RNA–Protein interactions for RNA: ENST00000373373.8

UPRT-201, Transcript of uracil phosphoribosyltransferase homolog, humanhuman

TSL 3

Gene UPRT, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPRT-201ENST00000373373 NISCHQ9Y2I1 1504 aa31.43■■■□□ 2.62
UPRT-201ENST00000373373 ABCC9O60706 1549 aa29.04■■■□□ 2.24
UPRT-201ENST00000373373 CCDC180Q9P1Z9 1646 aa28.45■■■□□ 2.14
UPRT-201ENST00000373373 DNAJC5BQ9UF47 199 aa27.73■■■□□ 2.03
UPRT-201ENST00000373373 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
UPRT-201ENST00000373373 NACADO15069 1562 aa27.15■■□□□ 1.94
UPRT-201ENST00000373373 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
UPRT-201ENST00000373373 DCAF8L2P0C7V8 631 aa26.91■■□□□ 1.9
UPRT-201ENST00000373373 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
UPRT-201ENST00000373373 BICRAQ9NZM4 1560 aa26.5■■□□□ 1.83
UPRT-201ENST00000373373 UNC13AQ9UPW8 1703 aa26.49■■□□□ 1.83
UPRT-201ENST00000373373 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
UPRT-201ENST00000373373 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
UPRT-201ENST00000373373 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
UPRT-201ENST00000373373 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
UPRT-201ENST00000373373 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
UPRT-201ENST00000373373 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
UPRT-201ENST00000373373 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
UPRT-201ENST00000373373 SCRIBQ14160 1630 aa25.79■■□□□ 1.72
UPRT-201ENST00000373373 CUX2O14529 1486 aa25.44■■□□□ 1.66
UPRT-201ENST00000373373 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
UPRT-201ENST00000373373 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
UPRT-201ENST00000373373 ATAD2BQ9ULI0 1458 aa24.84■■□□□ 1.57
UPRT-201ENST00000373373 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
UPRT-201ENST00000373373 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
UPRT-201ENST00000373373 NESP48681 1621 aa24.68■■□□□ 1.54
UPRT-201ENST00000373373 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
UPRT-201ENST00000373373 BAZ1BQ9UIG0 1483 aaKnown RBP24.61■■□□□ 1.53
UPRT-201ENST00000373373 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
UPRT-201ENST00000373373 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
UPRT-201ENST00000373373 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
UPRT-201ENST00000373373 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
UPRT-201ENST00000373373 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
UPRT-201ENST00000373373 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
UPRT-201ENST00000373373 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
UPRT-201ENST00000373373 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
UPRT-201ENST00000373373 KIF21AQ7Z4S6 1674 aa24.28■■□□□ 1.48
UPRT-201ENST00000373373 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
UPRT-201ENST00000373373 WDR62O43379 1518 aa24.2■■□□□ 1.46
UPRT-201ENST00000373373 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
UPRT-201ENST00000373373 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
UPRT-201ENST00000373373 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
UPRT-201ENST00000373373 CFTRP13569 1480 aa23.86■■□□□ 1.41
UPRT-201ENST00000373373 RIMBP3CA6NJZ7 1639 aa23.73■■□□□ 1.39
UPRT-201ENST00000373373 RIMBP3BA6NNM3 1639 aa23.73■■□□□ 1.39
UPRT-201ENST00000373373 RIMBP3Q9UFD9 1639 aa23.73■■□□□ 1.39
UPRT-201ENST00000373373 WIZO95785 1651 aa23.73■■□□□ 1.39
UPRT-201ENST00000373373 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
UPRT-201ENST00000373373 ARHGEF11O15085 1522 aa23.68■■□□□ 1.38
UPRT-201ENST00000373373 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
UPRT-201ENST00000373373 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
UPRT-201ENST00000373373 CYB5RLQ6IPT4 315 aa23.64■■□□□ 1.37
UPRT-201ENST00000373373 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
UPRT-201ENST00000373373 AEBP2Q6ZN18 517 aaPredicted RBP23.52■■□□□ 1.36
UPRT-201ENST00000373373 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
UPRT-201ENST00000373373 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
UPRT-201ENST00000373373 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
UPRT-201ENST00000373373 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
UPRT-201ENST00000373373 FBLN2P98095 1184 aa23.39■■□□□ 1.33
UPRT-201ENST00000373373 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
UPRT-201ENST00000373373 PRDM2Q13029 1718 aa23.35■■□□□ 1.33
UPRT-201ENST00000373373 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
UPRT-201ENST00000373373 AQRO60306 1485 aaKnown RBP eCLIP23.28■■□□□ 1.32
UPRT-201ENST00000373373 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
UPRT-201ENST00000373373 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
UPRT-201ENST00000373373 CHD1O14646 1710 aa23.2■■□□□ 1.3
UPRT-201ENST00000373373 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
UPRT-201ENST00000373373 TARBP1Q13395 1621 aaKnown RBP23.17■■□□□ 1.3
UPRT-201ENST00000373373 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
UPRT-201ENST00000373373 SOGA1O94964 1423 aa23.1■■□□□ 1.29
UPRT-201ENST00000373373 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
UPRT-201ENST00000373373 WDR97A6NE52 1622 aa23.08■■□□□ 1.28
UPRT-201ENST00000373373 TDRD9Q8NDG6 1382 aaKnown RBP23.07■■□□□ 1.28
UPRT-201ENST00000373373 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
UPRT-201ENST00000373373 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
UPRT-201ENST00000373373 SNAPC4Q5SXM2 1469 aa23.02■■□□□ 1.28
UPRT-201ENST00000373373 RAD54L2Q9Y4B4 1467 aa22.99■■□□□ 1.27
UPRT-201ENST00000373373 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
UPRT-201ENST00000373373 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
UPRT-201ENST00000373373 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
UPRT-201ENST00000373373 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
UPRT-201ENST00000373373 CUX1P39880 1505 aa22.7■■□□□ 1.22
UPRT-201ENST00000373373 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.21
UPRT-201ENST00000373373 GRIN2AQ12879 1464 aa22.62■■□□□ 1.21
UPRT-201ENST00000373373 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
UPRT-201ENST00000373373 NPM1P06748 294 aaKnown RBP eCLIP22.59■■□□□ 1.21
UPRT-201ENST00000373373 NUP160Q12769 1436 aa22.57■■□□□ 1.2
UPRT-201ENST00000373373 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
UPRT-201ENST00000373373 ABCA5Q8WWZ7 1642 aa22.55■■□□□ 1.2
UPRT-201ENST00000373373 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
UPRT-201ENST00000373373 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
UPRT-201ENST00000373373 FAM69CQ0P6D2 419 aa22.51■■□□□ 1.19
UPRT-201ENST00000373373 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
UPRT-201ENST00000373373 SHROOM2Q13796 1616 aa22.46■■□□□ 1.19
UPRT-201ENST00000373373 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
UPRT-201ENST00000373373 ABCC10Q5T3U5 1492 aa22.44■■□□□ 1.18
UPRT-201ENST00000373373 PRG4Q92954 1404 aaPredicted RBP22.44■■□□□ 1.18
UPRT-201ENST00000373373 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
UPRT-201ENST00000373373 KIF13AQ9H1H9 1805 aa22.38■■□□□ 1.17
UPRT-201ENST00000373373 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms