RNA–Protein interactions for RNA: ENST00000365536.1

RN7SKP187-201, Transcript of RNA, 7SK small nuclear pseudogene 187, humanhuman

BASIC

Gene RN7SKP187, Length 330 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP187-201ENST00000365536 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
RN7SKP187-201ENST00000365536 ABCC9O60706 1549 aa16.01■□□□□ 0.15
RN7SKP187-201ENST00000365536 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
RN7SKP187-201ENST00000365536 CCDC180Q9P1Z9 1646 aa15.42■□□□□ 0.06
RN7SKP187-201ENST00000365536 RB1CC1Q8TDY2 1594 aa15□□□□□ -0.01
RN7SKP187-201ENST00000365536 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
RN7SKP187-201ENST00000365536 DNAJC5Q9H3Z4 198 aa14.8□□□□□ -0.04
RN7SKP187-201ENST00000365536 NACADO15069 1562 aa14.77□□□□□ -0.05
RN7SKP187-201ENST00000365536 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
RN7SKP187-201ENST00000365536 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.08
RN7SKP187-201ENST00000365536 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
RN7SKP187-201ENST00000365536 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
RN7SKP187-201ENST00000365536 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
RN7SKP187-201ENST00000365536 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
RN7SKP187-201ENST00000365536 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
RN7SKP187-201ENST00000365536 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.12
RN7SKP187-201ENST00000365536 CUX2O14529 1486 aa14.12□□□□□ -0.15
RN7SKP187-201ENST00000365536 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
RN7SKP187-201ENST00000365536 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
RN7SKP187-201ENST00000365536 ZCCHC6Q5VYS8 1495 aaKnown RBP13.91□□□□□ -0.18
RN7SKP187-201ENST00000365536 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
RN7SKP187-201ENST00000365536 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
RN7SKP187-201ENST00000365536 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
RN7SKP187-201ENST00000365536 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
RN7SKP187-201ENST00000365536 NESP48681 1621 aa13.57□□□□□ -0.24
RN7SKP187-201ENST00000365536 ATAD2BQ9ULI0 1458 aa13.5□□□□□ -0.25
RN7SKP187-201ENST00000365536 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
RN7SKP187-201ENST00000365536 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
RN7SKP187-201ENST00000365536 LAMC3Q9Y6N6 1575 aa13.42□□□□□ -0.26
RN7SKP187-201ENST00000365536 PDS5BQ9NTI5 1447 aa13.4□□□□□ -0.26
RN7SKP187-201ENST00000365536 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
RN7SKP187-201ENST00000365536 BAZ1BQ9UIG0 1483 aaKnown RBP13.34□□□□□ -0.27
RN7SKP187-201ENST00000365536 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
RN7SKP187-201ENST00000365536 KIF21AQ7Z4S6 1674 aa13.31□□□□□ -0.28
RN7SKP187-201ENST00000365536 MRC2Q9UBG0 1479 aa13.3□□□□□ -0.28
RN7SKP187-201ENST00000365536 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
RN7SKP187-201ENST00000365536 WDR62O43379 1518 aa13.29□□□□□ -0.28
RN7SKP187-201ENST00000365536 PEG3Q9GZU2 1588 aa13.22□□□□□ -0.29
RN7SKP187-201ENST00000365536 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.29
RN7SKP187-201ENST00000365536 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
RN7SKP187-201ENST00000365536 RIMBP3CA6NJZ7 1639 aa13.18□□□□□ -0.3
RN7SKP187-201ENST00000365536 RIMBP3BA6NNM3 1639 aa13.18□□□□□ -0.3
RN7SKP187-201ENST00000365536 RIMBP3Q9UFD9 1639 aa13.18□□□□□ -0.3
RN7SKP187-201ENST00000365536 ARHGEF11O15085 1522 aa13.12□□□□□ -0.31
RN7SKP187-201ENST00000365536 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
RN7SKP187-201ENST00000365536 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
RN7SKP187-201ENST00000365536 CYB5RLQ6IPT4 315 aa13.05□□□□□ -0.32
RN7SKP187-201ENST00000365536 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
RN7SKP187-201ENST00000365536 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
RN7SKP187-201ENST00000365536 URB2Q14146 1524 aaKnown RBP12.96□□□□□ -0.33
RN7SKP187-201ENST00000365536 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
RN7SKP187-201ENST00000365536 CFTRP13569 1480 aa12.93□□□□□ -0.34
RN7SKP187-201ENST00000365536 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
RN7SKP187-201ENST00000365536 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP187-201ENST00000365536 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP187-201ENST00000365536 EIF4G3O43432 1585 aaKnown RBP12.77□□□□□ -0.36
RN7SKP187-201ENST00000365536 WIZO95785 1651 aa12.76□□□□□ -0.37
RN7SKP187-201ENST00000365536 FBLN2P98095 1184 aa12.72□□□□□ -0.37
RN7SKP187-201ENST00000365536 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
RN7SKP187-201ENST00000365536 CHD1O14646 1710 aa12.71□□□□□ -0.37
RN7SKP187-201ENST00000365536 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
RN7SKP187-201ENST00000365536 AQRO60306 1485 aaKnown RBP eCLIP12.7□□□□□ -0.38
RN7SKP187-201ENST00000365536 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
RN7SKP187-201ENST00000365536 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
RN7SKP187-201ENST00000365536 TOP2AP11388 1531 aaKnown RBP12.63□□□□□ -0.39
RN7SKP187-201ENST00000365536 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
RN7SKP187-201ENST00000365536 DNMBPQ6XZF7 1577 aa12.61□□□□□ -0.39
RN7SKP187-201ENST00000365536 SYNJ1O43426 1573 aa12.6□□□□□ -0.39
RN7SKP187-201ENST00000365536 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
RN7SKP187-201ENST00000365536 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
RN7SKP187-201ENST00000365536 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
RN7SKP187-201ENST00000365536 SNAPC4Q5SXM2 1469 aa12.57□□□□□ -0.4
RN7SKP187-201ENST00000365536 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
RN7SKP187-201ENST00000365536 MAGI1Q96QZ7 1491 aaPredicted RBP12.53□□□□□ -0.4
RN7SKP187-201ENST00000365536 TDRD9Q8NDG6 1382 aaKnown RBP12.53□□□□□ -0.4
RN7SKP187-201ENST00000365536 WDR97A6NE52 1622 aa12.51□□□□□ -0.41
RN7SKP187-201ENST00000365536 SYNJ2O15056 1496 aa12.5□□□□□ -0.41
RN7SKP187-201ENST00000365536 RAD54L2Q9Y4B4 1467 aa12.49□□□□□ -0.41
RN7SKP187-201ENST00000365536 CCDC88BA6NC98 1476 aa12.48□□□□□ -0.41
RN7SKP187-201ENST00000365536 SOGA1O94964 1423 aa12.48□□□□□ -0.41
RN7SKP187-201ENST00000365536 KDM4FA0A1W2PPD8 638 aa12.47□□□□□ -0.41
RN7SKP187-201ENST00000365536 GRIN2BQ13224 1484 aa12.46□□□□□ -0.41
RN7SKP187-201ENST00000365536 FGD5Q6ZNL6 1462 aa12.37□□□□□ -0.43
RN7SKP187-201ENST00000365536 ERCC6L2Q5T890 1561 aa12.37□□□□□ -0.43
RN7SKP187-201ENST00000365536 KIF13AQ9H1H9 1805 aa12.34□□□□□ -0.43
RN7SKP187-201ENST00000365536 ABCC10Q5T3U5 1492 aa12.34□□□□□ -0.43
RN7SKP187-201ENST00000365536 FAM69CQ0P6D2 419 aa12.33□□□□□ -0.44
RN7SKP187-201ENST00000365536 CEP170Q5SW79 1584 aa12.33□□□□□ -0.44
RN7SKP187-201ENST00000365536 KDM6BO15054 1643 aa12.29□□□□□ -0.44
RN7SKP187-201ENST00000365536 NUP160Q12769 1436 aa12.29□□□□□ -0.44
RN7SKP187-201ENST00000365536 GRIN2AQ12879 1464 aa12.29□□□□□ -0.44
RN7SKP187-201ENST00000365536 MAPKBP1O60336 1514 aa12.27□□□□□ -0.44
RN7SKP187-201ENST00000365536 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
RN7SKP187-201ENST00000365536 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
RN7SKP187-201ENST00000365536 CUX1P39880 1505 aa12.26□□□□□ -0.45
RN7SKP187-201ENST00000365536 FBXO41Q8TF61 875 aa12.25□□□□□ -0.45
RN7SKP187-201ENST00000365536 DIP2BQ9P265 1576 aa12.25□□□□□ -0.45
RN7SKP187-201ENST00000365536 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
RN7SKP187-201ENST00000365536 HECW2Q9P2P5 1572 aa12.24□□□□□ -0.45
RN7SKP187-201ENST00000365536 ADGRL1O94910 1474 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms