RNA–Protein interactions for RNA: ENST00000373562.7

LCK-205, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 4

Gene LCK, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-205ENST00000373562 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
LCK-205ENST00000373562 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
LCK-205ENST00000373562 ABCC9O60706 1549 aa25.09■■□□□ 1.61
LCK-205ENST00000373562 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
LCK-205ENST00000373562 NACADO15069 1562 aa23.81■■□□□ 1.4
LCK-205ENST00000373562 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
LCK-205ENST00000373562 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
LCK-205ENST00000373562 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
LCK-205ENST00000373562 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
LCK-205ENST00000373562 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
LCK-205ENST00000373562 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
LCK-205ENST00000373562 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
LCK-205ENST00000373562 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
LCK-205ENST00000373562 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
LCK-205ENST00000373562 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
LCK-205ENST00000373562 CC2D2AQ9P2K1 1620 aa22.69■■□□□ 1.22
LCK-205ENST00000373562 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
LCK-205ENST00000373562 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
LCK-205ENST00000373562 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
LCK-205ENST00000373562 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
LCK-205ENST00000373562 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
LCK-205ENST00000373562 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
LCK-205ENST00000373562 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
LCK-205ENST00000373562 CUX2O14529 1486 aa21.76■■□□□ 1.07
LCK-205ENST00000373562 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
LCK-205ENST00000373562 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
LCK-205ENST00000373562 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
LCK-205ENST00000373562 ERCC6Q03468 1493 aa21.66■■□□□ 1.06
LCK-205ENST00000373562 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.05
LCK-205ENST00000373562 NESP48681 1621 aa21.55■■□□□ 1.04
LCK-205ENST00000373562 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
LCK-205ENST00000373562 LAMC3Q9Y6N6 1575 aa21.47■■□□□ 1.03
LCK-205ENST00000373562 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
LCK-205ENST00000373562 PDS5BQ9NTI5 1447 aa21.34■■□□□ 1.01
LCK-205ENST00000373562 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
LCK-205ENST00000373562 KIF21AQ7Z4S6 1674 aa21.22■□□□□ 0.99
LCK-205ENST00000373562 WIZO95785 1651 aa21.21■□□□□ 0.99
LCK-205ENST00000373562 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
LCK-205ENST00000373562 WDR62O43379 1518 aa21.14■□□□□ 0.97
LCK-205ENST00000373562 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
LCK-205ENST00000373562 CFTRP13569 1480 aa21.07■□□□□ 0.96
LCK-205ENST00000373562 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
LCK-205ENST00000373562 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
LCK-205ENST00000373562 FANCD2Q9BXW9 1451 aa21.02■□□□□ 0.96
LCK-205ENST00000373562 URB2Q14146 1524 aaKnown RBP20.86■□□□□ 0.93
LCK-205ENST00000373562 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
LCK-205ENST00000373562 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
LCK-205ENST00000373562 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
LCK-205ENST00000373562 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
LCK-205ENST00000373562 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
LCK-205ENST00000373562 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
LCK-205ENST00000373562 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
LCK-205ENST00000373562 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.89
LCK-205ENST00000373562 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
LCK-205ENST00000373562 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
LCK-205ENST00000373562 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.87
LCK-205ENST00000373562 SUPT5HO00267 1087 aaKnown RBP20.42■□□□□ 0.86
LCK-205ENST00000373562 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
LCK-205ENST00000373562 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
LCK-205ENST00000373562 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
LCK-205ENST00000373562 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
LCK-205ENST00000373562 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
LCK-205ENST00000373562 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.85
LCK-205ENST00000373562 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
LCK-205ENST00000373562 SOGA1O94964 1423 aa20.29■□□□□ 0.84
LCK-205ENST00000373562 RAD54L2Q9Y4B4 1467 aa20.29■□□□□ 0.84
LCK-205ENST00000373562 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
LCK-205ENST00000373562 CUX1P39880 1505 aa20.25■□□□□ 0.83
LCK-205ENST00000373562 CHD1O14646 1710 aa20.24■□□□□ 0.83
LCK-205ENST00000373562 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
LCK-205ENST00000373562 MAGI1Q96QZ7 1491 aaPredicted RBP20.19■□□□□ 0.82
LCK-205ENST00000373562 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
LCK-205ENST00000373562 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
LCK-205ENST00000373562 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
LCK-205ENST00000373562 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
LCK-205ENST00000373562 FBLN2P98095 1184 aa20.12■□□□□ 0.81
LCK-205ENST00000373562 CYB5RLQ6IPT4 315 aa20.11■□□□□ 0.81
LCK-205ENST00000373562 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
LCK-205ENST00000373562 ABCA10Q8WWZ4 1543 aa20.09■□□□□ 0.81
LCK-205ENST00000373562 SYNJ1O43426 1573 aa20.08■□□□□ 0.8
LCK-205ENST00000373562 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
LCK-205ENST00000373562 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
LCK-205ENST00000373562 ABCA5Q8WWZ7 1642 aa20.04■□□□□ 0.8
LCK-205ENST00000373562 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
LCK-205ENST00000373562 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
LCK-205ENST00000373562 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
LCK-205ENST00000373562 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
LCK-205ENST00000373562 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
LCK-205ENST00000373562 NUP160Q12769 1436 aa19.89■□□□□ 0.77
LCK-205ENST00000373562 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
LCK-205ENST00000373562 TRHP20396 242 aaPredicted RBP19.84■□□□□ 0.77
LCK-205ENST00000373562 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
LCK-205ENST00000373562 ERICH3Q5RHP9 1530 aa19.82■□□□□ 0.76
LCK-205ENST00000373562 CEP170Q5SW79 1584 aa19.8■□□□□ 0.76
LCK-205ENST00000373562 SHROOM2Q13796 1616 aa19.77■□□□□ 0.76
LCK-205ENST00000373562 ERCC6L2Q5T890 1561 aa19.74■□□□□ 0.75
LCK-205ENST00000373562 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
LCK-205ENST00000373562 PRG4Q92954 1404 aaPredicted RBP19.6■□□□□ 0.73
LCK-205ENST00000373562 JPH4Q96JJ6 628 aa19.57■□□□□ 0.72
LCK-205ENST00000373562 IGF1RP08069 1367 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms