RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
TTC39A-204ENST00000371750 CCDC180Q9P1Z9 1646 aa27.42■■□□□ 1.98
TTC39A-204ENST00000371750 ABCC9O60706 1549 aa26.36■■□□□ 1.81
TTC39A-204ENST00000371750 ZCCHC6Q5VYS8 1495 aaKnown RBP25.99■■□□□ 1.75
TTC39A-204ENST00000371750 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
TTC39A-204ENST00000371750 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
TTC39A-204ENST00000371750 NACADO15069 1562 aa25.61■■□□□ 1.69
TTC39A-204ENST00000371750 MYO15BQ96JP2 1530 aa25.59■■□□□ 1.69
TTC39A-204ENST00000371750 RB1CC1Q8TDY2 1594 aa25.54■■□□□ 1.68
TTC39A-204ENST00000371750 SCRIBQ14160 1630 aa25.1■■□□□ 1.61
TTC39A-204ENST00000371750 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
TTC39A-204ENST00000371750 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
TTC39A-204ENST00000371750 BICRAQ9NZM4 1560 aa24.79■■□□□ 1.56
TTC39A-204ENST00000371750 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
TTC39A-204ENST00000371750 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
TTC39A-204ENST00000371750 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
TTC39A-204ENST00000371750 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
TTC39A-204ENST00000371750 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
TTC39A-204ENST00000371750 MROH2BQ7Z745 1585 aa23.96■■□□□ 1.43
TTC39A-204ENST00000371750 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
TTC39A-204ENST00000371750 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
TTC39A-204ENST00000371750 WIZO95785 1651 aa23.75■■□□□ 1.39
TTC39A-204ENST00000371750 PEG3Q9GZU2 1588 aa23.75■■□□□ 1.39
TTC39A-204ENST00000371750 ATAD2BQ9ULI0 1458 aa23.72■■□□□ 1.39
TTC39A-204ENST00000371750 SMARCA2P51531 1590 aa23.72■■□□□ 1.39
TTC39A-204ENST00000371750 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
TTC39A-204ENST00000371750 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
TTC39A-204ENST00000371750 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
TTC39A-204ENST00000371750 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
TTC39A-204ENST00000371750 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
TTC39A-204ENST00000371750 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
TTC39A-204ENST00000371750 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
TTC39A-204ENST00000371750 NESP48681 1621 aa22.97■■□□□ 1.27
TTC39A-204ENST00000371750 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
TTC39A-204ENST00000371750 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
TTC39A-204ENST00000371750 CFTRP13569 1480 aa22.92■■□□□ 1.26
TTC39A-204ENST00000371750 PRDM2Q13029 1718 aa22.89■■□□□ 1.26
TTC39A-204ENST00000371750 KIF21AQ7Z4S6 1674 aa22.75■■□□□ 1.23
TTC39A-204ENST00000371750 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
TTC39A-204ENST00000371750 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
TTC39A-204ENST00000371750 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
TTC39A-204ENST00000371750 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
TTC39A-204ENST00000371750 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
TTC39A-204ENST00000371750 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
TTC39A-204ENST00000371750 MRC2Q9UBG0 1479 aa22.52■■□□□ 1.19
TTC39A-204ENST00000371750 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
TTC39A-204ENST00000371750 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
TTC39A-204ENST00000371750 CUX1P39880 1505 aa22.45■■□□□ 1.18
TTC39A-204ENST00000371750 WDR62O43379 1518 aa22.45■■□□□ 1.18
TTC39A-204ENST00000371750 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
TTC39A-204ENST00000371750 SYNJ1O43426 1573 aa22.44■■□□□ 1.18
TTC39A-204ENST00000371750 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
TTC39A-204ENST00000371750 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
TTC39A-204ENST00000371750 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
TTC39A-204ENST00000371750 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
TTC39A-204ENST00000371750 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.15
TTC39A-204ENST00000371750 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
TTC39A-204ENST00000371750 CUX2O14529 1486 aa22.22■■□□□ 1.15
TTC39A-204ENST00000371750 TRIM41Q8WV44 630 aa22.18■■□□□ 1.14
TTC39A-204ENST00000371750 RAD54L2Q9Y4B4 1467 aa22.17■■□□□ 1.14
TTC39A-204ENST00000371750 TARBP1Q13395 1621 aaKnown RBP22.16■■□□□ 1.14
TTC39A-204ENST00000371750 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
TTC39A-204ENST00000371750 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
TTC39A-204ENST00000371750 SOGA1O94964 1423 aa22.13■■□□□ 1.13
TTC39A-204ENST00000371750 ABCA10Q8WWZ4 1543 aa22.07■■□□□ 1.12
TTC39A-204ENST00000371750 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
TTC39A-204ENST00000371750 EIF4G3O43432 1585 aaKnown RBP22.01■■□□□ 1.11
TTC39A-204ENST00000371750 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
TTC39A-204ENST00000371750 TDRD9Q8NDG6 1382 aaKnown RBP21.96■■□□□ 1.11
TTC39A-204ENST00000371750 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.1
TTC39A-204ENST00000371750 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
TTC39A-204ENST00000371750 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
TTC39A-204ENST00000371750 KIF27Q86VH2 1401 aa21.91■■□□□ 1.1
TTC39A-204ENST00000371750 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
TTC39A-204ENST00000371750 GRIN2BQ13224 1484 aa21.83■■□□□ 1.09
TTC39A-204ENST00000371750 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
TTC39A-204ENST00000371750 EEA1Q15075 1411 aa21.8■■□□□ 1.08
TTC39A-204ENST00000371750 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
TTC39A-204ENST00000371750 FAM9AQ8IZU1 332 aaPredicted RBP21.77■■□□□ 1.07
TTC39A-204ENST00000371750 ADAMTS12P58397 1594 aa21.76■■□□□ 1.07
TTC39A-204ENST00000371750 CUL7Q14999 1698 aa21.75■■□□□ 1.07
TTC39A-204ENST00000371750 IGF1RP08069 1367 aa21.74■■□□□ 1.07
TTC39A-204ENST00000371750 MAGI1Q96QZ7 1491 aaPredicted RBP21.73■■□□□ 1.07
TTC39A-204ENST00000371750 CSRNP3Q8WYN3 585 aa21.67■■□□□ 1.06
TTC39A-204ENST00000371750 FHAD1B1AJZ9 1412 aa21.66■■□□□ 1.06
TTC39A-204ENST00000371750 CHD1O14646 1710 aa21.65■■□□□ 1.06
TTC39A-204ENST00000371750 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
TTC39A-204ENST00000371750 PRXQ9BXM0 1461 aa21.64■■□□□ 1.05
TTC39A-204ENST00000371750 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
TTC39A-204ENST00000371750 KIF21BO75037 1637 aa21.62■■□□□ 1.05
TTC39A-204ENST00000371750 RAPGEF2Q9Y4G8 1499 aa21.59■■□□□ 1.05
TTC39A-204ENST00000371750 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
TTC39A-204ENST00000371750 FBLN2P98095 1184 aa21.53■■□□□ 1.04
TTC39A-204ENST00000371750 CHMP7Q8WUX9 453 aaPredicted RBP21.53■■□□□ 1.04
TTC39A-204ENST00000371750 GOLGA3Q08378 1498 aa21.5■■□□□ 1.03
TTC39A-204ENST00000371750 CEP170Q5SW79 1584 aa21.49■■□□□ 1.03
TTC39A-204ENST00000371750 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
TTC39A-204ENST00000371750 CTTNBP2Q8WZ74 1663 aa21.45■■□□□ 1.02
TTC39A-204ENST00000371750 NUP160Q12769 1436 aa21.45■■□□□ 1.02
TTC39A-204ENST00000371750 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms