RNA–Protein interactions for RNA: ENST00000373899.3

TFAM-202, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 1,121 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-202ENST00000373899 AEBP2Q6ZN18 517 aaPredicted RBP34.41■■■■□ 3.1
TFAM-202ENST00000373899 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
TFAM-202ENST00000373899 CHIC1Q5VXU3 224 aa32.62■■■□□ 2.81
TFAM-202ENST00000373899 ABCC9O60706 1549 aa30.32■■■□□ 2.44
TFAM-202ENST00000373899 CCDC180Q9P1Z9 1646 aa30.14■■■□□ 2.42
TFAM-202ENST00000373899 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.27
TFAM-202ENST00000373899 PHF23Q9BUL5 403 aaPredicted RBP28.91■■■□□ 2.22
TFAM-202ENST00000373899 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
TFAM-202ENST00000373899 DNAJC5BQ9UF47 199 aa28.74■■■□□ 2.19
TFAM-202ENST00000373899 NACADO15069 1562 aa28.5■■■□□ 2.15
TFAM-202ENST00000373899 UNC13AQ9UPW8 1703 aa28.24■■■□□ 2.11
TFAM-202ENST00000373899 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
TFAM-202ENST00000373899 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.08
TFAM-202ENST00000373899 BICRAQ9NZM4 1560 aa28.05■■■□□ 2.08
TFAM-202ENST00000373899 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
TFAM-202ENST00000373899 ZCCHC6Q5VYS8 1495 aaKnown RBP27.66■■■□□ 2.02
TFAM-202ENST00000373899 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
TFAM-202ENST00000373899 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
TFAM-202ENST00000373899 CC2D2AQ9P2K1 1620 aa27.43■■□□□ 1.98
TFAM-202ENST00000373899 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
TFAM-202ENST00000373899 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
TFAM-202ENST00000373899 FOXD1Q16676 465 aa27.33■■□□□ 1.97
TFAM-202ENST00000373899 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
TFAM-202ENST00000373899 DNAJC5Q9H3Z4 198 aa26.52■■□□□ 1.84
TFAM-202ENST00000373899 NCAPD3P42695 1498 aa26.33■■□□□ 1.81
TFAM-202ENST00000373899 CUX2O14529 1486 aa26.26■■□□□ 1.79
TFAM-202ENST00000373899 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
TFAM-202ENST00000373899 SMARCA4P51532 1647 aa26.14■■□□□ 1.78
TFAM-202ENST00000373899 HMGXB3Q12766 1538 aa26.14■■□□□ 1.77
TFAM-202ENST00000373899 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
TFAM-202ENST00000373899 SMARCA2P51531 1590 aa26.08■■□□□ 1.77
TFAM-202ENST00000373899 PLPPR3Q6T4P5 718 aa26.02■■□□□ 1.76
TFAM-202ENST00000373899 NESP48681 1621 aa26.02■■□□□ 1.76
TFAM-202ENST00000373899 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
TFAM-202ENST00000373899 BAZ1AQ9NRL2 1556 aaPredicted RBP25.92■■□□□ 1.74
TFAM-202ENST00000373899 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
TFAM-202ENST00000373899 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
TFAM-202ENST00000373899 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
TFAM-202ENST00000373899 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
TFAM-202ENST00000373899 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
TFAM-202ENST00000373899 PPP6R1Q9UPN7 881 aa25.58■■□□□ 1.69
TFAM-202ENST00000373899 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
TFAM-202ENST00000373899 MSH5O43196 834 aa25.5■■□□□ 1.67
TFAM-202ENST00000373899 PIAS4Q8N2W9 510 aaPredicted RBP25.49■■□□□ 1.67
TFAM-202ENST00000373899 ADRA2BP18089 450 aa25.47■■□□□ 1.67
TFAM-202ENST00000373899 CADPSQ9ULU8 1353 aa25.46■■□□□ 1.67
TFAM-202ENST00000373899 WIZO95785 1651 aa25.43■■□□□ 1.66
TFAM-202ENST00000373899 WDR62O43379 1518 aa25.42■■□□□ 1.66
TFAM-202ENST00000373899 MRC2Q9UBG0 1479 aa25.41■■□□□ 1.66
TFAM-202ENST00000373899 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
TFAM-202ENST00000373899 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
TFAM-202ENST00000373899 CFTRP13569 1480 aa25.17■■□□□ 1.62
TFAM-202ENST00000373899 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
TFAM-202ENST00000373899 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
TFAM-202ENST00000373899 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
TFAM-202ENST00000373899 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
TFAM-202ENST00000373899 POTEDQ86YR6 584 aa24.96■■□□□ 1.59
TFAM-202ENST00000373899 PRDM2Q13029 1718 aa24.95■■□□□ 1.59
TFAM-202ENST00000373899 OSCARQ8IYS5 282 aa24.9■■□□□ 1.58
TFAM-202ENST00000373899 ZNF608Q9ULD9 1512 aaPredicted RBP24.78■■□□□ 1.56
TFAM-202ENST00000373899 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
TFAM-202ENST00000373899 RIMBP3CA6NJZ7 1639 aa24.76■■□□□ 1.55
TFAM-202ENST00000373899 RIMBP3BA6NNM3 1639 aa24.76■■□□□ 1.55
TFAM-202ENST00000373899 RIMBP3Q9UFD9 1639 aa24.76■■□□□ 1.55
TFAM-202ENST00000373899 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
TFAM-202ENST00000373899 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
TFAM-202ENST00000373899 EIF4G3O43432 1585 aaKnown RBP24.65■■□□□ 1.54
TFAM-202ENST00000373899 ARHGEF11O15085 1522 aa24.64■■□□□ 1.53
TFAM-202ENST00000373899 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
TFAM-202ENST00000373899 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
TFAM-202ENST00000373899 ABCC8Q09428 1581 aa24.56■■□□□ 1.52
TFAM-202ENST00000373899 CHD1O14646 1710 aa24.52■■□□□ 1.52
TFAM-202ENST00000373899 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.516e-10■■■■■ 33.6
TFAM-202ENST00000373899 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
TFAM-202ENST00000373899 ARAP1Q96P48 1450 aa24.39■■□□□ 1.5
TFAM-202ENST00000373899 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
TFAM-202ENST00000373899 CYB5RLQ6IPT4 315 aa24.32■■□□□ 1.48
TFAM-202ENST00000373899 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
TFAM-202ENST00000373899 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
TFAM-202ENST00000373899 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
TFAM-202ENST00000373899 SOGA1O94964 1423 aa24.25■■□□□ 1.47
TFAM-202ENST00000373899 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
TFAM-202ENST00000373899 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
TFAM-202ENST00000373899 CUX1P39880 1505 aa24.21■■□□□ 1.47
TFAM-202ENST00000373899 FBLN2P98095 1184 aa24.2■■□□□ 1.46
TFAM-202ENST00000373899 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
TFAM-202ENST00000373899 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
TFAM-202ENST00000373899 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
TFAM-202ENST00000373899 GRIN2BQ13224 1484 aa24.1■■□□□ 1.45
TFAM-202ENST00000373899 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
TFAM-202ENST00000373899 TRHP20396 242 aaPredicted RBP24.07■■□□□ 1.44
TFAM-202ENST00000373899 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
TFAM-202ENST00000373899 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
TFAM-202ENST00000373899 ABCA5Q8WWZ7 1642 aa24.01■■□□□ 1.43
TFAM-202ENST00000373899 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
TFAM-202ENST00000373899 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
TFAM-202ENST00000373899 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
TFAM-202ENST00000373899 ADAMTS12P58397 1594 aa23.82■■□□□ 1.4
TFAM-202ENST00000373899 GRIN2AQ12879 1464 aa23.82■■□□□ 1.4
TFAM-202ENST00000373899 CEP170Q5SW79 1584 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms