RNA–Protein interactions for RNA: ENST00000372274.5

TMEM254-202, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-202ENST00000372274 NISCHQ9Y2I1 1504 aa28.34■■■□□ 2.13
TMEM254-202ENST00000372274 CCDC180Q9P1Z9 1646 aa25.32■■□□□ 1.64
TMEM254-202ENST00000372274 ABCC9O60706 1549 aa25.23■■□□□ 1.63
TMEM254-202ENST00000372274 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.44
TMEM254-202ENST00000372274 NACADO15069 1562 aa23.95■■□□□ 1.43
TMEM254-202ENST00000372274 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
TMEM254-202ENST00000372274 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
TMEM254-202ENST00000372274 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
TMEM254-202ENST00000372274 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
TMEM254-202ENST00000372274 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
TMEM254-202ENST00000372274 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
TMEM254-202ENST00000372274 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
TMEM254-202ENST00000372274 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
TMEM254-202ENST00000372274 SHROOM4Q9ULL8 1493 aa23.1■■□□□ 1.29
TMEM254-202ENST00000372274 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
TMEM254-202ENST00000372274 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
TMEM254-202ENST00000372274 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
TMEM254-202ENST00000372274 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
TMEM254-202ENST00000372274 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
TMEM254-202ENST00000372274 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.12
TMEM254-202ENST00000372274 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
TMEM254-202ENST00000372274 SMARCA2P51531 1590 aa22■■□□□ 1.11
TMEM254-202ENST00000372274 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
TMEM254-202ENST00000372274 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
TMEM254-202ENST00000372274 PEG3Q9GZU2 1588 aa21.86■■□□□ 1.09
TMEM254-202ENST00000372274 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
TMEM254-202ENST00000372274 MROH2BQ7Z745 1585 aa21.83■■□□□ 1.09
TMEM254-202ENST00000372274 ERCC6Q03468 1493 aa21.77■■□□□ 1.08
TMEM254-202ENST00000372274 CUX2O14529 1486 aa21.71■■□□□ 1.07
TMEM254-202ENST00000372274 NESP48681 1621 aa21.7■■□□□ 1.06
TMEM254-202ENST00000372274 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
TMEM254-202ENST00000372274 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
TMEM254-202ENST00000372274 WIZO95785 1651 aa21.53■■□□□ 1.04
TMEM254-202ENST00000372274 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
TMEM254-202ENST00000372274 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
TMEM254-202ENST00000372274 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
TMEM254-202ENST00000372274 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
TMEM254-202ENST00000372274 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
TMEM254-202ENST00000372274 TOP2AP11388 1531 aaKnown RBP21.3■■□□□ 1
TMEM254-202ENST00000372274 MRC2Q9UBG0 1479 aa21.27■■□□□ 1
TMEM254-202ENST00000372274 CFTRP13569 1480 aa21.26■□□□□ 0.99
TMEM254-202ENST00000372274 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
TMEM254-202ENST00000372274 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
TMEM254-202ENST00000372274 WDR62O43379 1518 aa21.2■□□□□ 0.98
TMEM254-202ENST00000372274 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
TMEM254-202ENST00000372274 URB2Q14146 1524 aaKnown RBP21.01■□□□□ 0.95
TMEM254-202ENST00000372274 PRDM2Q13029 1718 aa20.93■□□□□ 0.94
TMEM254-202ENST00000372274 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
TMEM254-202ENST00000372274 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
TMEM254-202ENST00000372274 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
TMEM254-202ENST00000372274 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
TMEM254-202ENST00000372274 DNMBPQ6XZF7 1577 aa20.74■□□□□ 0.91
TMEM254-202ENST00000372274 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
TMEM254-202ENST00000372274 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
TMEM254-202ENST00000372274 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
TMEM254-202ENST00000372274 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
TMEM254-202ENST00000372274 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
TMEM254-202ENST00000372274 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
TMEM254-202ENST00000372274 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.89
TMEM254-202ENST00000372274 SOGA1O94964 1423 aa20.54■□□□□ 0.88
TMEM254-202ENST00000372274 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
TMEM254-202ENST00000372274 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
TMEM254-202ENST00000372274 CUX1P39880 1505 aa20.49■□□□□ 0.87
TMEM254-202ENST00000372274 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
TMEM254-202ENST00000372274 FBLN2P98095 1184 aa20.43■□□□□ 0.86
TMEM254-202ENST00000372274 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
TMEM254-202ENST00000372274 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
TMEM254-202ENST00000372274 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
TMEM254-202ENST00000372274 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
TMEM254-202ENST00000372274 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
TMEM254-202ENST00000372274 CHD1O14646 1710 aa20.38■□□□□ 0.85
TMEM254-202ENST00000372274 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
TMEM254-202ENST00000372274 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
TMEM254-202ENST00000372274 MAGI1Q96QZ7 1491 aaPredicted RBP20.32■□□□□ 0.84
TMEM254-202ENST00000372274 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
TMEM254-202ENST00000372274 ABCA10Q8WWZ4 1543 aa20.29■□□□□ 0.84
TMEM254-202ENST00000372274 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
TMEM254-202ENST00000372274 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.84
TMEM254-202ENST00000372274 SYNJ2O15056 1496 aa20.25■□□□□ 0.83
TMEM254-202ENST00000372274 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
TMEM254-202ENST00000372274 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
TMEM254-202ENST00000372274 CLASP1Q7Z460 1538 aa20.21■□□□□ 0.83
TMEM254-202ENST00000372274 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
TMEM254-202ENST00000372274 ARAP1Q96P48 1450 aa20.2■□□□□ 0.82
TMEM254-202ENST00000372274 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
TMEM254-202ENST00000372274 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
TMEM254-202ENST00000372274 BIVM-ERCC5R4GMW8 1640 aa20.18■□□□□ 0.82
TMEM254-202ENST00000372274 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
TMEM254-202ENST00000372274 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
TMEM254-202ENST00000372274 FHAD1B1AJZ9 1412 aa20.04■□□□□ 0.8
TMEM254-202ENST00000372274 ERICH3Q5RHP9 1530 aa20.03■□□□□ 0.8
TMEM254-202ENST00000372274 NUP160Q12769 1436 aa20.02■□□□□ 0.79
TMEM254-202ENST00000372274 TRHP20396 242 aaPredicted RBP19.99■□□□□ 0.79
TMEM254-202ENST00000372274 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
TMEM254-202ENST00000372274 ERCC6L2Q5T890 1561 aa19.89■□□□□ 0.77
TMEM254-202ENST00000372274 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
TMEM254-202ENST00000372274 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
TMEM254-202ENST00000372274 IGF1RP08069 1367 aa19.84■□□□□ 0.77
TMEM254-202ENST00000372274 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
TMEM254-202ENST00000372274 PRG4Q92954 1404 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms