RNA–Protein interactions for RNA: ENST00000366131.6

SCNN1A-204, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 5

Gene SCNN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-204ENST00000366131 NISCHQ9Y2I1 1504 aa18.69■□□□□ 0.58
SCNN1A-204ENST00000366131 ABCC9O60706 1549 aa18.17■□□□□ 0.5
SCNN1A-204ENST00000366131 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
SCNN1A-204ENST00000366131 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
SCNN1A-204ENST00000366131 DNAJC5Q9H3Z4 198 aa16.97■□□□□ 0.31
SCNN1A-204ENST00000366131 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCNN1A-204ENST00000366131 RB1CC1Q8TDY2 1594 aa16.7■□□□□ 0.26
SCNN1A-204ENST00000366131 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
SCNN1A-204ENST00000366131 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
SCNN1A-204ENST00000366131 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
SCNN1A-204ENST00000366131 NACADO15069 1562 aa16.34■□□□□ 0.21
SCNN1A-204ENST00000366131 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
SCNN1A-204ENST00000366131 DCAF8L2P0C7V8 631 aa16.17■□□□□ 0.18
SCNN1A-204ENST00000366131 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
SCNN1A-204ENST00000366131 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
SCNN1A-204ENST00000366131 CUX2O14529 1486 aa15.84■□□□□ 0.13
SCNN1A-204ENST00000366131 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
SCNN1A-204ENST00000366131 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
SCNN1A-204ENST00000366131 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
SCNN1A-204ENST00000366131 ERCC6Q03468 1493 aa15.6■□□□□ 0.09
SCNN1A-204ENST00000366131 NESP48681 1621 aa15.41■□□□□ 0.06
SCNN1A-204ENST00000366131 THOC2Q8NI27 1593 aaKnown RBP15.37■□□□□ 0.05
SCNN1A-204ENST00000366131 ZCCHC6Q5VYS8 1495 aaKnown RBP15.3■□□□□ 0.04
SCNN1A-204ENST00000366131 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
SCNN1A-204ENST00000366131 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
SCNN1A-204ENST00000366131 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
SCNN1A-204ENST00000366131 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
SCNN1A-204ENST00000366131 BAZ1AQ9NRL2 1556 aaPredicted RBP15.1■□□□□ 0.01
SCNN1A-204ENST00000366131 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
SCNN1A-204ENST00000366131 RIMBP3CA6NJZ7 1639 aa15.05■□□□□ -0
SCNN1A-204ENST00000366131 RIMBP3BA6NNM3 1639 aa15.05■□□□□ -0
SCNN1A-204ENST00000366131 RIMBP3Q9UFD9 1639 aa15.05■□□□□ -0
SCNN1A-204ENST00000366131 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
SCNN1A-204ENST00000366131 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
SCNN1A-204ENST00000366131 HMGXB3Q12766 1538 aa14.93□□□□□ -0.02
SCNN1A-204ENST00000366131 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
SCNN1A-204ENST00000366131 WDR62O43379 1518 aa14.87□□□□□ -0.03
SCNN1A-204ENST00000366131 TRHP20396 242 aaPredicted RBP14.86□□□□□ -0.03
SCNN1A-204ENST00000366131 ARHGEF11O15085 1522 aa14.86□□□□□ -0.03
SCNN1A-204ENST00000366131 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
SCNN1A-204ENST00000366131 PDS5BQ9NTI5 1447 aa14.81□□□□□ -0.04
SCNN1A-204ENST00000366131 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
SCNN1A-204ENST00000366131 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
SCNN1A-204ENST00000366131 CHIC1Q5VXU3 224 aa14.78□□□□□ -0.04
SCNN1A-204ENST00000366131 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
SCNN1A-204ENST00000366131 ILDR1Q86SU0 546 aaPredicted RBP14.75□□□□□ -0.05
SCNN1A-204ENST00000366131 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
SCNN1A-204ENST00000366131 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
SCNN1A-204ENST00000366131 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
SCNN1A-204ENST00000366131 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
SCNN1A-204ENST00000366131 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
SCNN1A-204ENST00000366131 URB2Q14146 1524 aaKnown RBP14.56□□□□□ -0.08
SCNN1A-204ENST00000366131 FANCD2Q9BXW9 1451 aa14.51□□□□□ -0.09
SCNN1A-204ENST00000366131 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
SCNN1A-204ENST00000366131 CHD1O14646 1710 aa14.48□□□□□ -0.09
SCNN1A-204ENST00000366131 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-204ENST00000366131 RSF1Q96T23 1441 aaPredicted RBP14.33□□□□□ -0.11
SCNN1A-204ENST00000366131 CFTRP13569 1480 aa14.3□□□□□ -0.12
SCNN1A-204ENST00000366131 WIZO95785 1651 aa14.3□□□□□ -0.12
SCNN1A-204ENST00000366131 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
SCNN1A-204ENST00000366131 AQRO60306 1485 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCNN1A-204ENST00000366131 KDM4FA0A1W2PPD8 638 aa14.26□□□□□ -0.13
SCNN1A-204ENST00000366131 FBLN2P98095 1184 aa14.26□□□□□ -0.13
SCNN1A-204ENST00000366131 CLASP1Q7Z460 1538 aa14.24□□□□□ -0.13
SCNN1A-204ENST00000366131 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
SCNN1A-204ENST00000366131 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
SCNN1A-204ENST00000366131 KIF13AQ9H1H9 1805 aa14.15□□□□□ -0.14
SCNN1A-204ENST00000366131 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
SCNN1A-204ENST00000366131 ERCC6L2Q5T890 1561 aa14.11□□□□□ -0.15
SCNN1A-204ENST00000366131 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
SCNN1A-204ENST00000366131 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
SCNN1A-204ENST00000366131 SYNJ1O43426 1573 aa14.02□□□□□ -0.16
SCNN1A-204ENST00000366131 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.16
SCNN1A-204ENST00000366131 TDRD9Q8NDG6 1382 aaKnown RBP14.01□□□□□ -0.17
SCNN1A-204ENST00000366131 HECW2Q9P2P5 1572 aa14□□□□□ -0.17
SCNN1A-204ENST00000366131 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
SCNN1A-204ENST00000366131 POLA1P09884 1462 aaPredicted RBP13.97□□□□□ -0.17
SCNN1A-204ENST00000366131 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-204ENST00000366131 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
SCNN1A-204ENST00000366131 KDM6BO15054 1643 aa13.89□□□□□ -0.19
SCNN1A-204ENST00000366131 ILDR2Q71H61 639 aa13.88□□□□□ -0.19
SCNN1A-204ENST00000366131 FBXO41Q8TF61 875 aa13.88□□□□□ -0.19
SCNN1A-204ENST00000366131 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
SCNN1A-204ENST00000366131 SYNJ2O15056 1496 aa13.86□□□□□ -0.19
SCNN1A-204ENST00000366131 LMTK3Q96Q04 1460 aa13.86□□□□□ -0.19
SCNN1A-204ENST00000366131 ABCC8Q09428 1581 aa13.85□□□□□ -0.19
SCNN1A-204ENST00000366131 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
SCNN1A-204ENST00000366131 TSPOAP1O95153 1857 aa13.84□□□□□ -0.19
SCNN1A-204ENST00000366131 CEP170Q5SW79 1584 aa13.83□□□□□ -0.19
SCNN1A-204ENST00000366131 CCDC88BA6NC98 1476 aa13.83□□□□□ -0.2
SCNN1A-204ENST00000366131 FAM69CQ0P6D2 419 aa13.83□□□□□ -0.2
SCNN1A-204ENST00000366131 SOGA1O94964 1423 aa13.82□□□□□ -0.2
SCNN1A-204ENST00000366131 DIP2BQ9P265 1576 aa13.82□□□□□ -0.2
SCNN1A-204ENST00000366131 ABCC10Q5T3U5 1492 aa13.8□□□□□ -0.2
SCNN1A-204ENST00000366131 GRIN2BQ13224 1484 aa13.79□□□□□ -0.2
SCNN1A-204ENST00000366131 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
SCNN1A-204ENST00000366131 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
SCNN1A-204ENST00000366131 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
SCNN1A-204ENST00000366131 SOCS7O14512 581 aa13.74□□□□□ -0.21
SCNN1A-204ENST00000366131 SHROOM2Q13796 1616 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms