RNA–Protein interactions for RNA: ENST00000370682.7

PRKACB-202, Transcript of protein kinase cAMP-activated catalytic subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PRKACB, Length 4,288 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKACB-202ENST00000370682 NISCHQ9Y2I1 1504 aa10.23□□□□□ -0.77
PRKACB-202ENST00000370682 CCDC180Q9P1Z9 1646 aa9.23□□□□□ -0.93
PRKACB-202ENST00000370682 ABCC9O60706 1549 aa9.22□□□□□ -0.93
PRKACB-202ENST00000370682 RB1CC1Q8TDY2 1594 aa8.87□□□□□ -0.99
PRKACB-202ENST00000370682 NACADO15069 1562 aa8.81□□□□□ -1
PRKACB-202ENST00000370682 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
PRKACB-202ENST00000370682 MYO15BQ96JP2 1530 aa8.68□□□□□ -1.02
PRKACB-202ENST00000370682 SHROOM4Q9ULL8 1493 aa8.59□□□□□ -1.03
PRKACB-202ENST00000370682 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRKACB-202ENST00000370682 DNAJC5BQ9UF47 199 aa8.55□□□□□ -1.04
PRKACB-202ENST00000370682 DCAF1Q9Y4B6 1507 aa8.53□□□□□ -1.04
PRKACB-202ENST00000370682 ZCCHC6Q5VYS8 1495 aaKnown RBP8.45□□□□□ -1.06
PRKACB-202ENST00000370682 BICRAQ9NZM4 1560 aa8.39□□□□□ -1.07
PRKACB-202ENST00000370682 CECR2Q9BXF3 1484 aa8.38□□□□□ -1.07
PRKACB-202ENST00000370682 UNC13AQ9UPW8 1703 aa8.34□□□□□ -1.07
PRKACB-202ENST00000370682 SCRIBQ14160 1630 aa8.33□□□□□ -1.08
PRKACB-202ENST00000370682 CC2D2AQ9P2K1 1620 aa8.29□□□□□ -1.08
PRKACB-202ENST00000370682 EIF4G1Q04637 1599 aaKnown RBP8.29□□□□□ -1.08
PRKACB-202ENST00000370682 ERCC6Q03468 1493 aa8.12□□□□□ -1.11
PRKACB-202ENST00000370682 CUX2O14529 1486 aa8.11□□□□□ -1.11
PRKACB-202ENST00000370682 DNAJC5Q9H3Z4 198 aa8.11□□□□□ -1.11
PRKACB-202ENST00000370682 NCAPD3P42695 1498 aa8.1□□□□□ -1.11
PRKACB-202ENST00000370682 SMARCA2P51531 1590 aa8.1□□□□□ -1.11
PRKACB-202ENST00000370682 HMGXB3Q12766 1538 aa8.02□□□□□ -1.12
PRKACB-202ENST00000370682 ATAD2BQ9ULI0 1458 aa8.02□□□□□ -1.13
PRKACB-202ENST00000370682 BAZ1AQ9NRL2 1556 aaPredicted RBP8.02□□□□□ -1.13
PRKACB-202ENST00000370682 BAZ1BQ9UIG0 1483 aaKnown RBP8□□□□□ -1.13
PRKACB-202ENST00000370682 PDS5BQ9NTI5 1447 aa7.99□□□□□ -1.13
PRKACB-202ENST00000370682 SMARCA4P51532 1647 aa7.96□□□□□ -1.14
PRKACB-202ENST00000370682 LAMC3Q9Y6N6 1575 aa7.92□□□□□ -1.14
PRKACB-202ENST00000370682 PEG3Q9GZU2 1588 aa7.9□□□□□ -1.15
PRKACB-202ENST00000370682 CADPSQ9ULU8 1353 aa7.88□□□□□ -1.15
PRKACB-202ENST00000370682 MRC2Q9UBG0 1479 aa7.84□□□□□ -1.15
PRKACB-202ENST00000370682 NESP48681 1621 aa7.82□□□□□ -1.16
PRKACB-202ENST00000370682 CEP164Q9UPV0 1460 aa7.8□□□□□ -1.16
PRKACB-202ENST00000370682 MROH2BQ7Z745 1585 aa7.8□□□□□ -1.16
PRKACB-202ENST00000370682 OSCARQ8IYS5 282 aa7.78□□□□□ -1.16
PRKACB-202ENST00000370682 THOC2Q8NI27 1593 aaKnown RBP7.77□□□□□ -1.17
PRKACB-202ENST00000370682 FANCD2Q9BXW9 1451 aa7.75□□□□□ -1.17
PRKACB-202ENST00000370682 TRIM41Q8WV44 630 aa7.75□□□□□ -1.17
PRKACB-202ENST00000370682 WDR62O43379 1518 aa7.74□□□□□ -1.17
PRKACB-202ENST00000370682 ABCC8Q09428 1581 aa7.74□□□□□ -1.17
PRKACB-202ENST00000370682 CFTRP13569 1480 aa7.72□□□□□ -1.17
PRKACB-202ENST00000370682 TOP2AP11388 1531 aaKnown RBP7.71□□□□□ -1.18
PRKACB-202ENST00000370682 KIF21AQ7Z4S6 1674 aa7.69□□□□□ -1.18
PRKACB-202ENST00000370682 RSF1Q96T23 1441 aaPredicted RBP7.69□□□□□ -1.18
PRKACB-202ENST00000370682 IFT140Q96RY7 1462 aa7.68□□□□□ -1.18
PRKACB-202ENST00000370682 WIZO95785 1651 aa7.66□□□□□ -1.18
PRKACB-202ENST00000370682 URB2Q14146 1524 aaKnown RBP7.59□□□□□ -1.19
PRKACB-202ENST00000370682 CCDC88BA6NC98 1476 aa7.58□□□□□ -1.2
PRKACB-202ENST00000370682 FBLN2P98095 1184 aa7.57□□□□□ -1.2
PRKACB-202ENST00000370682 TOPBP1Q92547 1522 aa7.56□□□□□ -1.2
PRKACB-202ENST00000370682 DNMBPQ6XZF7 1577 aa7.56□□□□□ -1.2
PRKACB-202ENST00000370682 CHMP7Q8WUX9 453 aaPredicted RBP7.55□□□□□ -1.2
PRKACB-202ENST00000370682 PRDM2Q13029 1718 aa7.55□□□□□ -1.2
PRKACB-202ENST00000370682 WDR97A6NE52 1622 aa7.54□□□□□ -1.2
PRKACB-202ENST00000370682 TRHP20396 242 aaPredicted RBP7.54□□□□□ -1.2
PRKACB-202ENST00000370682 SOGA1O94964 1423 aa7.53□□□□□ -1.2
PRKACB-202ENST00000370682 CYB5RLQ6IPT4 315 aa7.51□□□□□ -1.21
PRKACB-202ENST00000370682 GRIN2BQ13224 1484 aa7.49□□□□□ -1.21
PRKACB-202ENST00000370682 MAGI1Q96QZ7 1491 aaPredicted RBP7.49□□□□□ -1.21
PRKACB-202ENST00000370682 ARHGEF11O15085 1522 aa7.49□□□□□ -1.21
PRKACB-202ENST00000370682 SYNJ1O43426 1573 aa7.48□□□□□ -1.21
PRKACB-202ENST00000370682 ZNF608Q9ULD9 1512 aaPredicted RBP7.48□□□□□ -1.21
PRKACB-202ENST00000370682 RIMBP3CA6NJZ7 1639 aa7.46□□□□□ -1.21
PRKACB-202ENST00000370682 RIMBP3BA6NNM3 1639 aa7.46□□□□□ -1.21
PRKACB-202ENST00000370682 RIMBP3Q9UFD9 1639 aa7.46□□□□□ -1.21
PRKACB-202ENST00000370682 AQRO60306 1485 aaKnown RBP eCLIP7.46□□□□□ -1.21
PRKACB-202ENST00000370682 POLA1P09884 1462 aaPredicted RBP7.46□□□□□ -1.21
PRKACB-202ENST00000370682 AEBP2Q6ZN18 517 aaPredicted RBP7.46□□□□□ -1.21
PRKACB-202ENST00000370682 EIF4G3O43432 1585 aaKnown RBP7.46□□□□□ -1.22
PRKACB-202ENST00000370682 TDRD9Q8NDG6 1382 aaKnown RBP7.44□□□□□ -1.22
PRKACB-202ENST00000370682 NPM1P06748 294 aaKnown RBP eCLIP7.44□□□□□ -1.22
PRKACB-202ENST00000370682 SYNJ2O15056 1496 aa7.44□□□□□ -1.22
PRKACB-202ENST00000370682 FGD5Q6ZNL6 1462 aa7.43□□□□□ -1.22
PRKACB-202ENST00000370682 WRNQ14191 1432 aaPredicted RBP eCLIP7.43□□□□□ -1.22
PRKACB-202ENST00000370682 SNAPC4Q5SXM2 1469 aa7.42□□□□□ -1.22
PRKACB-202ENST00000370682 FAM9AQ8IZU1 332 aaPredicted RBP7.42□□□□□ -1.22
PRKACB-202ENST00000370682 GAPVD1Q14C86 1478 aa7.41□□□□□ -1.22
PRKACB-202ENST00000370682 TARBP1Q13395 1621 aaKnown RBP7.41□□□□□ -1.22
PRKACB-202ENST00000370682 RAD54L2Q9Y4B4 1467 aa7.4□□□□□ -1.22
PRKACB-202ENST00000370682 SUPT5HO00267 1087 aaKnown RBP7.39□□□□□ -1.23
PRKACB-202ENST00000370682 ARAP1Q96P48 1450 aa7.38□□□□□ -1.23
PRKACB-202ENST00000370682 ABCA10Q8WWZ4 1543 aa7.38□□□□□ -1.23
PRKACB-202ENST00000370682 CHD1O14646 1710 aa7.37□□□□□ -1.23
PRKACB-202ENST00000370682 FHAD1B1AJZ9 1412 aa7.37□□□□□ -1.23
PRKACB-202ENST00000370682 CUX1P39880 1505 aa7.35□□□□□ -1.23
PRKACB-202ENST00000370682 CLASP1Q7Z460 1538 aa7.35□□□□□ -1.23
PRKACB-202ENST00000370682 GRIN2AQ12879 1464 aa7.32□□□□□ -1.24
PRKACB-202ENST00000370682 ERICH3Q5RHP9 1530 aa7.31□□□□□ -1.24
PRKACB-202ENST00000370682 NUP160Q12769 1436 aa7.3□□□□□ -1.24
PRKACB-202ENST00000370682 JPH4Q96JJ6 628 aa7.3□□□□□ -1.24
PRKACB-202ENST00000370682 KIF27Q86VH2 1401 aa7.28□□□□□ -1.24
PRKACB-202ENST00000370682 PBRM1Q86U86 1689 aa7.28□□□□□ -1.24
PRKACB-202ENST00000370682 ABCA5Q8WWZ7 1642 aa7.28□□□□□ -1.24
PRKACB-202ENST00000370682 CARMIL2Q6F5E8 1435 aa7.28□□□□□ -1.24
PRKACB-202ENST00000370682 TOP2BQ02880 1626 aa7.27□□□□□ -1.25
PRKACB-202ENST00000370682 PRG4Q92954 1404 aaPredicted RBP7.27□□□□□ -1.25
PRKACB-202ENST00000370682 ADAMTS12P58397 1594 aa7.26□□□□□ -1.25
PRKACB-202ENST00000370682 BIVM-ERCC5R4GMW8 1640 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms