RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 NISCHQ9Y2I1 1504 aa41.79■■■■■ 4.28
CCDC17-201ENST00000372044 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
CCDC17-201ENST00000372044 ZCCHC6Q5VYS8 1495 aaKnown RBP35.09■■■■□ 3.21
CCDC17-201ENST00000372044 ABCC9O60706 1549 aa34.69■■■■□ 3.14
CCDC17-201ENST00000372044 DCAF8L2P0C7V8 631 aa34.53■■■■□ 3.12
CCDC17-201ENST00000372044 DCAF1Q9Y4B6 1507 aa34.48■■■■□ 3.11
CCDC17-201ENST00000372044 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
CCDC17-201ENST00000372044 SHROOM4Q9ULL8 1493 aa34.06■■■■□ 3.04
CCDC17-201ENST00000372044 NACADO15069 1562 aa33.99■■■■□ 3.03
CCDC17-201ENST00000372044 RB1CC1Q8TDY2 1594 aa33.76■■■□□ 2.99
CCDC17-201ENST00000372044 SCRIBQ14160 1630 aa33.66■■■□□ 2.98
CCDC17-201ENST00000372044 UNC13AQ9UPW8 1703 aa33.35■■■□□ 2.93
CCDC17-201ENST00000372044 BICRAQ9NZM4 1560 aa32.86■■■□□ 2.85
CCDC17-201ENST00000372044 PABPN1Q86U42 306 aaKnown RBP eCLIP32.67■■■□□ 2.82
CCDC17-201ENST00000372044 SUPT5HO00267 1087 aaKnown RBP32.63■■■□□ 2.81
CCDC17-201ENST00000372044 CECR2Q9BXF3 1484 aa32.55■■■□□ 2.8
CCDC17-201ENST00000372044 RSF1Q96T23 1441 aaPredicted RBP32.36■■■□□ 2.77
CCDC17-201ENST00000372044 MROH2BQ7Z745 1585 aa32.34■■■□□ 2.77
CCDC17-201ENST00000372044 BAZ1AQ9NRL2 1556 aaPredicted RBP32.25■■■□□ 2.75
CCDC17-201ENST00000372044 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
CCDC17-201ENST00000372044 WIZO95785 1651 aa32.14■■■□□ 2.74
CCDC17-201ENST00000372044 EIF4G1Q04637 1599 aaKnown RBP31.82■■■□□ 2.68
CCDC17-201ENST00000372044 PEG3Q9GZU2 1588 aa31.77■■■□□ 2.68
CCDC17-201ENST00000372044 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
CCDC17-201ENST00000372044 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
CCDC17-201ENST00000372044 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
CCDC17-201ENST00000372044 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.63
CCDC17-201ENST00000372044 CC2D2AQ9P2K1 1620 aa31.43■■■□□ 2.62
CCDC17-201ENST00000372044 CCDC88BA6NC98 1476 aa31.36■■■□□ 2.61
CCDC17-201ENST00000372044 NCAPD3P42695 1498 aa31.35■■■□□ 2.61
CCDC17-201ENST00000372044 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
CCDC17-201ENST00000372044 CHIC1Q5VXU3 224 aa31.14■■■□□ 2.58
CCDC17-201ENST00000372044 DNAJC5BQ9UF47 199 aa30.8■■■□□ 2.52
CCDC17-201ENST00000372044 ABCC8Q09428 1581 aa30.76■■■□□ 2.51
CCDC17-201ENST00000372044 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
CCDC17-201ENST00000372044 CFTRP13569 1480 aa30.65■■■□□ 2.5
CCDC17-201ENST00000372044 TRIM41Q8WV44 630 aa30.61■■■□□ 2.49
CCDC17-201ENST00000372044 CADPSQ9ULU8 1353 aa30.53■■■□□ 2.48
CCDC17-201ENST00000372044 NESP48681 1621 aa30.47■■■□□ 2.47
CCDC17-201ENST00000372044 SYNJ1O43426 1573 aa30.44■■■□□ 2.46
CCDC17-201ENST00000372044 WRNQ14191 1432 aaPredicted RBP eCLIP30.43■■■□□ 2.46
CCDC17-201ENST00000372044 LAMC3Q9Y6N6 1575 aa30.36■■■□□ 2.45
CCDC17-201ENST00000372044 BIVM-ERCC5R4GMW8 1640 aa30.28■■■□□ 2.44
CCDC17-201ENST00000372044 TOP2BQ02880 1626 aa30.27■■■□□ 2.44
CCDC17-201ENST00000372044 CUX1P39880 1505 aa30.25■■■□□ 2.43
CCDC17-201ENST00000372044 FANCD2Q9BXW9 1451 aa30.24■■■□□ 2.43
CCDC17-201ENST00000372044 KIF21AQ7Z4S6 1674 aa30.18■■■□□ 2.42
CCDC17-201ENST00000372044 FAM9AQ8IZU1 332 aaPredicted RBP30.15■■■□□ 2.42
CCDC17-201ENST00000372044 SOGA1O94964 1423 aa30.07■■■□□ 2.4
CCDC17-201ENST00000372044 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
CCDC17-201ENST00000372044 PDS5BQ9NTI5 1447 aa30.04■■■□□ 2.4
CCDC17-201ENST00000372044 RUSC2Q8N2Y8 1516 aa30.04■■■□□ 2.4
CCDC17-201ENST00000372044 LOC105371045A0A1W2PR82 267 aa30.02■■■□□ 2.4
CCDC17-201ENST00000372044 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
CCDC17-201ENST00000372044 URB2Q14146 1524 aaKnown RBP29.93■■■□□ 2.38
CCDC17-201ENST00000372044 TOPBP1Q92547 1522 aa29.93■■■□□ 2.38
CCDC17-201ENST00000372044 FGD5Q6ZNL6 1462 aa29.9■■■□□ 2.38
CCDC17-201ENST00000372044 EEA1Q15075 1411 aa29.82■■■□□ 2.37
CCDC17-201ENST00000372044 EHMT2Q96KQ7 1210 aa29.8■■■□□ 2.36
CCDC17-201ENST00000372044 POLA1P09884 1462 aaPredicted RBP29.78■■■□□ 2.36
CCDC17-201ENST00000372044 MRC2Q9UBG0 1479 aa29.72■■■□□ 2.35
CCDC17-201ENST00000372044 CSRNP3Q8WYN3 585 aa29.72■■■□□ 2.35
CCDC17-201ENST00000372044 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
CCDC17-201ENST00000372044 ERCC6Q03468 1493 aa29.68■■■□□ 2.34
CCDC17-201ENST00000372044 WDR97A6NE52 1622 aa29.66■■■□□ 2.34
CCDC17-201ENST00000372044 CUX2O14529 1486 aa29.65■■■□□ 2.34
CCDC17-201ENST00000372044 THOC2Q8NI27 1593 aaKnown RBP29.64■■■□□ 2.34
CCDC17-201ENST00000372044 KIF27Q86VH2 1401 aa29.63■■■□□ 2.33
CCDC17-201ENST00000372044 WDR62O43379 1518 aa29.62■■■□□ 2.33
CCDC17-201ENST00000372044 KIF21BO75037 1637 aa29.6■■■□□ 2.33
CCDC17-201ENST00000372044 ABCA10Q8WWZ4 1543 aa29.59■■■□□ 2.33
CCDC17-201ENST00000372044 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
CCDC17-201ENST00000372044 GOLGA3Q08378 1498 aa29.49■■■□□ 2.31
CCDC17-201ENST00000372044 RAPGEF2Q9Y4G8 1499 aa29.47■■■□□ 2.31
CCDC17-201ENST00000372044 ABCA5Q8WWZ7 1642 aa29.46■■■□□ 2.31
CCDC17-201ENST00000372044 PRXQ9BXM0 1461 aa29.45■■■□□ 2.3
CCDC17-201ENST00000372044 IGF1RP08069 1367 aa29.42■■■□□ 2.3
CCDC17-201ENST00000372044 TDRD9Q8NDG6 1382 aaKnown RBP29.38■■■□□ 2.29
CCDC17-201ENST00000372044 ERICH3Q5RHP9 1530 aa29.38■■■□□ 2.29
CCDC17-201ENST00000372044 UBTFP17480 764 aaKnown RBP29.34■■■□□ 2.29
CCDC17-201ENST00000372044 TNIKQ9UKE5 1360 aa29.34■■■□□ 2.29
CCDC17-201ENST00000372044 PBRM1Q86U86 1689 aa29.32■■■□□ 2.28
CCDC17-201ENST00000372044 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
CCDC17-201ENST00000372044 IFT140Q96RY7 1462 aa29.31■■■□□ 2.28
CCDC17-201ENST00000372044 ZNF608Q9ULD9 1512 aaPredicted RBP29.28■■■□□ 2.28
CCDC17-201ENST00000372044 CUL7Q14999 1698 aa29.27■■■□□ 2.28
CCDC17-201ENST00000372044 CARMIL1Q5VZK9 1371 aa29.25■■■□□ 2.27
CCDC17-201ENST00000372044 AQRO60306 1485 aaKnown RBP eCLIP29.25■■■□□ 2.27
CCDC17-201ENST00000372044 CEP162Q5TB80 1403 aa29.23■■■□□ 2.27
CCDC17-201ENST00000372044 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
CCDC17-201ENST00000372044 GRIN2BQ13224 1484 aa29.07■■■□□ 2.24
CCDC17-201ENST00000372044 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
CCDC17-201ENST00000372044 CTTNBP2Q8WZ74 1663 aa29.03■■■□□ 2.24
CCDC17-201ENST00000372044 CLIP1P30622 1438 aa29.02■■■□□ 2.24
CCDC17-201ENST00000372044 RANGAP1P46060 587 aaPredicted RBP29.01■■■□□ 2.23
CCDC17-201ENST00000372044 SNAPC4Q5SXM2 1469 aa28.97■■■□□ 2.23
CCDC17-201ENST00000372044 FHAD1B1AJZ9 1412 aa28.95■■■□□ 2.22
CCDC17-201ENST00000372044 MAGI1Q96QZ7 1491 aaPredicted RBP28.85■■■□□ 2.21
CCDC17-201ENST00000372044 ARHGAP35Q9NRY4 1499 aa28.84■■■□□ 2.21
CCDC17-201ENST00000372044 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms