RNA–Protein interactions for RNA: ENST00000372045.5

CHRDL1-202, Transcript of chordin like 1, humanhuman

TSL 1 (best) BASIC

Gene CHRDL1, Length 3,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1-202ENST00000372045 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
CHRDL1-202ENST00000372045 CCDC180Q9P1Z9 1646 aa12.26□□□□□ -0.45
CHRDL1-202ENST00000372045 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
CHRDL1-202ENST00000372045 ABCC9O60706 1549 aa11.55□□□□□ -0.56
CHRDL1-202ENST00000372045 DCAF1Q9Y4B6 1507 aa11.53□□□□□ -0.56
CHRDL1-202ENST00000372045 MYO15BQ96JP2 1530 aa11.49□□□□□ -0.57
CHRDL1-202ENST00000372045 NACADO15069 1562 aa11.4□□□□□ -0.58
CHRDL1-202ENST00000372045 DCAF8L2P0C7V8 631 aa11.32□□□□□ -0.6
CHRDL1-202ENST00000372045 RB1CC1Q8TDY2 1594 aa11.31□□□□□ -0.6
CHRDL1-202ENST00000372045 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
CHRDL1-202ENST00000372045 SHROOM4Q9ULL8 1493 aa11.15□□□□□ -0.62
CHRDL1-202ENST00000372045 SCRIBQ14160 1630 aa11.1□□□□□ -0.63
CHRDL1-202ENST00000372045 BICRAQ9NZM4 1560 aa11.05□□□□□ -0.64
CHRDL1-202ENST00000372045 PABPN1Q86U42 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHRDL1-202ENST00000372045 CECR2Q9BXF3 1484 aa10.73□□□□□ -0.69
CHRDL1-202ENST00000372045 SUPT5HO00267 1087 aaKnown RBP10.72□□□□□ -0.69
CHRDL1-202ENST00000372045 RSF1Q96T23 1441 aaPredicted RBP10.72□□□□□ -0.69
CHRDL1-202ENST00000372045 SMARCA4P51532 1647 aa10.7□□□□□ -0.7
CHRDL1-202ENST00000372045 BAZ1AQ9NRL2 1556 aaPredicted RBP10.69□□□□□ -0.7
CHRDL1-202ENST00000372045 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
CHRDL1-202ENST00000372045 MROH2BQ7Z745 1585 aa10.67□□□□□ -0.7
CHRDL1-202ENST00000372045 PEG3Q9GZU2 1588 aa10.66□□□□□ -0.7
CHRDL1-202ENST00000372045 WIZO95785 1651 aa10.58□□□□□ -0.72
CHRDL1-202ENST00000372045 CC2D2AQ9P2K1 1620 aa10.55□□□□□ -0.72
CHRDL1-202ENST00000372045 ATAD2BQ9ULI0 1458 aa10.53□□□□□ -0.72
CHRDL1-202ENST00000372045 SMARCA2P51531 1590 aa10.53□□□□□ -0.72
CHRDL1-202ENST00000372045 HMGXB3Q12766 1538 aa10.51□□□□□ -0.73
CHRDL1-202ENST00000372045 NCAPD3P42695 1498 aa10.5□□□□□ -0.73
CHRDL1-202ENST00000372045 TOP2AP11388 1531 aaKnown RBP10.49□□□□□ -0.73
CHRDL1-202ENST00000372045 BAZ1BQ9UIG0 1483 aaKnown RBP10.42□□□□□ -0.74
CHRDL1-202ENST00000372045 DNAJC5BQ9UF47 199 aa10.37□□□□□ -0.75
CHRDL1-202ENST00000372045 CCDC88BA6NC98 1476 aa10.37□□□□□ -0.75
CHRDL1-202ENST00000372045 CHIC1Q5VXU3 224 aa10.31□□□□□ -0.76
CHRDL1-202ENST00000372045 PRDM2Q13029 1718 aa10.26□□□□□ -0.77
CHRDL1-202ENST00000372045 CFTRP13569 1480 aa10.21□□□□□ -0.78
CHRDL1-202ENST00000372045 LAMC3Q9Y6N6 1575 aa10.19□□□□□ -0.78
CHRDL1-202ENST00000372045 CADPSQ9ULU8 1353 aa10.15□□□□□ -0.78
CHRDL1-202ENST00000372045 TRIM41Q8WV44 630 aa10.13□□□□□ -0.79
CHRDL1-202ENST00000372045 NESP48681 1621 aa10.13□□□□□ -0.79
CHRDL1-202ENST00000372045 ABCC8Q09428 1581 aa10.1□□□□□ -0.79
CHRDL1-202ENST00000372045 KIF21AQ7Z4S6 1674 aa10.09□□□□□ -0.79
CHRDL1-202ENST00000372045 WRNQ14191 1432 aaPredicted RBP eCLIP10.07□□□□□ -0.8
CHRDL1-202ENST00000372045 FANCD2Q9BXW9 1451 aa10.05□□□□□ -0.8
CHRDL1-202ENST00000372045 BIVM-ERCC5R4GMW8 1640 aa10.03□□□□□ -0.8
CHRDL1-202ENST00000372045 SYNJ1O43426 1573 aa10.03□□□□□ -0.8
CHRDL1-202ENST00000372045 TOP2BQ02880 1626 aa10.02□□□□□ -0.81
CHRDL1-202ENST00000372045 PDS5BQ9NTI5 1447 aa10.02□□□□□ -0.81
CHRDL1-202ENST00000372045 THOC2Q8NI27 1593 aaKnown RBP10.01□□□□□ -0.81
CHRDL1-202ENST00000372045 CEP164Q9UPV0 1460 aa10□□□□□ -0.81
CHRDL1-202ENST00000372045 CUX1P39880 1505 aa10□□□□□ -0.81
CHRDL1-202ENST00000372045 DNMBPQ6XZF7 1577 aa9.98□□□□□ -0.81
CHRDL1-202ENST00000372045 WDR62O43379 1518 aa9.97□□□□□ -0.81
CHRDL1-202ENST00000372045 URB2Q14146 1524 aaKnown RBP9.97□□□□□ -0.81
CHRDL1-202ENST00000372045 MRC2Q9UBG0 1479 aa9.95□□□□□ -0.82
CHRDL1-202ENST00000372045 EEA1Q15075 1411 aa9.95□□□□□ -0.82
CHRDL1-202ENST00000372045 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
CHRDL1-202ENST00000372045 WDR97A6NE52 1622 aa9.92□□□□□ -0.82
CHRDL1-202ENST00000372045 SOGA1O94964 1423 aa9.92□□□□□ -0.82
CHRDL1-202ENST00000372045 ERCC6Q03468 1493 aa9.89□□□□□ -0.83
CHRDL1-202ENST00000372045 TARBP1Q13395 1621 aaKnown RBP9.88□□□□□ -0.83
CHRDL1-202ENST00000372045 RUSC2Q8N2Y8 1516 aa9.88□□□□□ -0.83
CHRDL1-202ENST00000372045 POLA1P09884 1462 aaPredicted RBP9.87□□□□□ -0.83
CHRDL1-202ENST00000372045 FGD5Q6ZNL6 1462 aa9.87□□□□□ -0.83
CHRDL1-202ENST00000372045 FAM9AQ8IZU1 332 aaPredicted RBP9.87□□□□□ -0.83
CHRDL1-202ENST00000372045 LOC105371045A0A1W2PR82 267 aa9.87□□□□□ -0.83
CHRDL1-202ENST00000372045 CUX2O14529 1486 aa9.86□□□□□ -0.83
CHRDL1-202ENST00000372045 CSRNP3Q8WYN3 585 aa9.86□□□□□ -0.83
CHRDL1-202ENST00000372045 ABCA10Q8WWZ4 1543 aa9.83□□□□□ -0.84
CHRDL1-202ENST00000372045 KIF27Q86VH2 1401 aa9.83□□□□□ -0.84
CHRDL1-202ENST00000372045 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
CHRDL1-202ENST00000372045 KIF21BO75037 1637 aa9.81□□□□□ -0.84
CHRDL1-202ENST00000372045 IFT140Q96RY7 1462 aa9.8□□□□□ -0.84
CHRDL1-202ENST00000372045 RAD54L2Q9Y4B4 1467 aa9.8□□□□□ -0.84
CHRDL1-202ENST00000372045 GOLGA3Q08378 1498 aa9.78□□□□□ -0.84
CHRDL1-202ENST00000372045 PRXQ9BXM0 1461 aa9.78□□□□□ -0.84
CHRDL1-202ENST00000372045 ERICH3Q5RHP9 1530 aa9.76□□□□□ -0.85
CHRDL1-202ENST00000372045 PBRM1Q86U86 1689 aa9.76□□□□□ -0.85
CHRDL1-202ENST00000372045 TNIKQ9UKE5 1360 aa9.76□□□□□ -0.85
CHRDL1-202ENST00000372045 IGF1RP08069 1367 aa9.75□□□□□ -0.85
CHRDL1-202ENST00000372045 EIF4G3O43432 1585 aaKnown RBP9.75□□□□□ -0.85
CHRDL1-202ENST00000372045 ZNF608Q9ULD9 1512 aaPredicted RBP9.73□□□□□ -0.85
CHRDL1-202ENST00000372045 RAPGEF2Q9Y4G8 1499 aa9.73□□□□□ -0.85
CHRDL1-202ENST00000372045 CUL7Q14999 1698 aa9.7□□□□□ -0.86
CHRDL1-202ENST00000372045 GAPVD1Q14C86 1478 aa9.7□□□□□ -0.86
CHRDL1-202ENST00000372045 CARMIL1Q5VZK9 1371 aa9.69□□□□□ -0.86
CHRDL1-202ENST00000372045 UBTFP17480 764 aaKnown RBP9.68□□□□□ -0.86
CHRDL1-202ENST00000372045 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
CHRDL1-202ENST00000372045 ADAMTS12P58397 1594 aa9.68□□□□□ -0.86
CHRDL1-202ENST00000372045 TDRD9Q8NDG6 1382 aaKnown RBP9.67□□□□□ -0.86
CHRDL1-202ENST00000372045 AQRO60306 1485 aaKnown RBP eCLIP9.67□□□□□ -0.86
CHRDL1-202ENST00000372045 CEP162Q5TB80 1403 aa9.67□□□□□ -0.86
CHRDL1-202ENST00000372045 GRIN2BQ13224 1484 aa9.66□□□□□ -0.86
CHRDL1-202ENST00000372045 MAGI1Q96QZ7 1491 aaPredicted RBP9.64□□□□□ -0.87
CHRDL1-202ENST00000372045 SNAPC4Q5SXM2 1469 aa9.62□□□□□ -0.87
CHRDL1-202ENST00000372045 FHAD1B1AJZ9 1412 aa9.6□□□□□ -0.87
CHRDL1-202ENST00000372045 CLIP1P30622 1438 aa9.6□□□□□ -0.87
CHRDL1-202ENST00000372045 SYNJ2O15056 1496 aa9.58□□□□□ -0.88
CHRDL1-202ENST00000372045 CHD1O14646 1710 aa9.58□□□□□ -0.88
CHRDL1-202ENST00000372045 CTTNBP2Q8WZ74 1663 aa9.58□□□□□ -0.88
CHRDL1-202ENST00000372045 GRIN2AQ12879 1464 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms