RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
PARP1-201ENST00000366790 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
PARP1-201ENST00000366790 ABCC9O60706 1549 aa23.11■■□□□ 1.29
PARP1-201ENST00000366790 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
PARP1-201ENST00000366790 NACADO15069 1562 aa22.03■■□□□ 1.12
PARP1-201ENST00000366790 MYO15BQ96JP2 1530 aa21.82■■□□□ 1.08
PARP1-201ENST00000366790 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
PARP1-201ENST00000366790 UNC13AQ9UPW8 1703 aa21.62■■□□□ 1.05
PARP1-201ENST00000366790 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
PARP1-201ENST00000366790 DNAJC5BQ9UF47 199 aa21.57■■□□□ 1.04
PARP1-201ENST00000366790 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
PARP1-201ENST00000366790 PABPN1Q86U42 306 aaKnown RBP eCLIP21.5■■□□□ 1.03
PARP1-201ENST00000366790 BICRAQ9NZM4 1560 aa21.47■■□□□ 1.03
PARP1-201ENST00000366790 SHROOM4Q9ULL8 1493 aa21.27■■□□□ 1
PARP1-201ENST00000366790 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
PARP1-201ENST00000366790 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
PARP1-201ENST00000366790 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
PARP1-201ENST00000366790 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
PARP1-201ENST00000366790 NCAPD3P42695 1498 aa20.33■□□□□ 0.85
PARP1-201ENST00000366790 SMARCA4P51532 1647 aa20.27■□□□□ 0.83
PARP1-201ENST00000366790 ATAD2BQ9ULI0 1458 aa20.25■□□□□ 0.83
PARP1-201ENST00000366790 SMARCA2P51531 1590 aa20.23■□□□□ 0.83
PARP1-201ENST00000366790 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
PARP1-201ENST00000366790 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
PARP1-201ENST00000366790 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
PARP1-201ENST00000366790 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
PARP1-201ENST00000366790 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.8
PARP1-201ENST00000366790 CUX2O14529 1486 aa19.96■□□□□ 0.79
PARP1-201ENST00000366790 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
PARP1-201ENST00000366790 NESP48681 1621 aa19.89■□□□□ 0.77
PARP1-201ENST00000366790 LAMC3Q9Y6N6 1575 aa19.85■□□□□ 0.77
PARP1-201ENST00000366790 DNAJC5Q9H3Z4 198 aa19.77■□□□□ 0.76
PARP1-201ENST00000366790 WIZO95785 1651 aa19.77■□□□□ 0.76
PARP1-201ENST00000366790 THOC2Q8NI27 1593 aaKnown RBP19.72■□□□□ 0.75
PARP1-201ENST00000366790 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
PARP1-201ENST00000366790 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
PARP1-201ENST00000366790 KIF21AQ7Z4S6 1674 aa19.67■□□□□ 0.74
PARP1-201ENST00000366790 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
PARP1-201ENST00000366790 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
PARP1-201ENST00000366790 MRC2Q9UBG0 1479 aa19.52■□□□□ 0.72
PARP1-201ENST00000366790 CFTRP13569 1480 aa19.5■□□□□ 0.71
PARP1-201ENST00000366790 WDR62O43379 1518 aa19.5■□□□□ 0.71
PARP1-201ENST00000366790 CEP164Q9UPV0 1460 aa19.46■□□□□ 0.71
PARP1-201ENST00000366790 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
PARP1-201ENST00000366790 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
PARP1-201ENST00000366790 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
PARP1-201ENST00000366790 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.68
PARP1-201ENST00000366790 ABCC8Q09428 1581 aa19.11■□□□□ 0.65
PARP1-201ENST00000366790 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
PARP1-201ENST00000366790 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
PARP1-201ENST00000366790 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
PARP1-201ENST00000366790 OSCARQ8IYS5 282 aa19.01■□□□□ 0.63
PARP1-201ENST00000366790 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
PARP1-201ENST00000366790 TARBP1Q13395 1621 aaKnown RBP18.94■□□□□ 0.62
PARP1-201ENST00000366790 EIF4G3O43432 1585 aaKnown RBP18.92■□□□□ 0.62
PARP1-201ENST00000366790 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
PARP1-201ENST00000366790 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
PARP1-201ENST00000366790 AQRO60306 1485 aaKnown RBP eCLIP18.84■□□□□ 0.612e-15■■■■□ 19.3
PARP1-201ENST00000366790 SOGA1O94964 1423 aa18.82■□□□□ 0.6
PARP1-201ENST00000366790 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
PARP1-201ENST00000366790 CUX1P39880 1505 aa18.8■□□□□ 0.6
PARP1-201ENST00000366790 RAD54L2Q9Y4B4 1467 aa18.8■□□□□ 0.6
PARP1-201ENST00000366790 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
PARP1-201ENST00000366790 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
PARP1-201ENST00000366790 CHD1O14646 1710 aa18.76■□□□□ 0.59
PARP1-201ENST00000366790 RIMBP3CA6NJZ7 1639 aa18.75■□□□□ 0.59
PARP1-201ENST00000366790 RIMBP3BA6NNM3 1639 aa18.75■□□□□ 0.59
PARP1-201ENST00000366790 RIMBP3Q9UFD9 1639 aa18.75■□□□□ 0.59
PARP1-201ENST00000366790 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
PARP1-201ENST00000366790 ARHGEF11O15085 1522 aa18.71■□□□□ 0.59
PARP1-201ENST00000366790 MAGI1Q96QZ7 1491 aaPredicted RBP18.67■□□□□ 0.58
PARP1-201ENST00000366790 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
PARP1-201ENST00000366790 SNAPC4Q5SXM2 1469 aa18.66■□□□□ 0.58
PARP1-201ENST00000366790 FBLN2P98095 1184 aa18.63■□□□□ 0.57
PARP1-201ENST00000366790 ABCA10Q8WWZ4 1543 aa18.63■□□□□ 0.57
PARP1-201ENST00000366790 GAPVD1Q14C86 1478 aa18.6■□□□□ 0.57
PARP1-201ENST00000366790 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
PARP1-201ENST00000366790 ABCA5Q8WWZ7 1642 aa18.59■□□□□ 0.57
PARP1-201ENST00000366790 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
PARP1-201ENST00000366790 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
PARP1-201ENST00000366790 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
PARP1-201ENST00000366790 CHMP7Q8WUX9 453 aaPredicted RBP18.57■□□□□ 0.56
PARP1-201ENST00000366790 CLASP1Q7Z460 1538 aa18.57■□□□□ 0.56
PARP1-201ENST00000366790 TOP2BQ02880 1626 aa18.56■□□□□ 0.56
PARP1-201ENST00000366790 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
PARP1-201ENST00000366790 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
PARP1-201ENST00000366790 CYB5RLQ6IPT4 315 aa18.52■□□□□ 0.56
PARP1-201ENST00000366790 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
PARP1-201ENST00000366790 GRIN2AQ12879 1464 aa18.41■□□□□ 0.54
PARP1-201ENST00000366790 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
PARP1-201ENST00000366790 FHAD1B1AJZ9 1412 aa18.38■□□□□ 0.53
PARP1-201ENST00000366790 NUP160Q12769 1436 aa18.37■□□□□ 0.53
PARP1-201ENST00000366790 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
PARP1-201ENST00000366790 SHROOM2Q13796 1616 aa18.28■□□□□ 0.52
PARP1-201ENST00000366790 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
PARP1-201ENST00000366790 ERCC6L2Q5T890 1561 aa18.24■□□□□ 0.51
PARP1-201ENST00000366790 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
PARP1-201ENST00000366790 IGF1RP08069 1367 aa18.17■□□□□ 0.5
PARP1-201ENST00000366790 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
PARP1-201ENST00000366790 CUL7Q14999 1698 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms