RNA–Protein interactions for RNA: ENST00000373632.8

RPN2-203, Transcript of ribophorin II, humanhuman

TSL 5

Gene RPN2, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-203ENST00000373632 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
RPN2-203ENST00000373632 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
RPN2-203ENST00000373632 ABCC9O60706 1549 aa28.89■■■□□ 2.22
RPN2-203ENST00000373632 RB1CC1Q8TDY2 1594 aa27.61■■■□□ 2.01
RPN2-203ENST00000373632 NACADO15069 1562 aa27.44■■□□□ 1.98
RPN2-203ENST00000373632 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
RPN2-203ENST00000373632 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
RPN2-203ENST00000373632 PABPN1Q86U42 306 aaKnown RBP eCLIP26.9■■□□□ 1.9
RPN2-203ENST00000373632 UNC13AQ9UPW8 1703 aa26.88■■□□□ 1.89
RPN2-203ENST00000373632 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
RPN2-203ENST00000373632 ZCCHC6Q5VYS8 1495 aaKnown RBP26.86■■□□□ 1.89
RPN2-203ENST00000373632 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
RPN2-203ENST00000373632 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
RPN2-203ENST00000373632 SHROOM4Q9ULL8 1493 aa26.48■■□□□ 1.83
RPN2-203ENST00000373632 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
RPN2-203ENST00000373632 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
RPN2-203ENST00000373632 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
RPN2-203ENST00000373632 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
RPN2-203ENST00000373632 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
RPN2-203ENST00000373632 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
RPN2-203ENST00000373632 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
RPN2-203ENST00000373632 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
RPN2-203ENST00000373632 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
RPN2-203ENST00000373632 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
RPN2-203ENST00000373632 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
RPN2-203ENST00000373632 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
RPN2-203ENST00000373632 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
RPN2-203ENST00000373632 MROH2BQ7Z745 1585 aa24.92■■□□□ 1.58
RPN2-203ENST00000373632 CUX2O14529 1486 aa24.9■■□□□ 1.58
RPN2-203ENST00000373632 NESP48681 1621 aa24.81■■□□□ 1.56
RPN2-203ENST00000373632 LAMC3Q9Y6N6 1575 aa24.74■■□□□ 1.55
RPN2-203ENST00000373632 DNAJC5Q9H3Z4 198 aa24.68■■□□□ 1.54
RPN2-203ENST00000373632 WIZO95785 1651 aa24.63■■□□□ 1.53
RPN2-203ENST00000373632 PDS5BQ9NTI5 1447 aa24.62■■□□□ 1.53
RPN2-203ENST00000373632 THOC2Q8NI27 1593 aaKnown RBP24.56■■□□□ 1.52
RPN2-203ENST00000373632 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
RPN2-203ENST00000373632 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
RPN2-203ENST00000373632 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.51
RPN2-203ENST00000373632 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
RPN2-203ENST00000373632 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
RPN2-203ENST00000373632 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
RPN2-203ENST00000373632 WDR62O43379 1518 aa24.29■■□□□ 1.48
RPN2-203ENST00000373632 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
RPN2-203ENST00000373632 CFTRP13569 1480 aa24.27■■□□□ 1.48
RPN2-203ENST00000373632 PRDM2Q13029 1718 aa24.08■■□□□ 1.45
RPN2-203ENST00000373632 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
RPN2-203ENST00000373632 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
RPN2-203ENST00000373632 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
RPN2-203ENST00000373632 IFT140Q96RY7 1462 aa23.82■■□□□ 1.4
RPN2-203ENST00000373632 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
RPN2-203ENST00000373632 OSCARQ8IYS5 282 aa23.78■■□□□ 1.4
RPN2-203ENST00000373632 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
RPN2-203ENST00000373632 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
RPN2-203ENST00000373632 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
RPN2-203ENST00000373632 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
RPN2-203ENST00000373632 POLA1P09884 1462 aaPredicted RBP23.57■■□□□ 1.36
RPN2-203ENST00000373632 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
RPN2-203ENST00000373632 SUPT5HO00267 1087 aaKnown RBP23.54■■□□□ 1.36
RPN2-203ENST00000373632 AQRO60306 1485 aaKnown RBP eCLIP23.51■■□□□ 1.352e-6■■■■■ 28.5
RPN2-203ENST00000373632 SOGA1O94964 1423 aa23.49■■□□□ 1.35
RPN2-203ENST00000373632 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
RPN2-203ENST00000373632 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.34
RPN2-203ENST00000373632 FBLN2P98095 1184 aa23.43■■□□□ 1.34
RPN2-203ENST00000373632 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
RPN2-203ENST00000373632 CUX1P39880 1505 aa23.42■■□□□ 1.34
RPN2-203ENST00000373632 CHD1O14646 1710 aa23.42■■□□□ 1.34
RPN2-203ENST00000373632 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
RPN2-203ENST00000373632 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
RPN2-203ENST00000373632 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
RPN2-203ENST00000373632 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
RPN2-203ENST00000373632 ARHGEF11O15085 1522 aa23.37■■□□□ 1.33
RPN2-203ENST00000373632 SNAPC4Q5SXM2 1469 aa23.32■■□□□ 1.32
RPN2-203ENST00000373632 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
RPN2-203ENST00000373632 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
RPN2-203ENST00000373632 CHMP7Q8WUX9 453 aaPredicted RBP23.27■■□□□ 1.32
RPN2-203ENST00000373632 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
RPN2-203ENST00000373632 SYNJ1O43426 1573 aa23.22■■□□□ 1.31
RPN2-203ENST00000373632 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
RPN2-203ENST00000373632 SYNJ2O15056 1496 aa23.2■■□□□ 1.3
RPN2-203ENST00000373632 CYB5RLQ6IPT4 315 aa23.2■■□□□ 1.3
RPN2-203ENST00000373632 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
RPN2-203ENST00000373632 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
RPN2-203ENST00000373632 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.29
RPN2-203ENST00000373632 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
RPN2-203ENST00000373632 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
RPN2-203ENST00000373632 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
RPN2-203ENST00000373632 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
RPN2-203ENST00000373632 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
RPN2-203ENST00000373632 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
RPN2-203ENST00000373632 TRHP20396 242 aaPredicted RBP22.97■■□□□ 1.27
RPN2-203ENST00000373632 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
RPN2-203ENST00000373632 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
RPN2-203ENST00000373632 NUP160Q12769 1436 aa22.87■■□□□ 1.25
RPN2-203ENST00000373632 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
RPN2-203ENST00000373632 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
RPN2-203ENST00000373632 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
RPN2-203ENST00000373632 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
RPN2-203ENST00000373632 PRG4Q92954 1404 aaPredicted RBP22.67■■□□□ 1.22
RPN2-203ENST00000373632 CUL7Q14999 1698 aa22.65■■□□□ 1.22
RPN2-203ENST00000373632 JPH4Q96JJ6 628 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms