RNA–Protein interactions for RNA: ENST00000368790.3

CRCT1-201, Transcript of cysteine rich C-terminal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRCT1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRCT1-201ENST00000368790 NISCHQ9Y2I1 1504 aa30.09■■■□□ 2.41
CRCT1-201ENST00000368790 ABCC9O60706 1549 aa28.23■■■□□ 2.11
CRCT1-201ENST00000368790 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
CRCT1-201ENST00000368790 CCDC180Q9P1Z9 1646 aa27.3■■□□□ 1.96
CRCT1-201ENST00000368790 RB1CC1Q8TDY2 1594 aa26.43■■□□□ 1.82
CRCT1-201ENST00000368790 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
CRCT1-201ENST00000368790 NACADO15069 1562 aa26.06■■□□□ 1.76
CRCT1-201ENST00000368790 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
CRCT1-201ENST00000368790 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
CRCT1-201ENST00000368790 BICRAQ9NZM4 1560 aa25.74■■□□□ 1.71
CRCT1-201ENST00000368790 DNAJC5Q9H3Z4 198 aa25.68■■□□□ 1.7
CRCT1-201ENST00000368790 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
CRCT1-201ENST00000368790 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
CRCT1-201ENST00000368790 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
CRCT1-201ENST00000368790 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
CRCT1-201ENST00000368790 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
CRCT1-201ENST00000368790 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
CRCT1-201ENST00000368790 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
CRCT1-201ENST00000368790 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
CRCT1-201ENST00000368790 CUX2O14529 1486 aa24.65■■□□□ 1.54
CRCT1-201ENST00000368790 ERCC6Q03468 1493 aa24.39■■□□□ 1.5
CRCT1-201ENST00000368790 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
CRCT1-201ENST00000368790 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
CRCT1-201ENST00000368790 NESP48681 1621 aa24.01■■□□□ 1.43
CRCT1-201ENST00000368790 ATAD2BQ9ULI0 1458 aa23.92■■□□□ 1.42
CRCT1-201ENST00000368790 THOC2Q8NI27 1593 aaKnown RBP23.9■■□□□ 1.42
CRCT1-201ENST00000368790 HMGXB3Q12766 1538 aa23.81■■□□□ 1.4
CRCT1-201ENST00000368790 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
CRCT1-201ENST00000368790 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
CRCT1-201ENST00000368790 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
CRCT1-201ENST00000368790 BAZ1BQ9UIG0 1483 aaKnown RBP23.61■■□□□ 1.37
CRCT1-201ENST00000368790 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.37
CRCT1-201ENST00000368790 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.36
CRCT1-201ENST00000368790 BAZ1AQ9NRL2 1556 aaPredicted RBP23.43■■□□□ 1.34
CRCT1-201ENST00000368790 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
CRCT1-201ENST00000368790 PEG3Q9GZU2 1588 aa23.42■■□□□ 1.34
CRCT1-201ENST00000368790 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
CRCT1-201ENST00000368790 WDR62O43379 1518 aa23.39■■□□□ 1.34
CRCT1-201ENST00000368790 CADPSQ9ULU8 1353 aa23.34■■□□□ 1.33
CRCT1-201ENST00000368790 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
CRCT1-201ENST00000368790 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
CRCT1-201ENST00000368790 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
CRCT1-201ENST00000368790 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
CRCT1-201ENST00000368790 CEP164Q9UPV0 1460 aa23.14■■□□□ 1.29
CRCT1-201ENST00000368790 FANCD2Q9BXW9 1451 aa23.06■■□□□ 1.28
CRCT1-201ENST00000368790 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
CRCT1-201ENST00000368790 TRHP20396 242 aaPredicted RBP22.94■■□□□ 1.26
CRCT1-201ENST00000368790 URB2Q14146 1524 aaKnown RBP22.93■■□□□ 1.26
CRCT1-201ENST00000368790 CYB5RLQ6IPT4 315 aa22.93■■□□□ 1.26
CRCT1-201ENST00000368790 CFTRP13569 1480 aa22.89■■□□□ 1.25
CRCT1-201ENST00000368790 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
CRCT1-201ENST00000368790 WIZO95785 1651 aa22.82■■□□□ 1.24
CRCT1-201ENST00000368790 ZNF608Q9ULD9 1512 aaPredicted RBP22.8■■□□□ 1.24
CRCT1-201ENST00000368790 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
CRCT1-201ENST00000368790 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
CRCT1-201ENST00000368790 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
CRCT1-201ENST00000368790 EIF4G3O43432 1585 aaKnown RBP22.58■■□□□ 1.2
CRCT1-201ENST00000368790 CHD1O14646 1710 aa22.53■■□□□ 1.2
CRCT1-201ENST00000368790 TOPBP1Q92547 1522 aa22.52■■□□□ 1.2
CRCT1-201ENST00000368790 FBLN2P98095 1184 aa22.5■■□□□ 1.19
CRCT1-201ENST00000368790 AQRO60306 1485 aaKnown RBP eCLIP22.49■■□□□ 1.19
CRCT1-201ENST00000368790 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
CRCT1-201ENST00000368790 PRDM2Q13029 1718 aa22.43■■□□□ 1.18
CRCT1-201ENST00000368790 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
CRCT1-201ENST00000368790 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
CRCT1-201ENST00000368790 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
CRCT1-201ENST00000368790 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
CRCT1-201ENST00000368790 CCDC88BA6NC98 1476 aa22.28■■□□□ 1.16
CRCT1-201ENST00000368790 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
CRCT1-201ENST00000368790 TDRD9Q8NDG6 1382 aaKnown RBP22.23■■□□□ 1.15
CRCT1-201ENST00000368790 SNAPC4Q5SXM2 1469 aa22.21■■□□□ 1.15
CRCT1-201ENST00000368790 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
CRCT1-201ENST00000368790 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
CRCT1-201ENST00000368790 SYNJ1O43426 1573 aa22.19■■□□□ 1.14
CRCT1-201ENST00000368790 GAPVD1Q14C86 1478 aa22.16■■□□□ 1.14
CRCT1-201ENST00000368790 SOGA1O94964 1423 aa22.14■■□□□ 1.13
CRCT1-201ENST00000368790 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
CRCT1-201ENST00000368790 ILDR1Q86SU0 546 aaPredicted RBP22.06■■□□□ 1.12
CRCT1-201ENST00000368790 SYNJ2O15056 1496 aa22.06■■□□□ 1.12
CRCT1-201ENST00000368790 WDR97A6NE52 1622 aa22.04■■□□□ 1.12
CRCT1-201ENST00000368790 GRIN2BQ13224 1484 aa22.03■■□□□ 1.12
CRCT1-201ENST00000368790 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
CRCT1-201ENST00000368790 ERCC6L2Q5T890 1561 aa21.93■■□□□ 1.1
CRCT1-201ENST00000368790 KDM4FA0A1W2PPD8 638 aa21.85■■□□□ 1.09
CRCT1-201ENST00000368790 CUX1P39880 1505 aa21.83■■□□□ 1.09
CRCT1-201ENST00000368790 KIF13AQ9H1H9 1805 aa21.83■■□□□ 1.08
CRCT1-201ENST00000368790 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
CRCT1-201ENST00000368790 CEP170Q5SW79 1584 aa21.79■■□□□ 1.08
CRCT1-201ENST00000368790 GRIN2AQ12879 1464 aa21.75■■□□□ 1.07
CRCT1-201ENST00000368790 NUP160Q12769 1436 aa21.72■■□□□ 1.07
CRCT1-201ENST00000368790 FAM69CQ0P6D2 419 aa21.71■■□□□ 1.07
CRCT1-201ENST00000368790 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
CRCT1-201ENST00000368790 ABCC10Q5T3U5 1492 aa21.69■■□□□ 1.06
CRCT1-201ENST00000368790 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
CRCT1-201ENST00000368790 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
CRCT1-201ENST00000368790 ADAMTS12P58397 1594 aa21.6■■□□□ 1.05
CRCT1-201ENST00000368790 KDM6BO15054 1643 aa21.59■■□□□ 1.05
CRCT1-201ENST00000368790 PRG4Q92954 1404 aaPredicted RBP21.58■■□□□ 1.05
CRCT1-201ENST00000368790 DIP2BQ9P265 1576 aa21.57■■□□□ 1.04
CRCT1-201ENST00000368790 MAPKBP1O60336 1514 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms