RNA–Protein interactions for RNA: ENST00000369021.7

SCML4-202, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 5 BASIC

Gene SCML4, Length 2,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-202ENST00000369021 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
SCML4-202ENST00000369021 CCDC180Q9P1Z9 1646 aa23.52■■□□□ 1.36
SCML4-202ENST00000369021 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
SCML4-202ENST00000369021 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
SCML4-202ENST00000369021 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
SCML4-202ENST00000369021 SHROOM4Q9ULL8 1493 aa22.27■■□□□ 1.16
SCML4-202ENST00000369021 ABCC9O60706 1549 aa22.19■■□□□ 1.14
SCML4-202ENST00000369021 MYO15BQ96JP2 1530 aa22.02■■□□□ 1.12
SCML4-202ENST00000369021 NACADO15069 1562 aa21.89■■□□□ 1.09
SCML4-202ENST00000369021 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
SCML4-202ENST00000369021 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
SCML4-202ENST00000369021 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
SCML4-202ENST00000369021 UNC13AQ9UPW8 1703 aa21.22■□□□□ 0.99
SCML4-202ENST00000369021 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
SCML4-202ENST00000369021 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
SCML4-202ENST00000369021 BICRAQ9NZM4 1560 aa21■□□□□ 0.95
SCML4-202ENST00000369021 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
SCML4-202ENST00000369021 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
SCML4-202ENST00000369021 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
SCML4-202ENST00000369021 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
SCML4-202ENST00000369021 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
SCML4-202ENST00000369021 WIZO95785 1651 aa20.77■□□□□ 0.91
SCML4-202ENST00000369021 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
SCML4-202ENST00000369021 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
SCML4-202ENST00000369021 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
SCML4-202ENST00000369021 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
SCML4-202ENST00000369021 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
SCML4-202ENST00000369021 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
SCML4-202ENST00000369021 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.85
SCML4-202ENST00000369021 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
SCML4-202ENST00000369021 NCAPD3P42695 1498 aa20.19■□□□□ 0.82
SCML4-202ENST00000369021 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
SCML4-202ENST00000369021 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
SCML4-202ENST00000369021 CC2D2AQ9P2K1 1620 aa20.06■□□□□ 0.8
SCML4-202ENST00000369021 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
SCML4-202ENST00000369021 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
SCML4-202ENST00000369021 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
SCML4-202ENST00000369021 CFTRP13569 1480 aa19.79■□□□□ 0.76
SCML4-202ENST00000369021 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
SCML4-202ENST00000369021 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
SCML4-202ENST00000369021 PRDM2Q13029 1718 aa19.69■□□□□ 0.74
SCML4-202ENST00000369021 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
SCML4-202ENST00000369021 SOGA1O94964 1423 aa19.63■□□□□ 0.73
SCML4-202ENST00000369021 EEA1Q15075 1411 aa19.62■□□□□ 0.73
SCML4-202ENST00000369021 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
SCML4-202ENST00000369021 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
SCML4-202ENST00000369021 BIVM-ERCC5R4GMW8 1640 aa19.61■□□□□ 0.73
SCML4-202ENST00000369021 CUX1P39880 1505 aa19.57■□□□□ 0.72
SCML4-202ENST00000369021 RUSC2Q8N2Y8 1516 aa19.54■□□□□ 0.72
SCML4-202ENST00000369021 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
SCML4-202ENST00000369021 NESP48681 1621 aa19.51■□□□□ 0.71
SCML4-202ENST00000369021 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
SCML4-202ENST00000369021 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
SCML4-202ENST00000369021 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
SCML4-202ENST00000369021 TRIM26Q12899 539 aaPredicted RBP19.44■□□□□ 0.7
SCML4-202ENST00000369021 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.69
SCML4-202ENST00000369021 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
SCML4-202ENST00000369021 HRCP23327 699 aa19.37■□□□□ 0.69
SCML4-202ENST00000369021 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
SCML4-202ENST00000369021 KIF21BO75037 1637 aa19.35■□□□□ 0.69
SCML4-202ENST00000369021 DNMBPQ6XZF7 1577 aa19.35■□□□□ 0.69
SCML4-202ENST00000369021 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
SCML4-202ENST00000369021 KIF27Q86VH2 1401 aa19.33■□□□□ 0.69
SCML4-202ENST00000369021 TNIKQ9UKE5 1360 aa19.32■□□□□ 0.68
SCML4-202ENST00000369021 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
SCML4-202ENST00000369021 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
SCML4-202ENST00000369021 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
SCML4-202ENST00000369021 CUX2O14529 1486 aa19.26■□□□□ 0.67
SCML4-202ENST00000369021 KIF21AQ7Z4S6 1674 aa19.26■□□□□ 0.67
SCML4-202ENST00000369021 URB2Q14146 1524 aaKnown RBP19.24■□□□□ 0.67
SCML4-202ENST00000369021 RAPGEF2Q9Y4G8 1499 aa19.23■□□□□ 0.67
SCML4-202ENST00000369021 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
SCML4-202ENST00000369021 PRXQ9BXM0 1461 aa19.2■□□□□ 0.66
SCML4-202ENST00000369021 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
SCML4-202ENST00000369021 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
SCML4-202ENST00000369021 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
SCML4-202ENST00000369021 IGF1RP08069 1367 aa19.12■□□□□ 0.65
SCML4-202ENST00000369021 PPARGC1BQ86YN6 1023 aaKnown RBP19.12■□□□□ 0.65
SCML4-202ENST00000369021 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
SCML4-202ENST00000369021 CLIP1P30622 1438 aa19.07■□□□□ 0.64
SCML4-202ENST00000369021 WDR97A6NE52 1622 aa19.06■□□□□ 0.64
SCML4-202ENST00000369021 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
SCML4-202ENST00000369021 ERCC6Q03468 1493 aa19.04■□□□□ 0.64
SCML4-202ENST00000369021 RANGAP1P46060 587 aaPredicted RBP19■□□□□ 0.63
SCML4-202ENST00000369021 WDR62O43379 1518 aa18.99■□□□□ 0.63
SCML4-202ENST00000369021 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
SCML4-202ENST00000369021 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
SCML4-202ENST00000369021 TARBP1Q13395 1621 aaKnown RBP18.98■□□□□ 0.63
SCML4-202ENST00000369021 CUL7Q14999 1698 aa18.97■□□□□ 0.63
SCML4-202ENST00000369021 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
SCML4-202ENST00000369021 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
SCML4-202ENST00000369021 THOC2Q8NI27 1593 aaKnown RBP18.9■□□□□ 0.62
SCML4-202ENST00000369021 IFT140Q96RY7 1462 aa18.89■□□□□ 0.61
SCML4-202ENST00000369021 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
SCML4-202ENST00000369021 ARAP1Q96P48 1450 aa18.86■□□□□ 0.61
SCML4-202ENST00000369021 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
SCML4-202ENST00000369021 PBRM1Q86U86 1689 aa18.84■□□□□ 0.61
SCML4-202ENST00000369021 AQRO60306 1485 aaKnown RBP eCLIP18.83■□□□□ 0.6
SCML4-202ENST00000369021 ARHGAP35Q9NRY4 1499 aa18.81■□□□□ 0.6
SCML4-202ENST00000369021 GRIN2BQ13224 1484 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms