RNA–Protein interactions for RNA: ENST00000368243.5

C1orf61-204, Transcript of chromosome 1 open reading frame 61, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C1orf61, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf61-204ENST00000368243 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
C1orf61-204ENST00000368243 ABCC9O60706 1549 aa23.88■■□□□ 1.41
C1orf61-204ENST00000368243 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.38
C1orf61-204ENST00000368243 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
C1orf61-204ENST00000368243 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
C1orf61-204ENST00000368243 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
C1orf61-204ENST00000368243 NACADO15069 1562 aa22.39■■□□□ 1.18
C1orf61-204ENST00000368243 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.15
C1orf61-204ENST00000368243 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
C1orf61-204ENST00000368243 BICRAQ9NZM4 1560 aa22■■□□□ 1.11
C1orf61-204ENST00000368243 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
C1orf61-204ENST00000368243 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
C1orf61-204ENST00000368243 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
C1orf61-204ENST00000368243 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
C1orf61-204ENST00000368243 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
C1orf61-204ENST00000368243 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
C1orf61-204ENST00000368243 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.02
C1orf61-204ENST00000368243 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
C1orf61-204ENST00000368243 NCAPD3P42695 1498 aa20.67■□□□□ 0.9
C1orf61-204ENST00000368243 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
C1orf61-204ENST00000368243 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
C1orf61-204ENST00000368243 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
C1orf61-204ENST00000368243 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
C1orf61-204ENST00000368243 NESP48681 1621 aa20.53■□□□□ 0.88
C1orf61-204ENST00000368243 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
C1orf61-204ENST00000368243 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
C1orf61-204ENST00000368243 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
C1orf61-204ENST00000368243 BAZ1BQ9UIG0 1483 aaKnown RBP20.49■□□□□ 0.87
C1orf61-204ENST00000368243 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
C1orf61-204ENST00000368243 CUX2O14529 1486 aa20.44■□□□□ 0.86
C1orf61-204ENST00000368243 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
C1orf61-204ENST00000368243 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
C1orf61-204ENST00000368243 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
C1orf61-204ENST00000368243 WIZO95785 1651 aa20.23■□□□□ 0.83
C1orf61-204ENST00000368243 LAMC3Q9Y6N6 1575 aa20.23■□□□□ 0.83
C1orf61-204ENST00000368243 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
C1orf61-204ENST00000368243 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.8
C1orf61-204ENST00000368243 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
C1orf61-204ENST00000368243 RSF1Q96T23 1441 aaPredicted RBP19.98■□□□□ 0.79
C1orf61-204ENST00000368243 WDR62O43379 1518 aa19.92■□□□□ 0.78
C1orf61-204ENST00000368243 CEP164Q9UPV0 1460 aa19.91■□□□□ 0.78
C1orf61-204ENST00000368243 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
C1orf61-204ENST00000368243 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
C1orf61-204ENST00000368243 CFTRP13569 1480 aa19.84■□□□□ 0.77
C1orf61-204ENST00000368243 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
C1orf61-204ENST00000368243 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
C1orf61-204ENST00000368243 CCDC88BA6NC98 1476 aa19.7■□□□□ 0.74
C1orf61-204ENST00000368243 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
C1orf61-204ENST00000368243 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
C1orf61-204ENST00000368243 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
C1orf61-204ENST00000368243 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
C1orf61-204ENST00000368243 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
C1orf61-204ENST00000368243 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
C1orf61-204ENST00000368243 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
C1orf61-204ENST00000368243 RIMBP3CA6NJZ7 1639 aa19.37■□□□□ 0.69
C1orf61-204ENST00000368243 RIMBP3BA6NNM3 1639 aa19.37■□□□□ 0.69
C1orf61-204ENST00000368243 RIMBP3Q9UFD9 1639 aa19.37■□□□□ 0.69
C1orf61-204ENST00000368243 AQRO60306 1485 aaKnown RBP eCLIP19.36■□□□□ 0.69
C1orf61-204ENST00000368243 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
C1orf61-204ENST00000368243 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
C1orf61-204ENST00000368243 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
C1orf61-204ENST00000368243 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
C1orf61-204ENST00000368243 CHD1O14646 1710 aa19.31■□□□□ 0.68
C1orf61-204ENST00000368243 ARHGEF11O15085 1522 aa19.27■□□□□ 0.68
C1orf61-204ENST00000368243 FBLN2P98095 1184 aa19.27■□□□□ 0.68
C1orf61-204ENST00000368243 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
C1orf61-204ENST00000368243 SOGA1O94964 1423 aa19.22■□□□□ 0.67
C1orf61-204ENST00000368243 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
C1orf61-204ENST00000368243 CUX1P39880 1505 aa19.2■□□□□ 0.66
C1orf61-204ENST00000368243 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
C1orf61-204ENST00000368243 CYB5RLQ6IPT4 315 aa19.17■□□□□ 0.66
C1orf61-204ENST00000368243 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
C1orf61-204ENST00000368243 ARAP1Q96P48 1450 aa19.1■□□□□ 0.65
C1orf61-204ENST00000368243 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
C1orf61-204ENST00000368243 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
C1orf61-204ENST00000368243 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
C1orf61-204ENST00000368243 PBRM1Q86U86 1689 aa19.03■□□□□ 0.64
C1orf61-204ENST00000368243 CLASP1Q7Z460 1538 aa19.02■□□□□ 0.64
C1orf61-204ENST00000368243 MAGI1Q96QZ7 1491 aaPredicted RBP19.01■□□□□ 0.63
C1orf61-204ENST00000368243 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
C1orf61-204ENST00000368243 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
C1orf61-204ENST00000368243 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
C1orf61-204ENST00000368243 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
C1orf61-204ENST00000368243 ABCA5Q8WWZ7 1642 aa18.94■□□□□ 0.62
C1orf61-204ENST00000368243 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
C1orf61-204ENST00000368243 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
C1orf61-204ENST00000368243 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
C1orf61-204ENST00000368243 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
C1orf61-204ENST00000368243 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
C1orf61-204ENST00000368243 ADAMTS12P58397 1594 aa18.82■□□□□ 0.6
C1orf61-204ENST00000368243 GRIN2AQ12879 1464 aa18.81■□□□□ 0.6
C1orf61-204ENST00000368243 CEP170Q5SW79 1584 aa18.79■□□□□ 0.6
C1orf61-204ENST00000368243 FHAD1B1AJZ9 1412 aa18.72■□□□□ 0.59
C1orf61-204ENST00000368243 NUP160Q12769 1436 aa18.72■□□□□ 0.59
C1orf61-204ENST00000368243 ERICH3Q5RHP9 1530 aa18.68■□□□□ 0.58
C1orf61-204ENST00000368243 SHROOM2Q13796 1616 aa18.65■□□□□ 0.58
C1orf61-204ENST00000368243 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
C1orf61-204ENST00000368243 RUSC2Q8N2Y8 1516 aa18.55■□□□□ 0.56
C1orf61-204ENST00000368243 JPH4Q96JJ6 628 aa18.55■□□□□ 0.56
C1orf61-204ENST00000368243 KIF13AQ9H1H9 1805 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms