RNA–Protein interactions for RNA: ENST00000367149.6

LEMD1-201, Transcript of LEM domain containing 1, humanhuman

TSL 3 BASIC

Gene LEMD1, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-201ENST00000367149 NISCHQ9Y2I1 1504 aa20.14■□□□□ 0.81
LEMD1-201ENST00000367149 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
LEMD1-201ENST00000367149 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
LEMD1-201ENST00000367149 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
LEMD1-201ENST00000367149 ABCC9O60706 1549 aa17.52■□□□□ 0.39
LEMD1-201ENST00000367149 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
LEMD1-201ENST00000367149 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
LEMD1-201ENST00000367149 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
LEMD1-201ENST00000367149 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
LEMD1-201ENST00000367149 NACADO15069 1562 aa16.85■□□□□ 0.29
LEMD1-201ENST00000367149 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
LEMD1-201ENST00000367149 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
LEMD1-201ENST00000367149 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
LEMD1-201ENST00000367149 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
LEMD1-201ENST00000367149 SCRIBQ14160 1630 aa16.46■□□□□ 0.23
LEMD1-201ENST00000367149 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
LEMD1-201ENST00000367149 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
LEMD1-201ENST00000367149 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
LEMD1-201ENST00000367149 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
LEMD1-201ENST00000367149 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
LEMD1-201ENST00000367149 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
LEMD1-201ENST00000367149 FOXD1Q16676 465 aa15.83■□□□□ 0.12
LEMD1-201ENST00000367149 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
LEMD1-201ENST00000367149 SMARCA4P51532 1647 aa15.66■□□□□ 0.1
LEMD1-201ENST00000367149 BAZ1AQ9NRL2 1556 aaPredicted RBP15.62■□□□□ 0.09
LEMD1-201ENST00000367149 PLPPR3Q6T4P5 718 aa15.58■□□□□ 0.08
LEMD1-201ENST00000367149 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
LEMD1-201ENST00000367149 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
LEMD1-201ENST00000367149 ATAD2BQ9ULI0 1458 aa15.5■□□□□ 0.07
LEMD1-201ENST00000367149 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
LEMD1-201ENST00000367149 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
LEMD1-201ENST00000367149 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
LEMD1-201ENST00000367149 WIZO95785 1651 aa15.44■□□□□ 0.06
LEMD1-201ENST00000367149 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
LEMD1-201ENST00000367149 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
LEMD1-201ENST00000367149 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
LEMD1-201ENST00000367149 NESP48681 1621 aa15.18■□□□□ 0.02
LEMD1-201ENST00000367149 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
LEMD1-201ENST00000367149 CUX2O14529 1486 aa15.14■□□□□ 0.01
LEMD1-201ENST00000367149 SUPT5HO00267 1087 aaKnown RBP15.13■□□□□ 0.01
LEMD1-201ENST00000367149 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
LEMD1-201ENST00000367149 CCDC88BA6NC98 1476 aa15.04■□□□□ -0
LEMD1-201ENST00000367149 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
LEMD1-201ENST00000367149 KIF21AQ7Z4S6 1674 aa15.02□□□□□ -0.01
LEMD1-201ENST00000367149 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
LEMD1-201ENST00000367149 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
LEMD1-201ENST00000367149 PIAS4Q8N2W9 510 aaPredicted RBP14.95□□□□□ -0.02
LEMD1-201ENST00000367149 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
LEMD1-201ENST00000367149 ADRA2BP18089 450 aa14.94□□□□□ -0.02
LEMD1-201ENST00000367149 CFTRP13569 1480 aa14.94□□□□□ -0.02
LEMD1-201ENST00000367149 PPP6R1Q9UPN7 881 aa14.91□□□□□ -0.02
LEMD1-201ENST00000367149 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
LEMD1-201ENST00000367149 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
LEMD1-201ENST00000367149 MSH5O43196 834 aa14.87□□□□□ -0.03
LEMD1-201ENST00000367149 WDR62O43379 1518 aa14.87□□□□□ -0.03
LEMD1-201ENST00000367149 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
LEMD1-201ENST00000367149 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
LEMD1-201ENST00000367149 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
LEMD1-201ENST00000367149 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
LEMD1-201ENST00000367149 DNMBPQ6XZF7 1577 aa14.67□□□□□ -0.06
LEMD1-201ENST00000367149 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
LEMD1-201ENST00000367149 CUX1P39880 1505 aa14.61□□□□□ -0.07
LEMD1-201ENST00000367149 POLA1P09884 1462 aaPredicted RBP14.56□□□□□ -0.08
LEMD1-201ENST00000367149 FGD5Q6ZNL6 1462 aa14.56□□□□□ -0.08
LEMD1-201ENST00000367149 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
LEMD1-201ENST00000367149 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
LEMD1-201ENST00000367149 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
LEMD1-201ENST00000367149 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.08
LEMD1-201ENST00000367149 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
LEMD1-201ENST00000367149 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
LEMD1-201ENST00000367149 TARBP1Q13395 1621 aaKnown RBP14.49□□□□□ -0.09
LEMD1-201ENST00000367149 BIVM-ERCC5R4GMW8 1640 aa14.49□□□□□ -0.09
LEMD1-201ENST00000367149 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
LEMD1-201ENST00000367149 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
LEMD1-201ENST00000367149 SOGA1O94964 1423 aa14.46□□□□□ -0.09
LEMD1-201ENST00000367149 AQRO60306 1485 aaKnown RBP eCLIP14.42□□□□□ -0.1
LEMD1-201ENST00000367149 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
LEMD1-201ENST00000367149 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
LEMD1-201ENST00000367149 ABCA10Q8WWZ4 1543 aa14.36□□□□□ -0.11
LEMD1-201ENST00000367149 ABCA5Q8WWZ7 1642 aa14.35□□□□□ -0.11
LEMD1-201ENST00000367149 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
LEMD1-201ENST00000367149 SNAPC4Q5SXM2 1469 aa14.34□□□□□ -0.11
LEMD1-201ENST00000367149 CHD1O14646 1710 aa14.32□□□□□ -0.12
LEMD1-201ENST00000367149 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
LEMD1-201ENST00000367149 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
LEMD1-201ENST00000367149 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
LEMD1-201ENST00000367149 FBLN2P98095 1184 aa14.26□□□□□ -0.13
LEMD1-201ENST00000367149 ADAMTS12P58397 1594 aa14.24□□□□□ -0.13
LEMD1-201ENST00000367149 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
LEMD1-201ENST00000367149 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
LEMD1-201ENST00000367149 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
LEMD1-201ENST00000367149 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
LEMD1-201ENST00000367149 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
LEMD1-201ENST00000367149 KIF27Q86VH2 1401 aa14.18□□□□□ -0.14
LEMD1-201ENST00000367149 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
LEMD1-201ENST00000367149 ERICH3Q5RHP9 1530 aa14.18□□□□□ -0.14
LEMD1-201ENST00000367149 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
LEMD1-201ENST00000367149 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
LEMD1-201ENST00000367149 RUSC2Q8N2Y8 1516 aa14.15□□□□□ -0.14
LEMD1-201ENST00000367149 GRIN2AQ12879 1464 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 268.4 ms