RNA–Protein interactions for RNA: ENST00000366181.2

LINC01562-201, Transcript of long intergenic non-protein coding RNA 1562, humanhuman

TSL 2 BASIC

Gene LINC01562, Length 2,366 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01562-201ENST00000366181 NISCHQ9Y2I1 1504 aa25.85■■□□□ 1.73
LINC01562-201ENST00000366181 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
LINC01562-201ENST00000366181 ABCC9O60706 1549 aa21.91■■□□□ 1.1
LINC01562-201ENST00000366181 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
LINC01562-201ENST00000366181 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
LINC01562-201ENST00000366181 DCAF1Q9Y4B6 1507 aa21.27■□□□□ 0.99
LINC01562-201ENST00000366181 NACADO15069 1562 aa21.19■□□□□ 0.98
LINC01562-201ENST00000366181 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.97
LINC01562-201ENST00000366181 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
LINC01562-201ENST00000366181 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
LINC01562-201ENST00000366181 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
LINC01562-201ENST00000366181 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
LINC01562-201ENST00000366181 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
LINC01562-201ENST00000366181 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.89
LINC01562-201ENST00000366181 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
LINC01562-201ENST00000366181 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
LINC01562-201ENST00000366181 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
LINC01562-201ENST00000366181 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
LINC01562-201ENST00000366181 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
LINC01562-201ENST00000366181 SUPT5HO00267 1087 aaKnown RBP19.92■□□□□ 0.78
LINC01562-201ENST00000366181 WIZO95785 1651 aa19.91■□□□□ 0.78
LINC01562-201ENST00000366181 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
LINC01562-201ENST00000366181 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
LINC01562-201ENST00000366181 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
LINC01562-201ENST00000366181 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
LINC01562-201ENST00000366181 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
LINC01562-201ENST00000366181 SMARCA2P51531 1590 aa19.65■□□□□ 0.74
LINC01562-201ENST00000366181 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.73
LINC01562-201ENST00000366181 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
LINC01562-201ENST00000366181 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
LINC01562-201ENST00000366181 HMGXB3Q12766 1538 aa19.52■□□□□ 0.72
LINC01562-201ENST00000366181 CCDC88BA6NC98 1476 aa19.37■□□□□ 0.69
LINC01562-201ENST00000366181 NESP48681 1621 aa19.16■□□□□ 0.66
LINC01562-201ENST00000366181 PRDM2Q13029 1718 aa19.08■□□□□ 0.64
LINC01562-201ENST00000366181 CFTRP13569 1480 aa19.04■□□□□ 0.64
LINC01562-201ENST00000366181 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
LINC01562-201ENST00000366181 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
LINC01562-201ENST00000366181 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
LINC01562-201ENST00000366181 ABCC8Q09428 1581 aa18.97■□□□□ 0.63
LINC01562-201ENST00000366181 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
LINC01562-201ENST00000366181 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
LINC01562-201ENST00000366181 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
LINC01562-201ENST00000366181 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
LINC01562-201ENST00000366181 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
LINC01562-201ENST00000366181 ERCC6Q03468 1493 aa18.76■□□□□ 0.59
LINC01562-201ENST00000366181 CUX1P39880 1505 aa18.74■□□□□ 0.59
LINC01562-201ENST00000366181 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
LINC01562-201ENST00000366181 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
LINC01562-201ENST00000366181 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
LINC01562-201ENST00000366181 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
LINC01562-201ENST00000366181 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
LINC01562-201ENST00000366181 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
LINC01562-201ENST00000366181 TOPBP1Q92547 1522 aa18.65■□□□□ 0.58
LINC01562-201ENST00000366181 DNMBPQ6XZF7 1577 aa18.64■□□□□ 0.58
LINC01562-201ENST00000366181 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
LINC01562-201ENST00000366181 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
LINC01562-201ENST00000366181 WDR62O43379 1518 aa18.57■□□□□ 0.56
LINC01562-201ENST00000366181 POLA1P09884 1462 aaPredicted RBP18.53■□□□□ 0.56
LINC01562-201ENST00000366181 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.55
LINC01562-201ENST00000366181 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
LINC01562-201ENST00000366181 CUX2O14529 1486 aa18.46■□□□□ 0.55
LINC01562-201ENST00000366181 SOGA1O94964 1423 aa18.45■□□□□ 0.54
LINC01562-201ENST00000366181 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
LINC01562-201ENST00000366181 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
LINC01562-201ENST00000366181 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
LINC01562-201ENST00000366181 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
LINC01562-201ENST00000366181 ABCA10Q8WWZ4 1543 aa18.34■□□□□ 0.53
LINC01562-201ENST00000366181 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.53
LINC01562-201ENST00000366181 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
LINC01562-201ENST00000366181 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
LINC01562-201ENST00000366181 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
LINC01562-201ENST00000366181 AQRO60306 1485 aaKnown RBP eCLIP18.3■□□□□ 0.52
LINC01562-201ENST00000366181 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
LINC01562-201ENST00000366181 PBRM1Q86U86 1689 aa18.29■□□□□ 0.52
LINC01562-201ENST00000366181 KIF27Q86VH2 1401 aa18.25■□□□□ 0.51
LINC01562-201ENST00000366181 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
LINC01562-201ENST00000366181 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
LINC01562-201ENST00000366181 LOC105371045A0A1W2PR82 267 aa18.16■□□□□ 0.5
LINC01562-201ENST00000366181 IGF1RP08069 1367 aa18.15■□□□□ 0.5
LINC01562-201ENST00000366181 EEA1Q15075 1411 aa18.15■□□□□ 0.5
LINC01562-201ENST00000366181 SNAPC4Q5SXM2 1469 aa18.11■□□□□ 0.49
LINC01562-201ENST00000366181 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
LINC01562-201ENST00000366181 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
LINC01562-201ENST00000366181 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
LINC01562-201ENST00000366181 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
LINC01562-201ENST00000366181 CUL7Q14999 1698 aa18.09■□□□□ 0.49
LINC01562-201ENST00000366181 KIF21BO75037 1637 aa18.07■□□□□ 0.48
LINC01562-201ENST00000366181 PRXQ9BXM0 1461 aa18.06■□□□□ 0.48
LINC01562-201ENST00000366181 CHD1O14646 1710 aa18.05■□□□□ 0.48
LINC01562-201ENST00000366181 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
LINC01562-201ENST00000366181 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
LINC01562-201ENST00000366181 FBLN2P98095 1184 aa17.98■□□□□ 0.47
LINC01562-201ENST00000366181 GOLGA3Q08378 1498 aa17.98■□□□□ 0.47
LINC01562-201ENST00000366181 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
LINC01562-201ENST00000366181 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
LINC01562-201ENST00000366181 UBTFP17480 764 aaKnown RBP17.94■□□□□ 0.46
LINC01562-201ENST00000366181 CTTNBP2Q8WZ74 1663 aa17.94■□□□□ 0.46
LINC01562-201ENST00000366181 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
LINC01562-201ENST00000366181 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
LINC01562-201ENST00000366181 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms