RNA–Protein interactions for RNA: ENST00000369572.3

SMIM8-203, Transcript of small integral membrane protein 8, humanhuman

TSL 5

Gene SMIM8, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-203ENST00000369572 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
SMIM8-203ENST00000369572 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
SMIM8-203ENST00000369572 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
SMIM8-203ENST00000369572 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
SMIM8-203ENST00000369572 ABCC9O60706 1549 aa19.22■□□□□ 0.67
SMIM8-203ENST00000369572 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
SMIM8-203ENST00000369572 DCAF8L2P0C7V8 631 aa18.48■□□□□ 0.55
SMIM8-203ENST00000369572 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
SMIM8-203ENST00000369572 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
SMIM8-203ENST00000369572 NACADO15069 1562 aa18.31■□□□□ 0.52
SMIM8-203ENST00000369572 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
SMIM8-203ENST00000369572 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
SMIM8-203ENST00000369572 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
SMIM8-203ENST00000369572 DCAF1Q9Y4B6 1507 aa17.99■□□□□ 0.47
SMIM8-203ENST00000369572 PABPN1Q86U42 306 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMIM8-203ENST00000369572 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
SMIM8-203ENST00000369572 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
SMIM8-203ENST00000369572 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
SMIM8-203ENST00000369572 SHROOM4Q9ULL8 1493 aa17.52■□□□□ 0.4
SMIM8-203ENST00000369572 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
SMIM8-203ENST00000369572 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
SMIM8-203ENST00000369572 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
SMIM8-203ENST00000369572 FOXD1Q16676 465 aa17.22■□□□□ 0.35
SMIM8-203ENST00000369572 SMARCA4P51532 1647 aa17.02■□□□□ 0.31
SMIM8-203ENST00000369572 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
SMIM8-203ENST00000369572 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
SMIM8-203ENST00000369572 ATAD2BQ9ULI0 1458 aa16.9■□□□□ 0.3
SMIM8-203ENST00000369572 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
SMIM8-203ENST00000369572 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
SMIM8-203ENST00000369572 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
SMIM8-203ENST00000369572 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
SMIM8-203ENST00000369572 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
SMIM8-203ENST00000369572 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.27
SMIM8-203ENST00000369572 WIZO95785 1651 aa16.75■□□□□ 0.27
SMIM8-203ENST00000369572 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
SMIM8-203ENST00000369572 NESP48681 1621 aa16.59■□□□□ 0.25
SMIM8-203ENST00000369572 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
SMIM8-203ENST00000369572 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
SMIM8-203ENST00000369572 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
SMIM8-203ENST00000369572 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
SMIM8-203ENST00000369572 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
SMIM8-203ENST00000369572 ADRA2BP18089 450 aa16.45■□□□□ 0.22
SMIM8-203ENST00000369572 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
SMIM8-203ENST00000369572 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
SMIM8-203ENST00000369572 CUX2O14529 1486 aa16.34■□□□□ 0.21
SMIM8-203ENST00000369572 THOC2Q8NI27 1593 aaKnown RBP16.33■□□□□ 0.2
SMIM8-203ENST00000369572 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
SMIM8-203ENST00000369572 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
SMIM8-203ENST00000369572 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
SMIM8-203ENST00000369572 CFTRP13569 1480 aa16.27■□□□□ 0.19
SMIM8-203ENST00000369572 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
SMIM8-203ENST00000369572 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
SMIM8-203ENST00000369572 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
SMIM8-203ENST00000369572 PIAS4Q8N2W9 510 aaPredicted RBP16.17■□□□□ 0.18
SMIM8-203ENST00000369572 WDR62O43379 1518 aa16.16■□□□□ 0.18
SMIM8-203ENST00000369572 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
SMIM8-203ENST00000369572 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
SMIM8-203ENST00000369572 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.14
SMIM8-203ENST00000369572 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
SMIM8-203ENST00000369572 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
SMIM8-203ENST00000369572 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
SMIM8-203ENST00000369572 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
SMIM8-203ENST00000369572 POLA1P09884 1462 aaPredicted RBP15.83■□□□□ 0.12
SMIM8-203ENST00000369572 CUX1P39880 1505 aa15.83■□□□□ 0.12
SMIM8-203ENST00000369572 MSH5O43196 834 aa15.81■□□□□ 0.12
SMIM8-203ENST00000369572 EIF4G3O43432 1585 aaKnown RBP15.81■□□□□ 0.12
SMIM8-203ENST00000369572 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
SMIM8-203ENST00000369572 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
SMIM8-203ENST00000369572 RAD54L2Q9Y4B4 1467 aa15.8■□□□□ 0.12
SMIM8-203ENST00000369572 SOGA1O94964 1423 aa15.77■□□□□ 0.12
SMIM8-203ENST00000369572 AQRO60306 1485 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMIM8-203ENST00000369572 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
SMIM8-203ENST00000369572 CHD1O14646 1710 aa15.71■□□□□ 0.1
SMIM8-203ENST00000369572 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
SMIM8-203ENST00000369572 SYNJ1O43426 1573 aa15.7■□□□□ 0.1
SMIM8-203ENST00000369572 WRNQ14191 1432 aaPredicted RBP eCLIP15.69■□□□□ 0.1
SMIM8-203ENST00000369572 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
SMIM8-203ENST00000369572 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
SMIM8-203ENST00000369572 FBLN2P98095 1184 aa15.68■□□□□ 0.1
SMIM8-203ENST00000369572 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
SMIM8-203ENST00000369572 PBRM1Q86U86 1689 aa15.66■□□□□ 0.1
SMIM8-203ENST00000369572 SNAPC4Q5SXM2 1469 aa15.61■□□□□ 0.09
SMIM8-203ENST00000369572 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
SMIM8-203ENST00000369572 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
SMIM8-203ENST00000369572 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
SMIM8-203ENST00000369572 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
SMIM8-203ENST00000369572 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
SMIM8-203ENST00000369572 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
SMIM8-203ENST00000369572 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
SMIM8-203ENST00000369572 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
SMIM8-203ENST00000369572 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
SMIM8-203ENST00000369572 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
SMIM8-203ENST00000369572 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
SMIM8-203ENST00000369572 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
SMIM8-203ENST00000369572 ARHGEF11O15085 1522 aa15.44■□□□□ 0.06
SMIM8-203ENST00000369572 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
SMIM8-203ENST00000369572 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
SMIM8-203ENST00000369572 CLASP1Q7Z460 1538 aa15.39■□□□□ 0.05
SMIM8-203ENST00000369572 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
SMIM8-203ENST00000369572 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms