RNA–Protein interactions for RNA: ENST00000369387.4

H3F3AP4-201, Transcript of H3 histone, family 3A, pseudogene 4, humanhuman

BASIC

Gene H3F3AP4, Length 411 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP4-201ENST00000369387 NISCHQ9Y2I1 1504 aa21.77■■□□□ 1.08
H3F3AP4-201ENST00000369387 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
H3F3AP4-201ENST00000369387 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
H3F3AP4-201ENST00000369387 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
H3F3AP4-201ENST00000369387 ABCC9O60706 1549 aa17.96■□□□□ 0.47
H3F3AP4-201ENST00000369387 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
H3F3AP4-201ENST00000369387 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
H3F3AP4-201ENST00000369387 NACADO15069 1562 aa17.71■□□□□ 0.43
H3F3AP4-201ENST00000369387 SHROOM4Q9ULL8 1493 aa17.71■□□□□ 0.43
H3F3AP4-201ENST00000369387 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
H3F3AP4-201ENST00000369387 SCRIBQ14160 1630 aa17.46■□□□□ 0.39
H3F3AP4-201ENST00000369387 UNC13AQ9UPW8 1703 aa17.17■□□□□ 0.34
H3F3AP4-201ENST00000369387 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
H3F3AP4-201ENST00000369387 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
H3F3AP4-201ENST00000369387 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
H3F3AP4-201ENST00000369387 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
H3F3AP4-201ENST00000369387 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
H3F3AP4-201ENST00000369387 BAZ1AQ9NRL2 1556 aaPredicted RBP16.83■□□□□ 0.28
H3F3AP4-201ENST00000369387 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
H3F3AP4-201ENST00000369387 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
H3F3AP4-201ENST00000369387 WIZO95785 1651 aa16.67■□□□□ 0.26
H3F3AP4-201ENST00000369387 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
H3F3AP4-201ENST00000369387 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
H3F3AP4-201ENST00000369387 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
H3F3AP4-201ENST00000369387 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
H3F3AP4-201ENST00000369387 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
H3F3AP4-201ENST00000369387 BAZ1BQ9UIG0 1483 aaKnown RBP16.38■□□□□ 0.21
H3F3AP4-201ENST00000369387 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
H3F3AP4-201ENST00000369387 NCAPD3P42695 1498 aa16.33■□□□□ 0.2
H3F3AP4-201ENST00000369387 HMGXB3Q12766 1538 aa16.32■□□□□ 0.2
H3F3AP4-201ENST00000369387 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
H3F3AP4-201ENST00000369387 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
H3F3AP4-201ENST00000369387 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
H3F3AP4-201ENST00000369387 ABCC8Q09428 1581 aa15.98■□□□□ 0.15
H3F3AP4-201ENST00000369387 CFTRP13569 1480 aa15.96■□□□□ 0.14
H3F3AP4-201ENST00000369387 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
H3F3AP4-201ENST00000369387 WRNQ14191 1432 aaPredicted RBP eCLIP15.9■□□□□ 0.14
H3F3AP4-201ENST00000369387 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
H3F3AP4-201ENST00000369387 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
H3F3AP4-201ENST00000369387 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
H3F3AP4-201ENST00000369387 LAMC3Q9Y6N6 1575 aa15.79■□□□□ 0.12
H3F3AP4-201ENST00000369387 TOP2BQ02880 1626 aa15.77■□□□□ 0.12
H3F3AP4-201ENST00000369387 BIVM-ERCC5R4GMW8 1640 aa15.77■□□□□ 0.12
H3F3AP4-201ENST00000369387 NESP48681 1621 aa15.76■□□□□ 0.11
H3F3AP4-201ENST00000369387 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
H3F3AP4-201ENST00000369387 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
H3F3AP4-201ENST00000369387 CUX1P39880 1505 aa15.72■□□□□ 0.11
H3F3AP4-201ENST00000369387 EEA1Q15075 1411 aa15.69■□□□□ 0.1
H3F3AP4-201ENST00000369387 LOC105371045A0A1W2PR82 267 aa15.67■□□□□ 0.1
H3F3AP4-201ENST00000369387 SOGA1O94964 1423 aa15.67■□□□□ 0.1
H3F3AP4-201ENST00000369387 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
H3F3AP4-201ENST00000369387 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
H3F3AP4-201ENST00000369387 RUSC2Q8N2Y8 1516 aa15.61■□□□□ 0.09
H3F3AP4-201ENST00000369387 DNMBPQ6XZF7 1577 aa15.61■□□□□ 0.09
H3F3AP4-201ENST00000369387 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
H3F3AP4-201ENST00000369387 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
H3F3AP4-201ENST00000369387 TOPBP1Q92547 1522 aa15.57■□□□□ 0.08
H3F3AP4-201ENST00000369387 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
H3F3AP4-201ENST00000369387 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
H3F3AP4-201ENST00000369387 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
H3F3AP4-201ENST00000369387 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
H3F3AP4-201ENST00000369387 POLA1P09884 1462 aaPredicted RBP15.48■□□□□ 0.07
H3F3AP4-201ENST00000369387 KIF21BO75037 1637 aa15.48■□□□□ 0.07
H3F3AP4-201ENST00000369387 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
H3F3AP4-201ENST00000369387 GOLGA3Q08378 1498 aa15.46■□□□□ 0.07
H3F3AP4-201ENST00000369387 CUX2O14529 1486 aa15.46■□□□□ 0.06
H3F3AP4-201ENST00000369387 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
H3F3AP4-201ENST00000369387 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
H3F3AP4-201ENST00000369387 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
H3F3AP4-201ENST00000369387 TNIKQ9UKE5 1360 aa15.4■□□□□ 0.06
H3F3AP4-201ENST00000369387 PRXQ9BXM0 1461 aa15.39■□□□□ 0.05
H3F3AP4-201ENST00000369387 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
H3F3AP4-201ENST00000369387 WDR62O43379 1518 aa15.38■□□□□ 0.05
H3F3AP4-201ENST00000369387 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
H3F3AP4-201ENST00000369387 UBTFP17480 764 aaKnown RBP15.37■□□□□ 0.05
H3F3AP4-201ENST00000369387 RAPGEF2Q9Y4G8 1499 aa15.36■□□□□ 0.05
H3F3AP4-201ENST00000369387 IGF1RP08069 1367 aa15.34■□□□□ 0.05
H3F3AP4-201ENST00000369387 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.05
H3F3AP4-201ENST00000369387 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.04
H3F3AP4-201ENST00000369387 CEP162Q5TB80 1403 aa15.31■□□□□ 0.04
H3F3AP4-201ENST00000369387 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
H3F3AP4-201ENST00000369387 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
H3F3AP4-201ENST00000369387 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
H3F3AP4-201ENST00000369387 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.04
H3F3AP4-201ENST00000369387 CUL7Q14999 1698 aa15.27■□□□□ 0.03
H3F3AP4-201ENST00000369387 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.03
H3F3AP4-201ENST00000369387 CLIP1P30622 1438 aa15.2■□□□□ 0.02
H3F3AP4-201ENST00000369387 PBRM1Q86U86 1689 aa15.19■□□□□ 0.02
H3F3AP4-201ENST00000369387 AQRO60306 1485 aaKnown RBP eCLIP15.17■□□□□ 0.02
H3F3AP4-201ENST00000369387 GRIN2BQ13224 1484 aa15.16■□□□□ 0.02
H3F3AP4-201ENST00000369387 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
H3F3AP4-201ENST00000369387 EIF4G3O43432 1585 aaKnown RBP15.13■□□□□ 0.01
H3F3AP4-201ENST00000369387 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
H3F3AP4-201ENST00000369387 FHAD1B1AJZ9 1412 aa15.11■□□□□ 0.01
H3F3AP4-201ENST00000369387 RANGAP1P46060 587 aaPredicted RBP15.09■□□□□ 0.01
H3F3AP4-201ENST00000369387 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
H3F3AP4-201ENST00000369387 VPS8Q8N3P4 1428 aa15.07■□□□□ 0
H3F3AP4-201ENST00000369387 SNAPC4Q5SXM2 1469 aa15.05■□□□□ -0
H3F3AP4-201ENST00000369387 ARAP1Q96P48 1450 aa15.05■□□□□ -0
H3F3AP4-201ENST00000369387 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms