RNA–Protein interactions for RNA: ENST00000367445.7

TROVE2-204, Transcript of TROVE domain family member 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TROVE2, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-204ENST00000367445 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
TROVE2-204ENST00000367445 CCDC180Q9P1Z9 1646 aa18.24■□□□□ 0.51
TROVE2-204ENST00000367445 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
TROVE2-204ENST00000367445 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
TROVE2-204ENST00000367445 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
TROVE2-204ENST00000367445 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
TROVE2-204ENST00000367445 ABCC9O60706 1549 aa17.05■□□□□ 0.32
TROVE2-204ENST00000367445 NACADO15069 1562 aa16.98■□□□□ 0.31
TROVE2-204ENST00000367445 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
TROVE2-204ENST00000367445 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
TROVE2-204ENST00000367445 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
TROVE2-204ENST00000367445 UNC13AQ9UPW8 1703 aa16.38■□□□□ 0.21
TROVE2-204ENST00000367445 SUPT5HO00267 1087 aaKnown RBP16.35■□□□□ 0.21
TROVE2-204ENST00000367445 BICRAQ9NZM4 1560 aa16.23■□□□□ 0.19
TROVE2-204ENST00000367445 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
TROVE2-204ENST00000367445 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
TROVE2-204ENST00000367445 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
TROVE2-204ENST00000367445 MROH2BQ7Z745 1585 aa16.1■□□□□ 0.17
TROVE2-204ENST00000367445 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
TROVE2-204ENST00000367445 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
TROVE2-204ENST00000367445 WIZO95785 1651 aa15.95■□□□□ 0.14
TROVE2-204ENST00000367445 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
TROVE2-204ENST00000367445 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
TROVE2-204ENST00000367445 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
TROVE2-204ENST00000367445 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
TROVE2-204ENST00000367445 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
TROVE2-204ENST00000367445 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
TROVE2-204ENST00000367445 CCDC88BA6NC98 1476 aa15.66■□□□□ 0.1
TROVE2-204ENST00000367445 BAZ1BQ9UIG0 1483 aaKnown RBP15.66■□□□□ 0.1
TROVE2-204ENST00000367445 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
TROVE2-204ENST00000367445 HMGXB3Q12766 1538 aa15.64■□□□□ 0.09
TROVE2-204ENST00000367445 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
TROVE2-204ENST00000367445 TRIM41Q8WV44 630 aa15.44■□□□□ 0.06
TROVE2-204ENST00000367445 CFTRP13569 1480 aa15.31■□□□□ 0.04
TROVE2-204ENST00000367445 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
TROVE2-204ENST00000367445 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
TROVE2-204ENST00000367445 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
TROVE2-204ENST00000367445 CADPSQ9ULU8 1353 aa15.23■□□□□ 0.03
TROVE2-204ENST00000367445 EEA1Q15075 1411 aa15.16■□□□□ 0.02
TROVE2-204ENST00000367445 SYNJ1O43426 1573 aa15.16■□□□□ 0.02
TROVE2-204ENST00000367445 TOP2BQ02880 1626 aa15.15■□□□□ 0.02
TROVE2-204ENST00000367445 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
TROVE2-204ENST00000367445 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
TROVE2-204ENST00000367445 LOC105371045A0A1W2PR82 267 aa15.09■□□□□ 0.01
TROVE2-204ENST00000367445 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
TROVE2-204ENST00000367445 CUX1P39880 1505 aa15.06■□□□□ 0
TROVE2-204ENST00000367445 FANCD2Q9BXW9 1451 aa15.04■□□□□ -0
TROVE2-204ENST00000367445 SOGA1O94964 1423 aa15.04■□□□□ -0
TROVE2-204ENST00000367445 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
TROVE2-204ENST00000367445 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
TROVE2-204ENST00000367445 NESP48681 1621 aa14.98□□□□□ -0.01
TROVE2-204ENST00000367445 RUSC2Q8N2Y8 1516 aa14.96□□□□□ -0.01
TROVE2-204ENST00000367445 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
TROVE2-204ENST00000367445 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
TROVE2-204ENST00000367445 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
TROVE2-204ENST00000367445 KIF21BO75037 1637 aa14.91□□□□□ -0.02
TROVE2-204ENST00000367445 GOLGA3Q08378 1498 aa14.89□□□□□ -0.03
TROVE2-204ENST00000367445 KIF27Q86VH2 1401 aa14.89□□□□□ -0.03
TROVE2-204ENST00000367445 TOPBP1Q92547 1522 aa14.89□□□□□ -0.03
TROVE2-204ENST00000367445 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
TROVE2-204ENST00000367445 FGD5Q6ZNL6 1462 aa14.88□□□□□ -0.03
TROVE2-204ENST00000367445 TNIKQ9UKE5 1360 aa14.88□□□□□ -0.03
TROVE2-204ENST00000367445 URB2Q14146 1524 aaKnown RBP14.83□□□□□ -0.03
TROVE2-204ENST00000367445 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
TROVE2-204ENST00000367445 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
TROVE2-204ENST00000367445 PRXQ9BXM0 1461 aa14.81□□□□□ -0.04
TROVE2-204ENST00000367445 POLA1P09884 1462 aaPredicted RBP14.81□□□□□ -0.04
TROVE2-204ENST00000367445 ABCA10Q8WWZ4 1543 aa14.8□□□□□ -0.04
TROVE2-204ENST00000367445 CUX2O14529 1486 aa14.79□□□□□ -0.04
TROVE2-204ENST00000367445 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.05
TROVE2-204ENST00000367445 UBTFP17480 764 aaKnown RBP14.76□□□□□ -0.05
TROVE2-204ENST00000367445 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
TROVE2-204ENST00000367445 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
TROVE2-204ENST00000367445 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
TROVE2-204ENST00000367445 IGF1RP08069 1367 aa14.74□□□□□ -0.05
TROVE2-204ENST00000367445 WDR97A6NE52 1622 aa14.72□□□□□ -0.05
TROVE2-204ENST00000367445 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
TROVE2-204ENST00000367445 WDR62O43379 1518 aa14.69□□□□□ -0.06
TROVE2-204ENST00000367445 CARMIL1Q5VZK9 1371 aa14.67□□□□□ -0.06
TROVE2-204ENST00000367445 TARBP1Q13395 1621 aaKnown RBP14.66□□□□□ -0.06
TROVE2-204ENST00000367445 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
TROVE2-204ENST00000367445 CUL7Q14999 1698 aa14.65□□□□□ -0.06
TROVE2-204ENST00000367445 ERCC6Q03468 1493 aa14.65□□□□□ -0.06
TROVE2-204ENST00000367445 CLIP1P30622 1438 aa14.63□□□□□ -0.07
TROVE2-204ENST00000367445 IFT140Q96RY7 1462 aa14.62□□□□□ -0.07
TROVE2-204ENST00000367445 GAPVD1Q14C86 1478 aa14.61□□□□□ -0.07
TROVE2-204ENST00000367445 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
TROVE2-204ENST00000367445 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
TROVE2-204ENST00000367445 TRIM26Q12899 539 aaPredicted RBP14.56□□□□□ -0.08
TROVE2-204ENST00000367445 VPS8Q8N3P4 1428 aa14.53□□□□□ -0.08
TROVE2-204ENST00000367445 GRIN2BQ13224 1484 aa14.51□□□□□ -0.09
TROVE2-204ENST00000367445 PBRM1Q86U86 1689 aa14.51□□□□□ -0.09
TROVE2-204ENST00000367445 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
TROVE2-204ENST00000367445 AQRO60306 1485 aaKnown RBP eCLIP14.47□□□□□ -0.09
TROVE2-204ENST00000367445 PCGF6Q9BYE7 350 aa14.47□□□□□ -0.09
TROVE2-204ENST00000367445 ARAP1Q96P48 1450 aa14.47□□□□□ -0.09
TROVE2-204ENST00000367445 ARHGAP35Q9NRY4 1499 aa14.46□□□□□ -0.09
TROVE2-204ENST00000367445 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.1
TROVE2-204ENST00000367445 ADAMTS12P58397 1594 aa14.45□□□□□ -0.1
TROVE2-204ENST00000367445 ZNF608Q9ULD9 1512 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms