RNA–Protein interactions for RNA: ENST00000366736.5

MRPL55-210, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-210ENST00000366736 NISCHQ9Y2I1 1504 aa30.99■■■□□ 2.55
MRPL55-210ENST00000366736 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
MRPL55-210ENST00000366736 ABCC9O60706 1549 aa27.28■■□□□ 1.96
MRPL55-210ENST00000366736 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.79
MRPL55-210ENST00000366736 NACADO15069 1562 aa26.12■■□□□ 1.77
MRPL55-210ENST00000366736 MYO15BQ96JP2 1530 aa25.91■■□□□ 1.74
MRPL55-210ENST00000366736 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
MRPL55-210ENST00000366736 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
MRPL55-210ENST00000366736 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
MRPL55-210ENST00000366736 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
MRPL55-210ENST00000366736 BICRAQ9NZM4 1560 aa25.43■■□□□ 1.66
MRPL55-210ENST00000366736 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
MRPL55-210ENST00000366736 DNAJC5BQ9UF47 199 aa25.29■■□□□ 1.64
MRPL55-210ENST00000366736 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
MRPL55-210ENST00000366736 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
MRPL55-210ENST00000366736 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
MRPL55-210ENST00000366736 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
MRPL55-210ENST00000366736 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.52
MRPL55-210ENST00000366736 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
MRPL55-210ENST00000366736 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
MRPL55-210ENST00000366736 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
MRPL55-210ENST00000366736 ATAD2BQ9ULI0 1458 aa24.03■■□□□ 1.44
MRPL55-210ENST00000366736 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
MRPL55-210ENST00000366736 HMGXB3Q12766 1538 aa23.96■■□□□ 1.43
MRPL55-210ENST00000366736 PEG3Q9GZU2 1588 aa23.93■■□□□ 1.42
MRPL55-210ENST00000366736 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
MRPL55-210ENST00000366736 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
MRPL55-210ENST00000366736 WIZO95785 1651 aa23.61■■□□□ 1.37
MRPL55-210ENST00000366736 ERCC6Q03468 1493 aa23.55■■□□□ 1.36
MRPL55-210ENST00000366736 NESP48681 1621 aa23.55■■□□□ 1.36
MRPL55-210ENST00000366736 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
MRPL55-210ENST00000366736 RSF1Q96T23 1441 aaPredicted RBP23.49■■□□□ 1.35
MRPL55-210ENST00000366736 CUX2O14529 1486 aa23.46■■□□□ 1.35
MRPL55-210ENST00000366736 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
MRPL55-210ENST00000366736 CADPSQ9ULU8 1353 aa23.34■■□□□ 1.33
MRPL55-210ENST00000366736 KIF21AQ7Z4S6 1674 aa23.33■■□□□ 1.33
MRPL55-210ENST00000366736 PDS5BQ9NTI5 1447 aa23.32■■□□□ 1.32
MRPL55-210ENST00000366736 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
MRPL55-210ENST00000366736 CFTRP13569 1480 aa23.17■■□□□ 1.3
MRPL55-210ENST00000366736 MRC2Q9UBG0 1479 aa23.1■■□□□ 1.29
MRPL55-210ENST00000366736 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
MRPL55-210ENST00000366736 FANCD2Q9BXW9 1451 aa23.07■■□□□ 1.28
MRPL55-210ENST00000366736 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
MRPL55-210ENST00000366736 WDR62O43379 1518 aa23.06■■□□□ 1.28
MRPL55-210ENST00000366736 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
MRPL55-210ENST00000366736 DNAJC5Q9H3Z4 198 aa23.03■■□□□ 1.28
MRPL55-210ENST00000366736 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
MRPL55-210ENST00000366736 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
MRPL55-210ENST00000366736 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
MRPL55-210ENST00000366736 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
MRPL55-210ENST00000366736 IFT140Q96RY7 1462 aa22.61■■□□□ 1.21
MRPL55-210ENST00000366736 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.21
MRPL55-210ENST00000366736 ZNF608Q9ULD9 1512 aaPredicted RBP22.51■■□□□ 1.19
MRPL55-210ENST00000366736 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
MRPL55-210ENST00000366736 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
MRPL55-210ENST00000366736 EIF4G3O43432 1585 aaKnown RBP22.44■■□□□ 1.18
MRPL55-210ENST00000366736 CUX1P39880 1505 aa22.41■■□□□ 1.18
MRPL55-210ENST00000366736 OSCARQ8IYS5 282 aa22.38■■□□□ 1.17
MRPL55-210ENST00000366736 FGD5Q6ZNL6 1462 aa22.36■■□□□ 1.17
MRPL55-210ENST00000366736 SOGA1O94964 1423 aa22.34■■□□□ 1.17
MRPL55-210ENST00000366736 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
MRPL55-210ENST00000366736 WDR97A6NE52 1622 aa22.33■■□□□ 1.17
MRPL55-210ENST00000366736 AQRO60306 1485 aaKnown RBP eCLIP22.33■■□□□ 1.168e-7■■■■■ 27.9
MRPL55-210ENST00000366736 CHD1O14646 1710 aa22.26■■□□□ 1.15
MRPL55-210ENST00000366736 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
MRPL55-210ENST00000366736 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
MRPL55-210ENST00000366736 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
MRPL55-210ENST00000366736 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
MRPL55-210ENST00000366736 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.14
MRPL55-210ENST00000366736 GRIN2BQ13224 1484 aa22.14■■□□□ 1.13
MRPL55-210ENST00000366736 PBRM1Q86U86 1689 aa22.14■■□□□ 1.13
MRPL55-210ENST00000366736 SNAPC4Q5SXM2 1469 aa22.13■■□□□ 1.13
MRPL55-210ENST00000366736 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
MRPL55-210ENST00000366736 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
MRPL55-210ENST00000366736 ABCA5Q8WWZ7 1642 aa22.12■■□□□ 1.13
MRPL55-210ENST00000366736 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
MRPL55-210ENST00000366736 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
MRPL55-210ENST00000366736 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
MRPL55-210ENST00000366736 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
MRPL55-210ENST00000366736 FBLN2P98095 1184 aa22.06■■□□□ 1.12
MRPL55-210ENST00000366736 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
MRPL55-210ENST00000366736 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
MRPL55-210ENST00000366736 SYNJ2O15056 1496 aa22.04■■□□□ 1.12
MRPL55-210ENST00000366736 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
MRPL55-210ENST00000366736 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
MRPL55-210ENST00000366736 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
MRPL55-210ENST00000366736 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
MRPL55-210ENST00000366736 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
MRPL55-210ENST00000366736 ARAP1Q96P48 1450 aa21.84■■□□□ 1.09
MRPL55-210ENST00000366736 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
MRPL55-210ENST00000366736 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
MRPL55-210ENST00000366736 NUP160Q12769 1436 aa21.79■■□□□ 1.08
MRPL55-210ENST00000366736 CEP170Q5SW79 1584 aa21.77■■□□□ 1.08
MRPL55-210ENST00000366736 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
MRPL55-210ENST00000366736 SHROOM2Q13796 1616 aa21.7■■□□□ 1.06
MRPL55-210ENST00000366736 CUL7Q14999 1698 aa21.66■■□□□ 1.06
MRPL55-210ENST00000366736 IGF1RP08069 1367 aa21.64■■□□□ 1.06
MRPL55-210ENST00000366736 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
MRPL55-210ENST00000366736 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
MRPL55-210ENST00000366736 JPH4Q96JJ6 628 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms