RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 NISCHQ9Y2I1 1504 aa42.28■■■■■ 4.36
LRRC42-202ENST00000371368 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.64
LRRC42-202ENST00000371368 ABCC9O60706 1549 aa37.5■■■■□ 3.59
LRRC42-202ENST00000371368 RB1CC1Q8TDY2 1594 aa35.81■■■■□ 3.32
LRRC42-202ENST00000371368 NACADO15069 1562 aa35.65■■■■□ 3.3
LRRC42-202ENST00000371368 DCAF8L2P0C7V8 631 aa35.63■■■■□ 3.29
LRRC42-202ENST00000371368 MYO15BQ96JP2 1530 aa35.26■■■■□ 3.23
LRRC42-202ENST00000371368 ZCCHC6Q5VYS8 1495 aaKnown RBP35.09■■■■□ 3.21
LRRC42-202ENST00000371368 PABPN1Q86U42 306 aaKnown RBP eCLIP35■■■■□ 3.19
LRRC42-202ENST00000371368 UNC13AQ9UPW8 1703 aa34.97■■■■□ 3.19
LRRC42-202ENST00000371368 DCAF1Q9Y4B6 1507 aa34.93■■■■□ 3.18
LRRC42-202ENST00000371368 DNAJC5BQ9UF47 199 aa34.93■■■■□ 3.18
LRRC42-202ENST00000371368 BICRAQ9NZM4 1560 aa34.76■■■■□ 3.16
LRRC42-202ENST00000371368 SCRIBQ14160 1630 aa34.44■■■■□ 3.1
LRRC42-202ENST00000371368 SHROOM4Q9ULL8 1493 aa34.29■■■■□ 3.08
LRRC42-202ENST00000371368 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
LRRC42-202ENST00000371368 CC2D2AQ9P2K1 1620 aa33.86■■■■□ 3.01
LRRC42-202ENST00000371368 CECR2Q9BXF3 1484 aa33.74■■■□□ 2.99
LRRC42-202ENST00000371368 NCAPD3P42695 1498 aa32.93■■■□□ 2.86
LRRC42-202ENST00000371368 SMARCA4P51532 1647 aa32.9■■■□□ 2.86
LRRC42-202ENST00000371368 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
LRRC42-202ENST00000371368 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
LRRC42-202ENST00000371368 SMARCA2P51531 1590 aa32.78■■■□□ 2.84
LRRC42-202ENST00000371368 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
LRRC42-202ENST00000371368 MROH2BQ7Z745 1585 aa32.58■■■□□ 2.81
LRRC42-202ENST00000371368 PEG3Q9GZU2 1588 aa32.58■■■□□ 2.81
LRRC42-202ENST00000371368 BAZ1BQ9UIG0 1483 aaKnown RBP32.55■■■□□ 2.8
LRRC42-202ENST00000371368 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
LRRC42-202ENST00000371368 NESP48681 1621 aa32.3■■■□□ 2.76
LRRC42-202ENST00000371368 WIZO95785 1651 aa32.21■■■□□ 2.75
LRRC42-202ENST00000371368 CUX2O14529 1486 aa32.16■■■□□ 2.74
LRRC42-202ENST00000371368 LAMC3Q9Y6N6 1575 aa32.11■■■□□ 2.73
LRRC42-202ENST00000371368 RSF1Q96T23 1441 aaPredicted RBP32.04■■■□□ 2.72
LRRC42-202ENST00000371368 CADPSQ9ULU8 1353 aa31.95■■■□□ 2.71
LRRC42-202ENST00000371368 PDS5BQ9NTI5 1447 aa31.94■■■□□ 2.7
LRRC42-202ENST00000371368 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
LRRC42-202ENST00000371368 THOC2Q8NI27 1593 aaKnown RBP31.86■■■□□ 2.69
LRRC42-202ENST00000371368 DNAJC5Q9H3Z4 198 aa31.84■■■□□ 2.69
LRRC42-202ENST00000371368 TOP2AP11388 1531 aaKnown RBP31.81■■■□□ 2.68
LRRC42-202ENST00000371368 CFTRP13569 1480 aa31.64■■■□□ 2.66
LRRC42-202ENST00000371368 MRC2Q9UBG0 1479 aa31.63■■■□□ 2.65
LRRC42-202ENST00000371368 FANCD2Q9BXW9 1451 aa31.57■■■□□ 2.64
LRRC42-202ENST00000371368 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
LRRC42-202ENST00000371368 WDR62O43379 1518 aa31.52■■■□□ 2.64
LRRC42-202ENST00000371368 CCDC88BA6NC98 1476 aa31.49■■■□□ 2.63
LRRC42-202ENST00000371368 URB2Q14146 1524 aaKnown RBP31.29■■■□□ 2.6
LRRC42-202ENST00000371368 PRDM2Q13029 1718 aa31.29■■■□□ 2.6
LRRC42-202ENST00000371368 TOPBP1Q92547 1522 aa31■■■□□ 2.55
LRRC42-202ENST00000371368 ABCC8Q09428 1581 aa30.97■■■□□ 2.55
LRRC42-202ENST00000371368 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
LRRC42-202ENST00000371368 IFT140Q96RY7 1462 aa30.93■■■□□ 2.54
LRRC42-202ENST00000371368 DNMBPQ6XZF7 1577 aa30.91■■■□□ 2.54
LRRC42-202ENST00000371368 ZNF608Q9ULD9 1512 aaPredicted RBP30.85■■■□□ 2.53
LRRC42-202ENST00000371368 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
LRRC42-202ENST00000371368 POLA1P09884 1462 aaPredicted RBP30.71■■■□□ 2.51
LRRC42-202ENST00000371368 TARBP1Q13395 1621 aaKnown RBP30.7■■■□□ 2.51
LRRC42-202ENST00000371368 EIF4G3O43432 1585 aaKnown RBP30.66■■■□□ 2.5
LRRC42-202ENST00000371368 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.49
LRRC42-202ENST00000371368 SOGA1O94964 1423 aa30.62■■■□□ 2.49
LRRC42-202ENST00000371368 RAD54L2Q9Y4B4 1467 aa30.62■■■□□ 2.49
LRRC42-202ENST00000371368 CUX1P39880 1505 aa30.58■■■□□ 2.49
LRRC42-202ENST00000371368 TRIM41Q8WV44 630 aa30.58■■■□□ 2.49
LRRC42-202ENST00000371368 FGD5Q6ZNL6 1462 aa30.57■■■□□ 2.48
LRRC42-202ENST00000371368 TDRD9Q8NDG6 1382 aaKnown RBP30.51■■■□□ 2.47
LRRC42-202ENST00000371368 FBLN2P98095 1184 aa30.4■■■□□ 2.46
LRRC42-202ENST00000371368 WDR97A6NE52 1622 aa30.39■■■□□ 2.46
LRRC42-202ENST00000371368 CHD1O14646 1710 aa30.38■■■□□ 2.45
LRRC42-202ENST00000371368 RIMBP3CA6NJZ7 1639 aa30.31■■■□□ 2.44
LRRC42-202ENST00000371368 RIMBP3BA6NNM3 1639 aa30.31■■■□□ 2.44
LRRC42-202ENST00000371368 RIMBP3Q9UFD9 1639 aa30.31■■■□□ 2.44
LRRC42-202ENST00000371368 SNAPC4Q5SXM2 1469 aa30.3■■■□□ 2.44
LRRC42-202ENST00000371368 GRIN2BQ13224 1484 aa30.29■■■□□ 2.44
LRRC42-202ENST00000371368 ARHGEF11O15085 1522 aa30.25■■■□□ 2.43
LRRC42-202ENST00000371368 MAGI1Q96QZ7 1491 aaPredicted RBP30.24■■■□□ 2.43
LRRC42-202ENST00000371368 ABCA10Q8WWZ4 1543 aa30.23■■■□□ 2.43
LRRC42-202ENST00000371368 CHMP7Q8WUX9 453 aaPredicted RBP30.23■■■□□ 2.43
LRRC42-202ENST00000371368 GAPVD1Q14C86 1478 aa30.23■■■□□ 2.43
LRRC42-202ENST00000371368 WRNQ14191 1432 aaPredicted RBP eCLIP30.22■■■□□ 2.43
LRRC42-202ENST00000371368 TOP2BQ02880 1626 aa30.18■■■□□ 2.42
LRRC42-202ENST00000371368 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
LRRC42-202ENST00000371368 SYNJ1O43426 1573 aa30.15■■■□□ 2.42
LRRC42-202ENST00000371368 PBRM1Q86U86 1689 aa30.14■■■□□ 2.42
LRRC42-202ENST00000371368 SYNJ2O15056 1496 aa30.14■■■□□ 2.42
LRRC42-202ENST00000371368 ABCA5Q8WWZ7 1642 aa30.14■■■□□ 2.41
LRRC42-202ENST00000371368 CYB5RLQ6IPT4 315 aa30.08■■■□□ 2.41
LRRC42-202ENST00000371368 CLASP1Q7Z460 1538 aa30.05■■■□□ 2.4
LRRC42-202ENST00000371368 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
LRRC42-202ENST00000371368 GRIN2AQ12879 1464 aa29.88■■■□□ 2.37
LRRC42-202ENST00000371368 ADAMTS12P58397 1594 aa29.87■■■□□ 2.37
LRRC42-202ENST00000371368 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
LRRC42-202ENST00000371368 FHAD1B1AJZ9 1412 aa29.86■■■□□ 2.37
LRRC42-202ENST00000371368 NUP160Q12769 1436 aa29.77■■■□□ 2.36
LRRC42-202ENST00000371368 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
LRRC42-202ENST00000371368 TRHP20396 242 aaPredicted RBP29.64■■■□□ 2.34
LRRC42-202ENST00000371368 KIF27Q86VH2 1401 aa29.62■■■□□ 2.33
LRRC42-202ENST00000371368 ERCC6L2Q5T890 1561 aa29.62■■■□□ 2.33
LRRC42-202ENST00000371368 IGF1RP08069 1367 aa29.61■■■□□ 2.33
LRRC42-202ENST00000371368 SHROOM2Q13796 1616 aa29.59■■■□□ 2.33
LRRC42-202ENST00000371368 JPH4Q96JJ6 628 aa29.53■■■□□ 2.32
LRRC42-202ENST00000371368 PRG4Q92954 1404 aaPredicted RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms