RNA–Protein interactions for RNA: ENST00000367151.4

LEMD1-202, Transcript of LEM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD1, Length 869 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-202ENST00000367151 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
LEMD1-202ENST00000367151 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
LEMD1-202ENST00000367151 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
LEMD1-202ENST00000367151 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
LEMD1-202ENST00000367151 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
LEMD1-202ENST00000367151 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
LEMD1-202ENST00000367151 FOXD1Q16676 465 aa17.64■□□□□ 0.41
LEMD1-202ENST00000367151 POTEDQ86YR6 584 aa17.55■□□□□ 0.4
LEMD1-202ENST00000367151 ABCC9O60706 1549 aa17.47■□□□□ 0.39
LEMD1-202ENST00000367151 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
LEMD1-202ENST00000367151 NACADO15069 1562 aa16.85■□□□□ 0.29
LEMD1-202ENST00000367151 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
LEMD1-202ENST00000367151 MSH5O43196 834 aa16.76■□□□□ 0.27
LEMD1-202ENST00000367151 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
LEMD1-202ENST00000367151 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
LEMD1-202ENST00000367151 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
LEMD1-202ENST00000367151 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
LEMD1-202ENST00000367151 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
LEMD1-202ENST00000367151 PIAS4Q8N2W9 510 aaPredicted RBP16.34■□□□□ 0.21
LEMD1-202ENST00000367151 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
LEMD1-202ENST00000367151 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
LEMD1-202ENST00000367151 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
LEMD1-202ENST00000367151 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
LEMD1-202ENST00000367151 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
LEMD1-202ENST00000367151 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
LEMD1-202ENST00000367151 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
LEMD1-202ENST00000367151 ADRA2BP18089 450 aa15.88■□□□□ 0.13
LEMD1-202ENST00000367151 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
LEMD1-202ENST00000367151 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
LEMD1-202ENST00000367151 SMARCA4P51532 1647 aa15.53■□□□□ 0.08
LEMD1-202ENST00000367151 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
LEMD1-202ENST00000367151 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
LEMD1-202ENST00000367151 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
LEMD1-202ENST00000367151 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
LEMD1-202ENST00000367151 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
LEMD1-202ENST00000367151 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
LEMD1-202ENST00000367151 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
LEMD1-202ENST00000367151 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
LEMD1-202ENST00000367151 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
LEMD1-202ENST00000367151 WIZO95785 1651 aa15.16■□□□□ 0.02
LEMD1-202ENST00000367151 CUX2O14529 1486 aa15.14■□□□□ 0.01
LEMD1-202ENST00000367151 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
LEMD1-202ENST00000367151 NESP48681 1621 aa15.07■□□□□ 0
LEMD1-202ENST00000367151 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
LEMD1-202ENST00000367151 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
LEMD1-202ENST00000367151 TOP2AP11388 1531 aaKnown RBP15.02■□□□□ -0
LEMD1-202ENST00000367151 KIF21AQ7Z4S6 1674 aa15.02□□□□□ -0.01
LEMD1-202ENST00000367151 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
LEMD1-202ENST00000367151 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
LEMD1-202ENST00000367151 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
LEMD1-202ENST00000367151 CFTRP13569 1480 aa14.9□□□□□ -0.02
LEMD1-202ENST00000367151 WDR62O43379 1518 aa14.87□□□□□ -0.03
LEMD1-202ENST00000367151 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
LEMD1-202ENST00000367151 CEP164Q9UPV0 1460 aa14.85□□□□□ -0.03
LEMD1-202ENST00000367151 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
LEMD1-202ENST00000367151 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
LEMD1-202ENST00000367151 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
LEMD1-202ENST00000367151 MAPK8IP2Q13387 824 aaPredicted RBP14.8□□□□□ -0.04
LEMD1-202ENST00000367151 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
LEMD1-202ENST00000367151 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
LEMD1-202ENST00000367151 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
LEMD1-202ENST00000367151 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
LEMD1-202ENST00000367151 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
LEMD1-202ENST00000367151 TOPBP1Q92547 1522 aa14.58□□□□□ -0.08
LEMD1-202ENST00000367151 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
LEMD1-202ENST00000367151 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
LEMD1-202ENST00000367151 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
LEMD1-202ENST00000367151 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
LEMD1-202ENST00000367151 EIF4G3O43432 1585 aaKnown RBP14.46□□□□□ -0.09
LEMD1-202ENST00000367151 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
LEMD1-202ENST00000367151 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
LEMD1-202ENST00000367151 CUX1P39880 1505 aa14.38□□□□□ -0.11
LEMD1-202ENST00000367151 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
LEMD1-202ENST00000367151 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
LEMD1-202ENST00000367151 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
LEMD1-202ENST00000367151 SOGA1O94964 1423 aa14.33□□□□□ -0.11
LEMD1-202ENST00000367151 CHD1O14646 1710 aa14.32□□□□□ -0.12
LEMD1-202ENST00000367151 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
LEMD1-202ENST00000367151 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
LEMD1-202ENST00000367151 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
LEMD1-202ENST00000367151 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
LEMD1-202ENST00000367151 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
LEMD1-202ENST00000367151 PBRM1Q86U86 1689 aa14.28□□□□□ -0.12
LEMD1-202ENST00000367151 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
LEMD1-202ENST00000367151 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
LEMD1-202ENST00000367151 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
LEMD1-202ENST00000367151 GRIN2BQ13224 1484 aa14.24□□□□□ -0.13
LEMD1-202ENST00000367151 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
LEMD1-202ENST00000367151 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
LEMD1-202ENST00000367151 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
LEMD1-202ENST00000367151 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
LEMD1-202ENST00000367151 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
LEMD1-202ENST00000367151 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
LEMD1-202ENST00000367151 SNAPC4Q5SXM2 1469 aa14.21□□□□□ -0.13
LEMD1-202ENST00000367151 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
LEMD1-202ENST00000367151 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
LEMD1-202ENST00000367151 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
LEMD1-202ENST00000367151 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
LEMD1-202ENST00000367151 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
LEMD1-202ENST00000367151 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms