RNA–Protein interactions for RNA: ENST00000368731.6

TRAF3IP2-204, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 3

Gene TRAF3IP2, Length 1,407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-204ENST00000368731 NISCHQ9Y2I1 1504 aa28.63■■■□□ 2.17
TRAF3IP2-204ENST00000368731 ABCC9O60706 1549 aa26.56■■□□□ 1.84
TRAF3IP2-204ENST00000368731 CCDC180Q9P1Z9 1646 aa25.86■■□□□ 1.73
TRAF3IP2-204ENST00000368731 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
TRAF3IP2-204ENST00000368731 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
TRAF3IP2-204ENST00000368731 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.55
TRAF3IP2-204ENST00000368731 NACADO15069 1562 aa24.66■■□□□ 1.54
TRAF3IP2-204ENST00000368731 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
TRAF3IP2-204ENST00000368731 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
TRAF3IP2-204ENST00000368731 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
TRAF3IP2-204ENST00000368731 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
TRAF3IP2-204ENST00000368731 CECR2Q9BXF3 1484 aa23.99■■□□□ 1.43
TRAF3IP2-204ENST00000368731 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
TRAF3IP2-204ENST00000368731 DNAJC5Q9H3Z4 198 aa23.87■■□□□ 1.41
TRAF3IP2-204ENST00000368731 SHROOM4Q9ULL8 1493 aa23.86■■□□□ 1.41
TRAF3IP2-204ENST00000368731 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
TRAF3IP2-204ENST00000368731 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
TRAF3IP2-204ENST00000368731 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
TRAF3IP2-204ENST00000368731 SCRIBQ14160 1630 aa23.58■■□□□ 1.37
TRAF3IP2-204ENST00000368731 CUX2O14529 1486 aa23.12■■□□□ 1.29
TRAF3IP2-204ENST00000368731 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
TRAF3IP2-204ENST00000368731 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
TRAF3IP2-204ENST00000368731 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
TRAF3IP2-204ENST00000368731 NESP48681 1621 aa22.65■■□□□ 1.22
TRAF3IP2-204ENST00000368731 TRIM41Q8WV44 630 aa22.58■■□□□ 1.21
TRAF3IP2-204ENST00000368731 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
TRAF3IP2-204ENST00000368731 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
TRAF3IP2-204ENST00000368731 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
TRAF3IP2-204ENST00000368731 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
TRAF3IP2-204ENST00000368731 BAZ1BQ9UIG0 1483 aaKnown RBP22.38■■□□□ 1.17
TRAF3IP2-204ENST00000368731 LAMC3Q9Y6N6 1575 aa22.34■■□□□ 1.17
TRAF3IP2-204ENST00000368731 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
TRAF3IP2-204ENST00000368731 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
TRAF3IP2-204ENST00000368731 BAZ1AQ9NRL2 1556 aaPredicted RBP22.24■■□□□ 1.15
TRAF3IP2-204ENST00000368731 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
TRAF3IP2-204ENST00000368731 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
TRAF3IP2-204ENST00000368731 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
TRAF3IP2-204ENST00000368731 MROH2BQ7Z745 1585 aa22.06■■□□□ 1.12
TRAF3IP2-204ENST00000368731 WDR62O43379 1518 aa22.05■■□□□ 1.12
TRAF3IP2-204ENST00000368731 OSCARQ8IYS5 282 aa22.04■■□□□ 1.12
TRAF3IP2-204ENST00000368731 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
TRAF3IP2-204ENST00000368731 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
TRAF3IP2-204ENST00000368731 WIZO95785 1651 aa21.73■■□□□ 1.07
TRAF3IP2-204ENST00000368731 RIMBP3CA6NJZ7 1639 aa21.72■■□□□ 1.07
TRAF3IP2-204ENST00000368731 RIMBP3BA6NNM3 1639 aa21.72■■□□□ 1.07
TRAF3IP2-204ENST00000368731 RIMBP3Q9UFD9 1639 aa21.72■■□□□ 1.07
TRAF3IP2-204ENST00000368731 CFTRP13569 1480 aa21.7■■□□□ 1.06
TRAF3IP2-204ENST00000368731 URB2Q14146 1524 aaKnown RBP21.69■■□□□ 1.06
TRAF3IP2-204ENST00000368731 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
TRAF3IP2-204ENST00000368731 CYB5RLQ6IPT4 315 aa21.58■■□□□ 1.05
TRAF3IP2-204ENST00000368731 TRHP20396 242 aaPredicted RBP21.54■■□□□ 1.04
TRAF3IP2-204ENST00000368731 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
TRAF3IP2-204ENST00000368731 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
TRAF3IP2-204ENST00000368731 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
TRAF3IP2-204ENST00000368731 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
TRAF3IP2-204ENST00000368731 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
TRAF3IP2-204ENST00000368731 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
TRAF3IP2-204ENST00000368731 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
TRAF3IP2-204ENST00000368731 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
TRAF3IP2-204ENST00000368731 FBLN2P98095 1184 aa21.3■■□□□ 1
TRAF3IP2-204ENST00000368731 PRDM2Q13029 1718 aa21.29■■□□□ 1
TRAF3IP2-204ENST00000368731 AQRO60306 1485 aaKnown RBP eCLIP21.28■■□□□ 1
TRAF3IP2-204ENST00000368731 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
TRAF3IP2-204ENST00000368731 CHD1O14646 1710 aa21.25■□□□□ 0.99
TRAF3IP2-204ENST00000368731 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
TRAF3IP2-204ENST00000368731 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
TRAF3IP2-204ENST00000368731 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
TRAF3IP2-204ENST00000368731 POLA1P09884 1462 aaPredicted RBP21.09■□□□□ 0.97
TRAF3IP2-204ENST00000368731 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
TRAF3IP2-204ENST00000368731 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
TRAF3IP2-204ENST00000368731 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
TRAF3IP2-204ENST00000368731 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
TRAF3IP2-204ENST00000368731 SOGA1O94964 1423 aa21.02■□□□□ 0.96
TRAF3IP2-204ENST00000368731 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
TRAF3IP2-204ENST00000368731 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
TRAF3IP2-204ENST00000368731 MAGI1Q96QZ7 1491 aaPredicted RBP20.92■□□□□ 0.94
TRAF3IP2-204ENST00000368731 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
TRAF3IP2-204ENST00000368731 WDR97A6NE52 1622 aa20.88■□□□□ 0.93
TRAF3IP2-204ENST00000368731 SYNJ2O15056 1496 aa20.87■□□□□ 0.93
TRAF3IP2-204ENST00000368731 GRIN2BQ13224 1484 aa20.87■□□□□ 0.93
TRAF3IP2-204ENST00000368731 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
TRAF3IP2-204ENST00000368731 CUX1P39880 1505 aa20.74■□□□□ 0.91
TRAF3IP2-204ENST00000368731 ERCC6L2Q5T890 1561 aa20.69■□□□□ 0.9
TRAF3IP2-204ENST00000368731 PBRM1Q86U86 1689 aa20.66■□□□□ 0.9
TRAF3IP2-204ENST00000368731 GRIN2AQ12879 1464 aa20.6■□□□□ 0.89
TRAF3IP2-204ENST00000368731 ABCA10Q8WWZ4 1543 aa20.59■□□□□ 0.89
TRAF3IP2-204ENST00000368731 CEP170Q5SW79 1584 aa20.58■□□□□ 0.89
TRAF3IP2-204ENST00000368731 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
TRAF3IP2-204ENST00000368731 NUP160Q12769 1436 aa20.56■□□□□ 0.88
TRAF3IP2-204ENST00000368731 KIF13AQ9H1H9 1805 aa20.52■□□□□ 0.88
TRAF3IP2-204ENST00000368731 FAM69CQ0P6D2 419 aa20.5■□□□□ 0.87
TRAF3IP2-204ENST00000368731 ILDR1Q86SU0 546 aaPredicted RBP20.48■□□□□ 0.87
TRAF3IP2-204ENST00000368731 SHROOM2Q13796 1616 aa20.48■□□□□ 0.87
TRAF3IP2-204ENST00000368731 KDM4FA0A1W2PPD8 638 aa20.47■□□□□ 0.87
TRAF3IP2-204ENST00000368731 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
TRAF3IP2-204ENST00000368731 FHAD1B1AJZ9 1412 aa20.45■□□□□ 0.86
TRAF3IP2-204ENST00000368731 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
TRAF3IP2-204ENST00000368731 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
TRAF3IP2-204ENST00000368731 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
TRAF3IP2-204ENST00000368731 NPM1P06748 294 aaKnown RBP eCLIP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms