YIPF6-202ENST00000374643 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
YIPF6-202ENST00000374643 BAZ1AQ9NRL2 1556 aaPredicted RBP24.81■■□□□ 1.56
YIPF6-202ENST00000374643 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
YIPF6-202ENST00000374643 NCAPD3P42695 1498 aa24.75■■□□□ 1.55
YIPF6-202ENST00000374643 SMARCA2P51531 1590 aa24.75■■□□□ 1.55
YIPF6-202ENST00000374643 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
YIPF6-202ENST00000374643 HMGXB3Q12766 1538 aa24.62■■□□□ 1.53
YIPF6-202ENST00000374643 BAZ1BQ9UIG0 1483 aaKnown RBP24.6■■□□□ 1.53
YIPF6-202ENST00000374643 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
YIPF6-202ENST00000374643 WIZO95785 1651 aa24.4■■□□□ 1.5
YIPF6-202ENST00000374643 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
YIPF6-202ENST00000374643 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
YIPF6-202ENST00000374643 NESP48681 1621 aa24.27■■□□□ 1.48
YIPF6-202ENST00000374643 LAMC3Q9Y6N6 1575 aa24.17■■□□□ 1.46
YIPF6-202ENST00000374643 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
YIPF6-202ENST00000374643 CADPSQ9ULU8 1353 aa24.06■■□□□ 1.44
YIPF6-202ENST00000374643 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
YIPF6-202ENST00000374643 CUX2O14529 1486 aa24.04■■□□□ 1.44
YIPF6-202ENST00000374643 KIF21AQ7Z4S6 1674 aa24■■□□□ 1.43
YIPF6-202ENST00000374643 THOC2Q8NI27 1593 aaKnown RBP23.91■■□□□ 1.42
YIPF6-202ENST00000374643 CFTRP13569 1480 aa23.84■■□□□ 1.41
YIPF6-202ENST00000374643 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
YIPF6-202ENST00000374643 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
YIPF6-202ENST00000374643 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
YIPF6-202ENST00000374643 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
YIPF6-202ENST00000374643 PRDM2Q13029 1718 aa23.7■■□□□ 1.39
YIPF6-202ENST00000374643 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
YIPF6-202ENST00000374643 WDR62O43379 1518 aa23.68■■□□□ 1.38
YIPF6-202ENST00000374643 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
YIPF6-202ENST00000374643 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
YIPF6-202ENST00000374643 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
YIPF6-202ENST00000374643 TOPBP1Q92547 1522 aa23.39■■□□□ 1.34
YIPF6-202ENST00000374643 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
YIPF6-202ENST00000374643 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
YIPF6-202ENST00000374643 ZNF608Q9ULD9 1512 aaPredicted RBP23.2■■□□□ 1.3
YIPF6-202ENST00000374643 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
YIPF6-202ENST00000374643 CUX1P39880 1505 aa23.13■■□□□ 1.29
YIPF6-202ENST00000374643 SOGA1O94964 1423 aa23.12■■□□□ 1.29
YIPF6-202ENST00000374643 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
YIPF6-202ENST00000374643 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
YIPF6-202ENST00000374643 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
YIPF6-202ENST00000374643 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
YIPF6-202ENST00000374643 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
YIPF6-202ENST00000374643 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.28
YIPF6-202ENST00000374643 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
YIPF6-202ENST00000374643 FBLN2P98095 1184 aa22.96■■□□□ 1.27
YIPF6-202ENST00000374643 WRNQ14191 1432 aaPredicted RBP eCLIP22.94■■□□□ 1.26
YIPF6-202ENST00000374643 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
YIPF6-202ENST00000374643 CHD1O14646 1710 aa22.89■■□□□ 1.26
YIPF6-202ENST00000374643 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
YIPF6-202ENST00000374643 BIVM-ERCC5R4GMW8 1640 aa22.88■■□□□ 1.25
YIPF6-202ENST00000374643 SYNJ1O43426 1573 aa22.87■■□□□ 1.25
YIPF6-202ENST00000374643 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
YIPF6-202ENST00000374643 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
YIPF6-202ENST00000374643 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
YIPF6-202ENST00000374643 ABCA10Q8WWZ4 1543 aa22.83■■□□□ 1.25
YIPF6-202ENST00000374643 TRIM41Q8WV44 630 aa22.83■■□□□ 1.25
YIPF6-202ENST00000374643 PBRM1Q86U86 1689 aa22.81■■□□□ 1.24
YIPF6-202ENST00000374643 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
YIPF6-202ENST00000374643 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
YIPF6-202ENST00000374643 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
YIPF6-202ENST00000374643 SYNJ2O15056 1496 aa22.71■■□□□ 1.23
YIPF6-202ENST00000374643 RIMBP3CA6NJZ7 1639 aa22.69■■□□□ 1.22
YIPF6-202ENST00000374643 RIMBP3BA6NNM3 1639 aa22.69■■□□□ 1.22
YIPF6-202ENST00000374643 RIMBP3Q9UFD9 1639 aa22.69■■□□□ 1.22
YIPF6-202ENST00000374643 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
YIPF6-202ENST00000374643 ARHGEF11O15085 1522 aa22.66■■□□□ 1.22
YIPF6-202ENST00000374643 ADAMTS12P58397 1594 aa22.58■■□□□ 1.2
YIPF6-202ENST00000374643 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
YIPF6-202ENST00000374643 CLASP1Q7Z460 1538 aa22.56■■□□□ 1.2
YIPF6-202ENST00000374643 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
YIPF6-202ENST00000374643 FHAD1B1AJZ9 1412 aa22.55■■□□□ 1.2
YIPF6-202ENST00000374643 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
YIPF6-202ENST00000374643 KIF27Q86VH2 1401 aa22.5■■□□□ 1.19
YIPF6-202ENST00000374643 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
YIPF6-202ENST00000374643 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
YIPF6-202ENST00000374643 NUP160Q12769 1436 aa22.41■■□□□ 1.18
YIPF6-202ENST00000374643 IGF1RP08069 1367 aa22.38■■□□□ 1.17
YIPF6-202ENST00000374643 CUL7Q14999 1698 aa22.36■■□□□ 1.17
YIPF6-202ENST00000374643 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
YIPF6-202ENST00000374643 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
YIPF6-202ENST00000374643 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms