RNA–Protein interactions for RNA: ENST00000371539.7

SALL4-202, Transcript of spalt like transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene SALL4, Length 1,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4-202ENST00000371539 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
SALL4-202ENST00000371539 ABCC9O60706 1549 aa23.99■■□□□ 1.43
SALL4-202ENST00000371539 CCDC180Q9P1Z9 1646 aa23.9■■□□□ 1.42
SALL4-202ENST00000371539 RB1CC1Q8TDY2 1594 aa22.78■■□□□ 1.24
SALL4-202ENST00000371539 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
SALL4-202ENST00000371539 NACADO15069 1562 aa22.62■■□□□ 1.21
SALL4-202ENST00000371539 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
SALL4-202ENST00000371539 MYO15BQ96JP2 1530 aa22.32■■□□□ 1.16
SALL4-202ENST00000371539 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
SALL4-202ENST00000371539 UNC13AQ9UPW8 1703 aa22.27■■□□□ 1.16
SALL4-202ENST00000371539 BICRAQ9NZM4 1560 aa22.19■■□□□ 1.14
SALL4-202ENST00000371539 ZCCHC6Q5VYS8 1495 aaKnown RBP22.06■■□□□ 1.12
SALL4-202ENST00000371539 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
SALL4-202ENST00000371539 SHROOM4Q9ULL8 1493 aa21.86■■□□□ 1.09
SALL4-202ENST00000371539 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
SALL4-202ENST00000371539 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
SALL4-202ENST00000371539 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
SALL4-202ENST00000371539 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
SALL4-202ENST00000371539 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
SALL4-202ENST00000371539 ATAD2BQ9ULI0 1458 aa20.83■□□□□ 0.93
SALL4-202ENST00000371539 DNAJC5Q9H3Z4 198 aa20.81■□□□□ 0.92
SALL4-202ENST00000371539 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
SALL4-202ENST00000371539 HMGXB3Q12766 1538 aa20.74■□□□□ 0.91
SALL4-202ENST00000371539 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
SALL4-202ENST00000371539 CUX2O14529 1486 aa20.71■□□□□ 0.91
SALL4-202ENST00000371539 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
SALL4-202ENST00000371539 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
SALL4-202ENST00000371539 NESP48681 1621 aa20.6■□□□□ 0.89
SALL4-202ENST00000371539 PEG3Q9GZU2 1588 aa20.6■□□□□ 0.89
SALL4-202ENST00000371539 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
SALL4-202ENST00000371539 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
SALL4-202ENST00000371539 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
SALL4-202ENST00000371539 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
SALL4-202ENST00000371539 KIF21AQ7Z4S6 1674 aa20.3■□□□□ 0.84
SALL4-202ENST00000371539 PDS5BQ9NTI5 1447 aa20.29■□□□□ 0.84
SALL4-202ENST00000371539 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
SALL4-202ENST00000371539 WIZO95785 1651 aa20.23■□□□□ 0.83
SALL4-202ENST00000371539 MRC2Q9UBG0 1479 aa20.15■□□□□ 0.82
SALL4-202ENST00000371539 WDR62O43379 1518 aa20.12■□□□□ 0.81
SALL4-202ENST00000371539 RSF1Q96T23 1441 aaPredicted RBP20.07■□□□□ 0.8
SALL4-202ENST00000371539 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
SALL4-202ENST00000371539 CFTRP13569 1480 aa20.03■□□□□ 0.8
SALL4-202ENST00000371539 FANCD2Q9BXW9 1451 aa20.02■□□□□ 0.8
SALL4-202ENST00000371539 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
SALL4-202ENST00000371539 URB2Q14146 1524 aaKnown RBP19.88■□□□□ 0.77
SALL4-202ENST00000371539 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
SALL4-202ENST00000371539 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
SALL4-202ENST00000371539 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
SALL4-202ENST00000371539 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
SALL4-202ENST00000371539 IFT140Q96RY7 1462 aa19.65■□□□□ 0.74
SALL4-202ENST00000371539 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
SALL4-202ENST00000371539 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
SALL4-202ENST00000371539 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
SALL4-202ENST00000371539 DNMBPQ6XZF7 1577 aa19.55■□□□□ 0.72
SALL4-202ENST00000371539 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.71
SALL4-202ENST00000371539 RIMBP3CA6NJZ7 1639 aa19.5■□□□□ 0.71
SALL4-202ENST00000371539 RIMBP3BA6NNM3 1639 aa19.5■□□□□ 0.71
SALL4-202ENST00000371539 RIMBP3Q9UFD9 1639 aa19.5■□□□□ 0.71
SALL4-202ENST00000371539 TARBP1Q13395 1621 aaKnown RBP19.48■□□□□ 0.71
SALL4-202ENST00000371539 ARHGEF11O15085 1522 aa19.45■□□□□ 0.7
SALL4-202ENST00000371539 AQRO60306 1485 aaKnown RBP eCLIP19.44■□□□□ 0.7
SALL4-202ENST00000371539 POLA1P09884 1462 aaPredicted RBP19.44■□□□□ 0.7
SALL4-202ENST00000371539 RAD54L2Q9Y4B4 1467 aa19.36■□□□□ 0.69
SALL4-202ENST00000371539 CHD1O14646 1710 aa19.36■□□□□ 0.69
SALL4-202ENST00000371539 SOGA1O94964 1423 aa19.32■□□□□ 0.68
SALL4-202ENST00000371539 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
SALL4-202ENST00000371539 FGD5Q6ZNL6 1462 aa19.29■□□□□ 0.68
SALL4-202ENST00000371539 CUX1P39880 1505 aa19.28■□□□□ 0.68
SALL4-202ENST00000371539 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
SALL4-202ENST00000371539 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
SALL4-202ENST00000371539 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
SALL4-202ENST00000371539 FBLN2P98095 1184 aa19.25■□□□□ 0.67
SALL4-202ENST00000371539 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
SALL4-202ENST00000371539 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
SALL4-202ENST00000371539 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
SALL4-202ENST00000371539 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
SALL4-202ENST00000371539 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
SALL4-202ENST00000371539 CHMP7Q8WUX9 453 aaPredicted RBP19.12■□□□□ 0.65
SALL4-202ENST00000371539 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
SALL4-202ENST00000371539 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
SALL4-202ENST00000371539 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
SALL4-202ENST00000371539 PBRM1Q86U86 1689 aa19.06■□□□□ 0.64
SALL4-202ENST00000371539 ABCA5Q8WWZ7 1642 aa19.06■□□□□ 0.64
SALL4-202ENST00000371539 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
SALL4-202ENST00000371539 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
SALL4-202ENST00000371539 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
SALL4-202ENST00000371539 GRIN2AQ12879 1464 aa18.93■□□□□ 0.62
SALL4-202ENST00000371539 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
SALL4-202ENST00000371539 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
SALL4-202ENST00000371539 ADAMTS12P58397 1594 aa18.92■□□□□ 0.62
SALL4-202ENST00000371539 NUP160Q12769 1436 aa18.91■□□□□ 0.62
SALL4-202ENST00000371539 ERCC6L2Q5T890 1561 aa18.89■□□□□ 0.61
SALL4-202ENST00000371539 CEP170Q5SW79 1584 aa18.88■□□□□ 0.61
SALL4-202ENST00000371539 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
SALL4-202ENST00000371539 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
SALL4-202ENST00000371539 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
SALL4-202ENST00000371539 PRG4Q92954 1404 aaPredicted RBP18.68■□□□□ 0.58
SALL4-202ENST00000371539 RUSC2Q8N2Y8 1516 aa18.65■□□□□ 0.58
SALL4-202ENST00000371539 JPH4Q96JJ6 628 aa18.65■□□□□ 0.58
SALL4-202ENST00000371539 IGF1RP08069 1367 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 631.5 ms