RNA–Protein interactions for RNA: ENST00000365656.1

RNA5S13-201, Transcript of RNA, 5S ribosomal 13, human

BASIC

Gene RNA5S13, Length 119 nt, Biotype rRNA, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNA5S13-201	ENST00000365656	NISCH	Q9Y2I1	1504 aa		26.09	■■□□□ 1.77
RNA5S13-201	ENST00000365656	CCDC180	Q9P1Z9	1646 aa		23.11	■■□□□ 1.29
RNA5S13-201	ENST00000365656	ABCC9	O60706	1549 aa		22.76	■■□□□ 1.23
RNA5S13-201	ENST00000365656	RB1CC1	Q8TDY2	1594 aa		21.78	■■□□□ 1.08
RNA5S13-201	ENST00000365656	NACAD	O15069	1562 aa		21.78	■■□□□ 1.08
RNA5S13-201	ENST00000365656	DCAF8L2	P0C7V8	631 aa		21.77	■■□□□ 1.08
RNA5S13-201	ENST00000365656	ZCCHC6	Q5VYS8	1495 aa	Known RBP	21.75	■■□□□ 1.07
RNA5S13-201	ENST00000365656	MYO15B	Q96JP2	1530 aa		21.66	■■□□□ 1.06
RNA5S13-201	ENST00000365656	DCAF1	Q9Y4B6	1507 aa		21.55	■■□□□ 1.04
RNA5S13-201	ENST00000365656	PABPN1	Q86U42	306 aa	Known RBP eCLIP	21.29	■■□□□ 1
RNA5S13-201	ENST00000365656	UNC13A	Q9UPW8	1703 aa		21.28	■■□□□ 1
RNA5S13-201	ENST00000365656	BICRA	Q9NZM4	1560 aa		21.23	■□□□□ 0.99
RNA5S13-201	ENST00000365656	SCRIB	Q14160	1630 aa		21.17	■□□□□ 0.98
RNA5S13-201	ENST00000365656	DNAJC5B	Q9UF47	199 aa		21.01	■□□□□ 0.95
RNA5S13-201	ENST00000365656	SHROOM4	Q9ULL8	1493 aa		20.91	■□□□□ 0.94
RNA5S13-201	ENST00000365656	EIF4G1	Q04637	1599 aa	Known RBP	20.63	■□□□□ 0.89
RNA5S13-201	ENST00000365656	CC2D2A	Q9P2K1	1620 aa		20.55	■□□□□ 0.88
RNA5S13-201	ENST00000365656	CECR2	Q9BXF3	1484 aa		20.43	■□□□□ 0.86
RNA5S13-201	ENST00000365656	SMARCA4	P51532	1647 aa		20.23	■□□□□ 0.83
RNA5S13-201	ENST00000365656	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	20.18	■□□□□ 0.82
RNA5S13-201	ENST00000365656	ATAD2B	Q9ULI0	1458 aa		20.18	■□□□□ 0.82
RNA5S13-201	ENST00000365656	NCAPD3	P42695	1498 aa		20.15	■□□□□ 0.82
RNA5S13-201	ENST00000365656	MROH2B	Q7Z745	1585 aa		20.15	■□□□□ 0.82
RNA5S13-201	ENST00000365656	SMARCA2	P51531	1590 aa		20.07	■□□□□ 0.8
RNA5S13-201	ENST00000365656	PEG3	Q9GZU2	1588 aa		20.04	■□□□□ 0.8
RNA5S13-201	ENST00000365656	HMGXB3	Q12766	1538 aa		20.01	■□□□□ 0.79
RNA5S13-201	ENST00000365656	BAZ1B	Q9UIG0	1483 aa	Known RBP	19.96	■□□□□ 0.79
RNA5S13-201	ENST00000365656	RSF1	Q96T23	1441 aa	Predicted RBP	19.91	■□□□□ 0.78
RNA5S13-201	ENST00000365656	WIZ	O95785	1651 aa		19.87	■□□□□ 0.77
RNA5S13-201	ENST00000365656	NES	P48681	1621 aa		19.71	■□□□□ 0.75
RNA5S13-201	ENST00000365656	TOP2A	P11388	1531 aa	Known RBP	19.66	■□□□□ 0.74
RNA5S13-201	ENST00000365656	CADPS	Q9ULU8	1353 aa		19.56	■□□□□ 0.72
RNA5S13-201	ENST00000365656	ERCC6	Q03468	1493 aa		19.55	■□□□□ 0.72
RNA5S13-201	ENST00000365656	LAMC3	Q9Y6N6	1575 aa		19.55	■□□□□ 0.72
RNA5S13-201	ENST00000365656	CCDC88B	A6NC98	1476 aa		19.47	■□□□□ 0.71
RNA5S13-201	ENST00000365656	CFTR	P13569	1480 aa		19.45	■□□□□ 0.7
RNA5S13-201	ENST00000365656	PDS5B	Q9NTI5	1447 aa		19.44	■□□□□ 0.7
RNA5S13-201	ENST00000365656	KIF21A	Q7Z4S6	1674 aa		19.38	■□□□□ 0.69
RNA5S13-201	ENST00000365656	THOC2	Q8NI27	1593 aa	Known RBP	19.37	■□□□□ 0.69
RNA5S13-201	ENST00000365656	CUX2	O14529	1486 aa		19.36	■□□□□ 0.69
RNA5S13-201	ENST00000365656	SUPT5H	O00267	1087 aa	Known RBP	19.34	■□□□□ 0.69
RNA5S13-201	ENST00000365656	FANCD2	Q9BXW9	1451 aa		19.33	■□□□□ 0.68
RNA5S13-201	ENST00000365656	MRC2	Q9UBG0	1479 aa		19.28	■□□□□ 0.68
RNA5S13-201	ENST00000365656	CEP164	Q9UPV0	1460 aa		19.28	■□□□□ 0.68
RNA5S13-201	ENST00000365656	WDR62	O43379	1518 aa		19.22	■□□□□ 0.67
RNA5S13-201	ENST00000365656	URB2	Q14146	1524 aa	Known RBP	19.17	■□□□□ 0.66
RNA5S13-201	ENST00000365656	PRDM2	Q13029	1718 aa		19.14	■□□□□ 0.65
RNA5S13-201	ENST00000365656	TOPBP1	Q92547	1522 aa		19.02	■□□□□ 0.64
RNA5S13-201	ENST00000365656	DNMBP	Q6XZF7	1577 aa		18.96	■□□□□ 0.63
RNA5S13-201	ENST00000365656	ABCC8	Q09428	1581 aa		18.93	■□□□□ 0.62
RNA5S13-201	ENST00000365656	CUX1	P39880	1505 aa		18.9	■□□□□ 0.62
RNA5S13-201	ENST00000365656	IFT140	Q96RY7	1462 aa		18.88	■□□□□ 0.61
RNA5S13-201	ENST00000365656	ZNF608	Q9ULD9	1512 aa	Predicted RBP	18.88	■□□□□ 0.61
RNA5S13-201	ENST00000365656	POLA1	P09884	1462 aa	Predicted RBP	18.87	■□□□□ 0.61
RNA5S13-201	ENST00000365656	DNAJC5	Q9H3Z4	198 aa		18.86	■□□□□ 0.61
RNA5S13-201	ENST00000365656	FGD5	Q6ZNL6	1462 aa		18.81	■□□□□ 0.6
RNA5S13-201	ENST00000365656	RAD54L2	Q9Y4B4	1467 aa		18.81	■□□□□ 0.6
RNA5S13-201	ENST00000365656	TARBP1	Q13395	1621 aa	Known RBP	18.81	■□□□□ 0.6
RNA5S13-201	ENST00000365656	SOGA1	O94964	1423 aa		18.76	■□□□□ 0.59
RNA5S13-201	ENST00000365656	AQR	O60306	1485 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
RNA5S13-201	ENST00000365656	WRN	Q14191	1432 aa	Predicted RBP eCLIP	18.73	■□□□□ 0.59
RNA5S13-201	ENST00000365656	EIF4G3	O43432	1585 aa	Known RBP	18.72	■□□□□ 0.59
RNA5S13-201	ENST00000365656	SYNJ1	O43426	1573 aa		18.71	■□□□□ 0.59
RNA5S13-201	ENST00000365656	TDRD9	Q8NDG6	1382 aa	Known RBP	18.7	■□□□□ 0.58
RNA5S13-201	ENST00000365656	TOP2B	Q02880	1626 aa		18.66	■□□□□ 0.58
RNA5S13-201	ENST00000365656	BIVM-ERCC5	R4GMW8	1640 aa		18.64	■□□□□ 0.57
RNA5S13-201	ENST00000365656	ABCA10	Q8WWZ4	1543 aa		18.62	■□□□□ 0.57
RNA5S13-201	ENST00000365656	WDR97	A6NE52	1622 aa		18.62	■□□□□ 0.57
RNA5S13-201	ENST00000365656	OSCAR	Q8IYS5	282 aa		18.56	■□□□□ 0.56
RNA5S13-201	ENST00000365656	SNAPC4	Q5SXM2	1469 aa		18.55	■□□□□ 0.56
RNA5S13-201	ENST00000365656	GRIN2B	Q13224	1484 aa		18.54	■□□□□ 0.56
RNA5S13-201	ENST00000365656	GAPVD1	Q14C86	1478 aa		18.54	■□□□□ 0.56
RNA5S13-201	ENST00000365656	ABCA5	Q8WWZ7	1642 aa		18.54	■□□□□ 0.56
RNA5S13-201	ENST00000365656	MAGI1	Q96QZ7	1491 aa	Predicted RBP	18.48	■□□□□ 0.55
RNA5S13-201	ENST00000365656	FBLN2	P98095	1184 aa		18.46	■□□□□ 0.55
RNA5S13-201	ENST00000365656	CHD1	O14646	1710 aa		18.45	■□□□□ 0.54
RNA5S13-201	ENST00000365656	PBRM1	Q86U86	1689 aa		18.44	■□□□□ 0.54
RNA5S13-201	ENST00000365656	SYNJ2	O15056	1496 aa		18.43	■□□□□ 0.54
RNA5S13-201	ENST00000365656	CHMP7	Q8WUX9	453 aa	Predicted RBP	18.4	■□□□□ 0.54
RNA5S13-201	ENST00000365656	ADAMTS12	P58397	1594 aa		18.37	■□□□□ 0.53
RNA5S13-201	ENST00000365656	ERICH3	Q5RHP9	1530 aa		18.36	■□□□□ 0.53
RNA5S13-201	ENST00000365656	FHAD1	B1AJZ9	1412 aa		18.33	■□□□□ 0.53
RNA5S13-201	ENST00000365656	CLASP1	Q7Z460	1538 aa		18.33	■□□□□ 0.52
RNA5S13-201	ENST00000365656	GRIN2A	Q12879	1464 aa		18.32	■□□□□ 0.52
RNA5S13-201	ENST00000365656	KIF27	Q86VH2	1401 aa		18.32	■□□□□ 0.52
RNA5S13-201	ENST00000365656	IGF1R	P08069	1367 aa		18.3	■□□□□ 0.52
RNA5S13-201	ENST00000365656	ARHGEF11	O15085	1522 aa		18.29	■□□□□ 0.52
RNA5S13-201	ENST00000365656	RIMBP3C	A6NJZ7	1639 aa		18.27	■□□□□ 0.52
RNA5S13-201	ENST00000365656	RIMBP3B	A6NNM3	1639 aa		18.27	■□□□□ 0.52
RNA5S13-201	ENST00000365656	RIMBP3	Q9UFD9	1639 aa		18.27	■□□□□ 0.52
RNA5S13-201	ENST00000365656	NUP160	Q12769	1436 aa		18.27	■□□□□ 0.52
RNA5S13-201	ENST00000365656	CEP170	Q5SW79	1584 aa		18.24	■□□□□ 0.51
RNA5S13-201	ENST00000365656	RUSC2	Q8N2Y8	1516 aa		18.23	■□□□□ 0.51
RNA5S13-201	ENST00000365656	TRIM41	Q8WV44	630 aa		18.23	■□□□□ 0.51
RNA5S13-201	ENST00000365656	ARAP1	Q96P48	1450 aa		18.18	■□□□□ 0.5
RNA5S13-201	ENST00000365656	CARMIL1	Q5VZK9	1371 aa		18.17	■□□□□ 0.5
RNA5S13-201	ENST00000365656	CUL7	Q14999	1698 aa		18.14	■□□□□ 0.49
RNA5S13-201	ENST00000365656	CYB5RL	Q6IPT4	315 aa		18.12	■□□□□ 0.49
RNA5S13-201	ENST00000365656	ERCC6L2	Q5T890	1561 aa		18.12	■□□□□ 0.49
RNA5S13-201	ENST00000365656	SHROOM2	Q13796	1616 aa		18.09	■□□□□ 0.49

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