RNA–Protein interactions for RNA: ENST00000367363.3

RAET1E-202, retinoic acid early transcript 1E, humanhuman

TSL 1 (best) BASIC

Gene RAET1E, Length 817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1E-202ENST00000367363 NISCHQ9Y2I1 1504 aa23.76■■□□□ 1.39
RAET1E-202ENST00000367363 ABCC9O60706 1549 aa21.18■□□□□ 0.98
RAET1E-202ENST00000367363 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
RAET1E-202ENST00000367363 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
RAET1E-202ENST00000367363 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
RAET1E-202ENST00000367363 NACADO15069 1562 aa20■□□□□ 0.79
RAET1E-202ENST00000367363 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.77
RAET1E-202ENST00000367363 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
RAET1E-202ENST00000367363 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
RAET1E-202ENST00000367363 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
RAET1E-202ENST00000367363 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
RAET1E-202ENST00000367363 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
RAET1E-202ENST00000367363 BICRAQ9NZM4 1560 aa19.51■□□□□ 0.71
RAET1E-202ENST00000367363 SCRIBQ14160 1630 aa19.42■□□□□ 0.7
RAET1E-202ENST00000367363 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
RAET1E-202ENST00000367363 CC2D2AQ9P2K1 1620 aa19.04■□□□□ 0.64
RAET1E-202ENST00000367363 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
RAET1E-202ENST00000367363 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
RAET1E-202ENST00000367363 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
RAET1E-202ENST00000367363 ATAD2BQ9ULI0 1458 aa18.5■□□□□ 0.55
RAET1E-202ENST00000367363 SMARCA4P51532 1647 aa18.47■□□□□ 0.55
RAET1E-202ENST00000367363 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
RAET1E-202ENST00000367363 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
RAET1E-202ENST00000367363 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
RAET1E-202ENST00000367363 BAZ1BQ9UIG0 1483 aaKnown RBP18.34■□□□□ 0.53
RAET1E-202ENST00000367363 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
RAET1E-202ENST00000367363 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
RAET1E-202ENST00000367363 PEG3Q9GZU2 1588 aa18.23■□□□□ 0.51
RAET1E-202ENST00000367363 NESP48681 1621 aa18.23■□□□□ 0.51
RAET1E-202ENST00000367363 WIZO95785 1651 aa18.11■□□□□ 0.49
RAET1E-202ENST00000367363 CUX2O14529 1486 aa18.08■□□□□ 0.49
RAET1E-202ENST00000367363 RSF1Q96T23 1441 aaPredicted RBP18.04■□□□□ 0.48
RAET1E-202ENST00000367363 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
RAET1E-202ENST00000367363 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
RAET1E-202ENST00000367363 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
RAET1E-202ENST00000367363 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
RAET1E-202ENST00000367363 THOC2Q8NI27 1593 aaKnown RBP17.89■□□□□ 0.45
RAET1E-202ENST00000367363 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
RAET1E-202ENST00000367363 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
RAET1E-202ENST00000367363 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
RAET1E-202ENST00000367363 CFTRP13569 1480 aa17.79■□□□□ 0.44
RAET1E-202ENST00000367363 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
RAET1E-202ENST00000367363 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
RAET1E-202ENST00000367363 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
RAET1E-202ENST00000367363 WDR62O43379 1518 aa17.71■□□□□ 0.43
RAET1E-202ENST00000367363 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
RAET1E-202ENST00000367363 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
RAET1E-202ENST00000367363 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
RAET1E-202ENST00000367363 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
RAET1E-202ENST00000367363 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
RAET1E-202ENST00000367363 IFT140Q96RY7 1462 aa17.42■□□□□ 0.38
RAET1E-202ENST00000367363 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
RAET1E-202ENST00000367363 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
RAET1E-202ENST00000367363 ABCC8Q09428 1581 aa17.38■□□□□ 0.37
RAET1E-202ENST00000367363 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
RAET1E-202ENST00000367363 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
RAET1E-202ENST00000367363 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.36
RAET1E-202ENST00000367363 POLA1P09884 1462 aaPredicted RBP17.29■□□□□ 0.36
RAET1E-202ENST00000367363 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
RAET1E-202ENST00000367363 SOGA1O94964 1423 aa17.26■□□□□ 0.35
RAET1E-202ENST00000367363 FBLN2P98095 1184 aa17.25■□□□□ 0.35
RAET1E-202ENST00000367363 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
RAET1E-202ENST00000367363 EIF4G3O43432 1585 aaKnown RBP17.24■□□□□ 0.35
RAET1E-202ENST00000367363 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
RAET1E-202ENST00000367363 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
RAET1E-202ENST00000367363 CUX1P39880 1505 aa17.21■□□□□ 0.35
RAET1E-202ENST00000367363 CHMP7Q8WUX9 453 aaPredicted RBP17.1■□□□□ 0.33
RAET1E-202ENST00000367363 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
RAET1E-202ENST00000367363 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
RAET1E-202ENST00000367363 CHD1O14646 1710 aa17.06■□□□□ 0.32
RAET1E-202ENST00000367363 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
RAET1E-202ENST00000367363 RIMBP3CA6NJZ7 1639 aa17.05■□□□□ 0.32
RAET1E-202ENST00000367363 RIMBP3BA6NNM3 1639 aa17.05■□□□□ 0.32
RAET1E-202ENST00000367363 RIMBP3Q9UFD9 1639 aa17.05■□□□□ 0.32
RAET1E-202ENST00000367363 ARHGEF11O15085 1522 aa17.04■□□□□ 0.32
RAET1E-202ENST00000367363 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
RAET1E-202ENST00000367363 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
RAET1E-202ENST00000367363 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
RAET1E-202ENST00000367363 MAGI1Q96QZ7 1491 aaPredicted RBP17■□□□□ 0.31
RAET1E-202ENST00000367363 ABCA10Q8WWZ4 1543 aa17■□□□□ 0.31
RAET1E-202ENST00000367363 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
RAET1E-202ENST00000367363 SYNJ2O15056 1496 aa16.96■□□□□ 0.31
RAET1E-202ENST00000367363 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
RAET1E-202ENST00000367363 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
RAET1E-202ENST00000367363 ABCA5Q8WWZ7 1642 aa16.91■□□□□ 0.3
RAET1E-202ENST00000367363 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
RAET1E-202ENST00000367363 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
RAET1E-202ENST00000367363 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
RAET1E-202ENST00000367363 CLASP1Q7Z460 1538 aa16.88■□□□□ 0.29
RAET1E-202ENST00000367363 GRIN2AQ12879 1464 aa16.82■□□□□ 0.28
RAET1E-202ENST00000367363 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
RAET1E-202ENST00000367363 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
RAET1E-202ENST00000367363 ADAMTS12P58397 1594 aa16.8■□□□□ 0.28
RAET1E-202ENST00000367363 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
RAET1E-202ENST00000367363 CEP170Q5SW79 1584 aa16.74■□□□□ 0.27
RAET1E-202ENST00000367363 NUP160Q12769 1436 aa16.74■□□□□ 0.27
RAET1E-202ENST00000367363 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
RAET1E-202ENST00000367363 ERCC6L2Q5T890 1561 aa16.69■□□□□ 0.26
RAET1E-202ENST00000367363 IGF1RP08069 1367 aa16.68■□□□□ 0.26
RAET1E-202ENST00000367363 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms