RNA–Protein interactions for RNA: ENST00000365612.2

U3.46-201, humanhuman

BASIC

Gene U3, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.46-201ENST00000365612 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
U3.46-201ENST00000365612 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
U3.46-201ENST00000365612 ZCCHC6Q5VYS8 1495 aaKnown RBP20.47■□□□□ 0.87
U3.46-201ENST00000365612 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
U3.46-201ENST00000365612 ABCC9O60706 1549 aa20.22■□□□□ 0.83
U3.46-201ENST00000365612 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
U3.46-201ENST00000365612 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
U3.46-201ENST00000365612 NACADO15069 1562 aa19.97■□□□□ 0.79
U3.46-201ENST00000365612 RB1CC1Q8TDY2 1594 aa19.82■□□□□ 0.76
U3.46-201ENST00000365612 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
U3.46-201ENST00000365612 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
U3.46-201ENST00000365612 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
U3.46-201ENST00000365612 BICRAQ9NZM4 1560 aa19.12■□□□□ 0.65
U3.46-201ENST00000365612 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
U3.46-201ENST00000365612 SUPT5HO00267 1087 aaKnown RBP18.92■□□□□ 0.62
U3.46-201ENST00000365612 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.62
U3.46-201ENST00000365612 CECR2Q9BXF3 1484 aa18.89■□□□□ 0.61
U3.46-201ENST00000365612 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
U3.46-201ENST00000365612 MROH2BQ7Z745 1585 aa18.78■□□□□ 0.6
U3.46-201ENST00000365612 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
U3.46-201ENST00000365612 WIZO95785 1651 aa18.61■□□□□ 0.57
U3.46-201ENST00000365612 PEG3Q9GZU2 1588 aa18.6■□□□□ 0.57
U3.46-201ENST00000365612 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
U3.46-201ENST00000365612 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
U3.46-201ENST00000365612 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
U3.46-201ENST00000365612 ATAD2BQ9ULI0 1458 aa18.5■□□□□ 0.55
U3.46-201ENST00000365612 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
U3.46-201ENST00000365612 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
U3.46-201ENST00000365612 HMGXB3Q12766 1538 aa18.39■□□□□ 0.53
U3.46-201ENST00000365612 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
U3.46-201ENST00000365612 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
U3.46-201ENST00000365612 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
U3.46-201ENST00000365612 CFTRP13569 1480 aa17.95■□□□□ 0.46
U3.46-201ENST00000365612 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
U3.46-201ENST00000365612 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
U3.46-201ENST00000365612 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
U3.46-201ENST00000365612 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
U3.46-201ENST00000365612 LAMC3Q9Y6N6 1575 aa17.82■□□□□ 0.44
U3.46-201ENST00000365612 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
U3.46-201ENST00000365612 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
U3.46-201ENST00000365612 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
U3.46-201ENST00000365612 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
U3.46-201ENST00000365612 NESP48681 1621 aa17.68■□□□□ 0.42
U3.46-201ENST00000365612 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
U3.46-201ENST00000365612 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
U3.46-201ENST00000365612 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
U3.46-201ENST00000365612 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
U3.46-201ENST00000365612 CUX1P39880 1505 aa17.59■□□□□ 0.41
U3.46-201ENST00000365612 EEA1Q15075 1411 aa17.55■□□□□ 0.4
U3.46-201ENST00000365612 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
U3.46-201ENST00000365612 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
U3.46-201ENST00000365612 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
U3.46-201ENST00000365612 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
U3.46-201ENST00000365612 SOGA1O94964 1423 aa17.44■□□□□ 0.38
U3.46-201ENST00000365612 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
U3.46-201ENST00000365612 MRC2Q9UBG0 1479 aa17.44■□□□□ 0.38
U3.46-201ENST00000365612 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
U3.46-201ENST00000365612 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
U3.46-201ENST00000365612 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
U3.46-201ENST00000365612 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
U3.46-201ENST00000365612 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
U3.46-201ENST00000365612 WDR62O43379 1518 aa17.34■□□□□ 0.37
U3.46-201ENST00000365612 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
U3.46-201ENST00000365612 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
U3.46-201ENST00000365612 CUX2O14529 1486 aa17.31■□□□□ 0.36
U3.46-201ENST00000365612 LOC105371045A0A1W2PR82 267 aa17.3■□□□□ 0.36
U3.46-201ENST00000365612 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
U3.46-201ENST00000365612 RAD54L2Q9Y4B4 1467 aa17.26■□□□□ 0.35
U3.46-201ENST00000365612 KIF21BO75037 1637 aa17.26■□□□□ 0.35
U3.46-201ENST00000365612 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
U3.46-201ENST00000365612 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
U3.46-201ENST00000365612 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
U3.46-201ENST00000365612 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
U3.46-201ENST00000365612 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
U3.46-201ENST00000365612 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
U3.46-201ENST00000365612 IGF1RP08069 1367 aa17.18■□□□□ 0.34
U3.46-201ENST00000365612 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
U3.46-201ENST00000365612 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
U3.46-201ENST00000365612 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
U3.46-201ENST00000365612 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
U3.46-201ENST00000365612 CUL7Q14999 1698 aa17.13■□□□□ 0.33
U3.46-201ENST00000365612 TDRD9Q8NDG6 1382 aaKnown RBP17.13■□□□□ 0.33
U3.46-201ENST00000365612 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
U3.46-201ENST00000365612 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
U3.46-201ENST00000365612 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
U3.46-201ENST00000365612 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
U3.46-201ENST00000365612 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
U3.46-201ENST00000365612 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.32
U3.46-201ENST00000365612 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.32
U3.46-201ENST00000365612 CEP162Q5TB80 1403 aa17.01■□□□□ 0.31
U3.46-201ENST00000365612 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
U3.46-201ENST00000365612 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
U3.46-201ENST00000365612 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
U3.46-201ENST00000365612 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
U3.46-201ENST00000365612 CLIP1P30622 1438 aa16.93■□□□□ 0.3
U3.46-201ENST00000365612 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
U3.46-201ENST00000365612 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
U3.46-201ENST00000365612 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
U3.46-201ENST00000365612 GRIN2AQ12879 1464 aa16.82■□□□□ 0.28
U3.46-201ENST00000365612 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms