RNA–Protein interactions for RNA: ENST00000371720.5

PMPCA-202, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 4

Gene PMPCA, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-202ENST00000371720 NISCHQ9Y2I1 1504 aa51.96■■■■■ 5.91
PMPCA-202ENST00000371720 CCDC180Q9P1Z9 1646 aa46.35■■■■■ 5.01
PMPCA-202ENST00000371720 ABCC9O60706 1549 aa44.8■■■■■ 4.76
PMPCA-202ENST00000371720 NACADO15069 1562 aa43.44■■■■■ 4.54
PMPCA-202ENST00000371720 RB1CC1Q8TDY2 1594 aa43.41■■■■■ 4.54
PMPCA-202ENST00000371720 ZCCHC6Q5VYS8 1495 aaKnown RBP43.38■■■■■ 4.54
PMPCA-202ENST00000371720 MYO15BQ96JP2 1530 aa43.38■■■■■ 4.53
PMPCA-202ENST00000371720 DCAF1Q9Y4B6 1507 aa43.2■■■■■ 4.51
PMPCA-202ENST00000371720 DCAF8L2P0C7V8 631 aa42.85■■■■■ 4.45
PMPCA-202ENST00000371720 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
PMPCA-202ENST00000371720 BICRAQ9NZM4 1560 aa42.06■■■■■ 4.32
PMPCA-202ENST00000371720 SCRIBQ14160 1630 aa42■■■■■ 4.31
PMPCA-202ENST00000371720 SHROOM4Q9ULL8 1493 aa41.89■■■■■ 4.3
PMPCA-202ENST00000371720 PABPN1Q86U42 306 aaKnown RBP eCLIP41.72■■■■■ 4.27
PMPCA-202ENST00000371720 EIF4G1Q04637 1599 aaKnown RBP40.94■■■■■ 4.14
PMPCA-202ENST00000371720 DNAJC5BQ9UF47 199 aa40.86■■■■■ 4.13
PMPCA-202ENST00000371720 CC2D2AQ9P2K1 1620 aa40.69■■■■■ 4.1
PMPCA-202ENST00000371720 SMARCA4P51532 1647 aa40.33■■■■■ 4.05
PMPCA-202ENST00000371720 CECR2Q9BXF3 1484 aa40.32■■■■■ 4.05
PMPCA-202ENST00000371720 BAZ1AQ9NRL2 1556 aaPredicted RBP40.32■■■■■ 4.05
PMPCA-202ENST00000371720 SMARCA2P51531 1590 aa40.06■■■■■ 4
PMPCA-202ENST00000371720 PEG3Q9GZU2 1588 aa40.06■■■■■ 4
PMPCA-202ENST00000371720 NCAPD3P42695 1498 aa40.01■■■■■ 4
PMPCA-202ENST00000371720 ATAD2BQ9ULI0 1458 aa40■■■■□ 3.99
PMPCA-202ENST00000371720 MROH2BQ7Z745 1585 aa39.97■■■■□ 3.99
PMPCA-202ENST00000371720 HMGXB3Q12766 1538 aa39.94■■■■□ 3.98
PMPCA-202ENST00000371720 BAZ1BQ9UIG0 1483 aaKnown RBP39.67■■■■□ 3.94
PMPCA-202ENST00000371720 RSF1Q96T23 1441 aaPredicted RBP39.56■■■■□ 3.92
PMPCA-202ENST00000371720 WIZO95785 1651 aa39.55■■■■□ 3.92
PMPCA-202ENST00000371720 TOP2AP11388 1531 aaKnown RBP39.25■■■■□ 3.87
PMPCA-202ENST00000371720 LAMC3Q9Y6N6 1575 aa39.01■■■■□ 3.84
PMPCA-202ENST00000371720 NESP48681 1621 aa38.82■■■■□ 3.81
PMPCA-202ENST00000371720 CADPSQ9ULU8 1353 aa38.77■■■■□ 3.8
PMPCA-202ENST00000371720 CCDC88BA6NC98 1476 aa38.65■■■■□ 3.78
PMPCA-202ENST00000371720 CFTRP13569 1480 aa38.65■■■■□ 3.78
PMPCA-202ENST00000371720 ERCC6Q03468 1493 aa38.65■■■■□ 3.78
PMPCA-202ENST00000371720 PDS5BQ9NTI5 1447 aa38.62■■■■□ 3.77
PMPCA-202ENST00000371720 PRDM2Q13029 1718 aa38.57■■■■□ 3.76
PMPCA-202ENST00000371720 KIF21AQ7Z4S6 1674 aa38.54■■■■□ 3.76
PMPCA-202ENST00000371720 THOC2Q8NI27 1593 aaKnown RBP38.44■■■■□ 3.74
PMPCA-202ENST00000371720 CUX2O14529 1486 aa38.39■■■■□ 3.74
PMPCA-202ENST00000371720 FANCD2Q9BXW9 1451 aa38.33■■■■□ 3.73
PMPCA-202ENST00000371720 SUPT5HO00267 1087 aaKnown RBP38.32■■■■□ 3.72
PMPCA-202ENST00000371720 CEP164Q9UPV0 1460 aa38.3■■■■□ 3.72
PMPCA-202ENST00000371720 MRC2Q9UBG0 1479 aa38.23■■■■□ 3.71
PMPCA-202ENST00000371720 WDR62O43379 1518 aa38.18■■■■□ 3.7
PMPCA-202ENST00000371720 URB2Q14146 1524 aaKnown RBP37.93■■■■□ 3.66
PMPCA-202ENST00000371720 ABCC8Q09428 1581 aa37.87■■■■□ 3.65
PMPCA-202ENST00000371720 DNMBPQ6XZF7 1577 aa37.8■■■■□ 3.64
PMPCA-202ENST00000371720 TOPBP1Q92547 1522 aa37.76■■■■□ 3.63
PMPCA-202ENST00000371720 DNAJC5Q9H3Z4 198 aa37.57■■■■□ 3.6
PMPCA-202ENST00000371720 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
PMPCA-202ENST00000371720 CUX1P39880 1505 aa37.51■■■■□ 3.59
PMPCA-202ENST00000371720 POLA1P09884 1462 aaPredicted RBP37.45■■■■□ 3.59
PMPCA-202ENST00000371720 TARBP1Q13395 1621 aaKnown RBP37.41■■■■□ 3.58
PMPCA-202ENST00000371720 BIVM-ERCC5R4GMW8 1640 aa37.37■■■■□ 3.57
PMPCA-202ENST00000371720 FGD5Q6ZNL6 1462 aa37.34■■■■□ 3.57
PMPCA-202ENST00000371720 TOP2BQ02880 1626 aa37.33■■■■□ 3.57
PMPCA-202ENST00000371720 WDR97A6NE52 1622 aa37.32■■■■□ 3.56
PMPCA-202ENST00000371720 WRNQ14191 1432 aaPredicted RBP eCLIP37.3■■■■□ 3.56
PMPCA-202ENST00000371720 SYNJ1O43426 1573 aa37.23■■■■□ 3.55
PMPCA-202ENST00000371720 EIF4G3O43432 1585 aaKnown RBP37.22■■■■□ 3.55
PMPCA-202ENST00000371720 ZNF608Q9ULD9 1512 aaPredicted RBP37.2■■■■□ 3.55
PMPCA-202ENST00000371720 SOGA1O94964 1423 aa37.2■■■■□ 3.55
PMPCA-202ENST00000371720 RAD54L2Q9Y4B4 1467 aa37.14■■■■□ 3.54
PMPCA-202ENST00000371720 ABCA10Q8WWZ4 1543 aa37.09■■■■□ 3.53
PMPCA-202ENST00000371720 ABCA5Q8WWZ7 1642 aa36.98■■■■□ 3.51
PMPCA-202ENST00000371720 AQRO60306 1485 aaKnown RBP eCLIP36.97■■■■□ 3.517e-8■■■□□ 17.6
PMPCA-202ENST00000371720 TDRD9Q8NDG6 1382 aaKnown RBP36.89■■■■□ 3.5
PMPCA-202ENST00000371720 PBRM1Q86U86 1689 aa36.88■■■■□ 3.49
PMPCA-202ENST00000371720 GRIN2BQ13224 1484 aa36.85■■■■□ 3.49
PMPCA-202ENST00000371720 GAPVD1Q14C86 1478 aa36.84■■■■□ 3.49
PMPCA-202ENST00000371720 MAGI1Q96QZ7 1491 aaPredicted RBP36.81■■■■□ 3.48
PMPCA-202ENST00000371720 SNAPC4Q5SXM2 1469 aa36.73■■■■□ 3.47
PMPCA-202ENST00000371720 CHD1O14646 1710 aa36.71■■■■□ 3.47
PMPCA-202ENST00000371720 ERICH3Q5RHP9 1530 aa36.69■■■■□ 3.46
PMPCA-202ENST00000371720 SYNJ2O15056 1496 aa36.62■■■■□ 3.45
PMPCA-202ENST00000371720 ADAMTS12P58397 1594 aa36.58■■■■□ 3.45
PMPCA-202ENST00000371720 OSCARQ8IYS5 282 aa36.58■■■■□ 3.45
PMPCA-202ENST00000371720 KIF27Q86VH2 1401 aa36.52■■■■□ 3.44
PMPCA-202ENST00000371720 FHAD1B1AJZ9 1412 aa36.45■■■■□ 3.43
PMPCA-202ENST00000371720 CUL7Q14999 1698 aa36.42■■■■□ 3.42
PMPCA-202ENST00000371720 GRIN2AQ12879 1464 aa36.38■■■■□ 3.41
PMPCA-202ENST00000371720 CHMP7Q8WUX9 453 aaPredicted RBP36.38■■■■□ 3.41
PMPCA-202ENST00000371720 CLASP1Q7Z460 1538 aa36.36■■■■□ 3.41
PMPCA-202ENST00000371720 FBLN2P98095 1184 aa36.32■■■■□ 3.4
PMPCA-202ENST00000371720 TRIM41Q8WV44 630 aa36.31■■■■□ 3.4
PMPCA-202ENST00000371720 IGF1RP08069 1367 aa36.29■■■■□ 3.4
PMPCA-202ENST00000371720 NUP160Q12769 1436 aa36.25■■■■□ 3.39
PMPCA-202ENST00000371720 CEP170Q5SW79 1584 aa36.19■■■■□ 3.38
PMPCA-202ENST00000371720 ARHGEF11O15085 1522 aa36.13■■■■□ 3.38
PMPCA-202ENST00000371720 RIMBP3CA6NJZ7 1639 aa36.12■■■■□ 3.37
PMPCA-202ENST00000371720 RIMBP3BA6NNM3 1639 aa36.12■■■■□ 3.37
PMPCA-202ENST00000371720 RIMBP3Q9UFD9 1639 aa36.12■■■■□ 3.37
PMPCA-202ENST00000371720 RUSC2Q8N2Y8 1516 aa36.08■■■■□ 3.37
PMPCA-202ENST00000371720 CARMIL1Q5VZK9 1371 aa36.07■■■■□ 3.36
PMPCA-202ENST00000371720 SHROOM2Q13796 1616 aa36.05■■■■□ 3.36
PMPCA-202ENST00000371720 EEA1Q15075 1411 aa36.03■■■■□ 3.36
PMPCA-202ENST00000371720 CHIC1Q5VXU3 224 aa35.98■■■■□ 3.35
PMPCA-202ENST00000371720 RAPGEF2Q9Y4G8 1499 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms