RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 NISCHQ9Y2I1 1504 aa14.27□□□□□ -0.12
SYCP1-201ENST00000369518 CCDC180Q9P1Z9 1646 aa13.19□□□□□ -0.3
SYCP1-201ENST00000369518 ABCC9O60706 1549 aa12.62□□□□□ -0.39
SYCP1-201ENST00000369518 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
SYCP1-201ENST00000369518 NACADO15069 1562 aa12.35□□□□□ -0.43
SYCP1-201ENST00000369518 MYO15BQ96JP2 1530 aa12.34□□□□□ -0.43
SYCP1-201ENST00000369518 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
SYCP1-201ENST00000369518 UNC13AQ9UPW8 1703 aa12.12□□□□□ -0.47
SYCP1-201ENST00000369518 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
SYCP1-201ENST00000369518 BICRAQ9NZM4 1560 aa11.95□□□□□ -0.5
SYCP1-201ENST00000369518 ZCCHC6Q5VYS8 1495 aaKnown RBP11.86□□□□□ -0.51
SYCP1-201ENST00000369518 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
SYCP1-201ENST00000369518 CC2D2AQ9P2K1 1620 aa11.64□□□□□ -0.55
SYCP1-201ENST00000369518 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
SYCP1-201ENST00000369518 CECR2Q9BXF3 1484 aa11.53□□□□□ -0.56
SYCP1-201ENST00000369518 SCRIBQ14160 1630 aa11.52□□□□□ -0.56
SYCP1-201ENST00000369518 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
SYCP1-201ENST00000369518 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
SYCP1-201ENST00000369518 CUX2O14529 1486 aa11.33□□□□□ -0.6
SYCP1-201ENST00000369518 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
SYCP1-201ENST00000369518 NCAPD3P42695 1498 aa11.29□□□□□ -0.6
SYCP1-201ENST00000369518 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
SYCP1-201ENST00000369518 SMARCA2P51531 1590 aa11.26□□□□□ -0.61
SYCP1-201ENST00000369518 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
SYCP1-201ENST00000369518 BAZ1AQ9NRL2 1556 aaPredicted RBP11.15□□□□□ -0.62
SYCP1-201ENST00000369518 LAMC3Q9Y6N6 1575 aa11.14□□□□□ -0.63
SYCP1-201ENST00000369518 ATAD2BQ9ULI0 1458 aa11.13□□□□□ -0.63
SYCP1-201ENST00000369518 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
SYCP1-201ENST00000369518 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.64
SYCP1-201ENST00000369518 BAZ1BQ9UIG0 1483 aaKnown RBP10.99□□□□□ -0.65
SYCP1-201ENST00000369518 ERCC6Q03468 1493 aa10.98□□□□□ -0.65
SYCP1-201ENST00000369518 PRDM2Q13029 1718 aa10.97□□□□□ -0.65
SYCP1-201ENST00000369518 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
SYCP1-201ENST00000369518 WDR62O43379 1518 aa10.92□□□□□ -0.66
SYCP1-201ENST00000369518 PDS5BQ9NTI5 1447 aa10.91□□□□□ -0.66
SYCP1-201ENST00000369518 MRC2Q9UBG0 1479 aa10.85□□□□□ -0.67
SYCP1-201ENST00000369518 MROH2BQ7Z745 1585 aa10.85□□□□□ -0.67
SYCP1-201ENST00000369518 NESP48681 1621 aa10.82□□□□□ -0.68
SYCP1-201ENST00000369518 CADPSQ9ULU8 1353 aa10.81□□□□□ -0.68
SYCP1-201ENST00000369518 TOP2AP11388 1531 aaKnown RBP10.78□□□□□ -0.68
SYCP1-201ENST00000369518 CFTRP13569 1480 aa10.75□□□□□ -0.69
SYCP1-201ENST00000369518 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
SYCP1-201ENST00000369518 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
SYCP1-201ENST00000369518 WIZO95785 1651 aa10.74□□□□□ -0.69
SYCP1-201ENST00000369518 WDR97A6NE52 1622 aa10.74□□□□□ -0.69
SYCP1-201ENST00000369518 ABCC8Q09428 1581 aa10.68□□□□□ -0.7
SYCP1-201ENST00000369518 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
SYCP1-201ENST00000369518 IFT140Q96RY7 1462 aa10.61□□□□□ -0.71
SYCP1-201ENST00000369518 RSF1Q96T23 1441 aaPredicted RBP10.59□□□□□ -0.71
SYCP1-201ENST00000369518 URB2Q14146 1524 aaKnown RBP10.59□□□□□ -0.71
SYCP1-201ENST00000369518 DNMBPQ6XZF7 1577 aa10.57□□□□□ -0.72
SYCP1-201ENST00000369518 TARBP1Q13395 1621 aaKnown RBP10.52□□□□□ -0.73
SYCP1-201ENST00000369518 RIMBP3CA6NJZ7 1639 aa10.51□□□□□ -0.73
SYCP1-201ENST00000369518 RIMBP3BA6NNM3 1639 aa10.51□□□□□ -0.73
SYCP1-201ENST00000369518 RIMBP3Q9UFD9 1639 aa10.51□□□□□ -0.73
SYCP1-201ENST00000369518 TOPBP1Q92547 1522 aa10.5□□□□□ -0.73
SYCP1-201ENST00000369518 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
SYCP1-201ENST00000369518 CHD1O14646 1710 aa10.46□□□□□ -0.73
SYCP1-201ENST00000369518 CCDC88BA6NC98 1476 aa10.46□□□□□ -0.74
SYCP1-201ENST00000369518 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
SYCP1-201ENST00000369518 ARHGEF11O15085 1522 aa10.41□□□□□ -0.74
SYCP1-201ENST00000369518 CLASP1Q7Z460 1538 aa10.41□□□□□ -0.74
SYCP1-201ENST00000369518 MAGI1Q96QZ7 1491 aaPredicted RBP10.38□□□□□ -0.75
SYCP1-201ENST00000369518 SYNJ1O43426 1573 aa10.37□□□□□ -0.75
SYCP1-201ENST00000369518 PBRM1Q86U86 1689 aa10.36□□□□□ -0.75
SYCP1-201ENST00000369518 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
SYCP1-201ENST00000369518 ZNF608Q9ULD9 1512 aaPredicted RBP10.34□□□□□ -0.75
SYCP1-201ENST00000369518 ABCA5Q8WWZ7 1642 aa10.32□□□□□ -0.76
SYCP1-201ENST00000369518 BIVM-ERCC5R4GMW8 1640 aa10.3□□□□□ -0.76
SYCP1-201ENST00000369518 GRIN2BQ13224 1484 aa10.29□□□□□ -0.76
SYCP1-201ENST00000369518 SYNJ2O15056 1496 aa10.28□□□□□ -0.76
SYCP1-201ENST00000369518 ARAP1Q96P48 1450 aa10.28□□□□□ -0.76
SYCP1-201ENST00000369518 SHROOM2Q13796 1616 aa10.27□□□□□ -0.76
SYCP1-201ENST00000369518 ABCA10Q8WWZ4 1543 aa10.27□□□□□ -0.77
SYCP1-201ENST00000369518 CUX1P39880 1505 aa10.25□□□□□ -0.77
SYCP1-201ENST00000369518 PRKCSHP14314 528 aaPredicted RBP10.25□□□□□ -0.77
SYCP1-201ENST00000369518 FGD5Q6ZNL6 1462 aa10.24□□□□□ -0.77
SYCP1-201ENST00000369518 SOGA1O94964 1423 aa10.23□□□□□ -0.77
SYCP1-201ENST00000369518 SNAPC4Q5SXM2 1469 aa10.22□□□□□ -0.77
SYCP1-201ENST00000369518 ADAMTS12P58397 1594 aa10.21□□□□□ -0.77
SYCP1-201ENST00000369518 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
SYCP1-201ENST00000369518 TOP2BQ02880 1626 aa10.21□□□□□ -0.78
SYCP1-201ENST00000369518 ERICH3Q5RHP9 1530 aa10.2□□□□□ -0.78
SYCP1-201ENST00000369518 AQRO60306 1485 aaKnown RBP eCLIP10.19□□□□□ -0.78
SYCP1-201ENST00000369518 NUP160Q12769 1436 aa10.17□□□□□ -0.78
SYCP1-201ENST00000369518 GAPVD1Q14C86 1478 aa10.16□□□□□ -0.78
SYCP1-201ENST00000369518 RAD54L2Q9Y4B4 1467 aa10.14□□□□□ -0.79
SYCP1-201ENST00000369518 GRIN2AQ12879 1464 aa10.13□□□□□ -0.79
SYCP1-201ENST00000369518 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
SYCP1-201ENST00000369518 CEP170Q5SW79 1584 aa10.1□□□□□ -0.79
SYCP1-201ENST00000369518 CUL7Q14999 1698 aa10.1□□□□□ -0.79
SYCP1-201ENST00000369518 KIF13AQ9H1H9 1805 aa10.09□□□□□ -0.79
SYCP1-201ENST00000369518 WRNQ14191 1432 aaPredicted RBP eCLIP10.09□□□□□ -0.79
SYCP1-201ENST00000369518 EHMT2Q96KQ7 1210 aa10.09□□□□□ -0.79
SYCP1-201ENST00000369518 MAPKBP1O60336 1514 aa10.07□□□□□ -0.8
SYCP1-201ENST00000369518 RUSC2Q8N2Y8 1516 aa10.07□□□□□ -0.8
SYCP1-201ENST00000369518 TDRD9Q8NDG6 1382 aaKnown RBP10.05□□□□□ -0.8
SYCP1-201ENST00000369518 PLPPR3Q6T4P5 718 aa10.05□□□□□ -0.8
SYCP1-201ENST00000369518 CHMP7Q8WUX9 453 aaPredicted RBP10.02□□□□□ -0.81
SYCP1-201ENST00000369518 CYB5RLQ6IPT4 315 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms