RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
RNU1-55P-201ENST00000365510 ABCC9O60706 1549 aa14.68□□□□□ -0.06
RNU1-55P-201ENST00000365510 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
RNU1-55P-201ENST00000365510 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
RNU1-55P-201ENST00000365510 DCAF8L2P0C7V8 631 aa13.86□□□□□ -0.19
RNU1-55P-201ENST00000365510 PABPN1Q86U42 306 aaKnown RBP eCLIP13.79□□□□□ -0.2
RNU1-55P-201ENST00000365510 RB1CC1Q8TDY2 1594 aa13.67□□□□□ -0.22
RNU1-55P-201ENST00000365510 NACADO15069 1562 aa13.52□□□□□ -0.25
RNU1-55P-201ENST00000365510 UNC13AQ9UPW8 1703 aa13.46□□□□□ -0.25
RNU1-55P-201ENST00000365510 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
RNU1-55P-201ENST00000365510 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
RNU1-55P-201ENST00000365510 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
RNU1-55P-201ENST00000365510 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
RNU1-55P-201ENST00000365510 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
RNU1-55P-201ENST00000365510 CC2D2AQ9P2K1 1620 aa13.15□□□□□ -0.3
RNU1-55P-201ENST00000365510 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
RNU1-55P-201ENST00000365510 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
RNU1-55P-201ENST00000365510 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
RNU1-55P-201ENST00000365510 SHROOM4Q9ULL8 1493 aa12.89□□□□□ -0.35
RNU1-55P-201ENST00000365510 NESP48681 1621 aa12.59□□□□□ -0.39
RNU1-55P-201ENST00000365510 ERCC6Q03468 1493 aa12.58□□□□□ -0.4
RNU1-55P-201ENST00000365510 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
RNU1-55P-201ENST00000365510 ATAD2BQ9ULI0 1458 aa12.55□□□□□ -0.4
RNU1-55P-201ENST00000365510 CUX2O14529 1486 aa12.49□□□□□ -0.41
RNU1-55P-201ENST00000365510 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
RNU1-55P-201ENST00000365510 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
RNU1-55P-201ENST00000365510 BAZ1BQ9UIG0 1483 aaKnown RBP12.38□□□□□ -0.43
RNU1-55P-201ENST00000365510 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
RNU1-55P-201ENST00000365510 MROH2BQ7Z745 1585 aa12.37□□□□□ -0.43
RNU1-55P-201ENST00000365510 HMGXB3Q12766 1538 aa12.35□□□□□ -0.43
RNU1-55P-201ENST00000365510 THOC2Q8NI27 1593 aaKnown RBP12.3□□□□□ -0.44
RNU1-55P-201ENST00000365510 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
RNU1-55P-201ENST00000365510 KIF21AQ7Z4S6 1674 aa12.29□□□□□ -0.44
RNU1-55P-201ENST00000365510 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
RNU1-55P-201ENST00000365510 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
RNU1-55P-201ENST00000365510 PDS5BQ9NTI5 1447 aa12.22□□□□□ -0.45
RNU1-55P-201ENST00000365510 CADPSQ9ULU8 1353 aa12.22□□□□□ -0.45
RNU1-55P-201ENST00000365510 WIZO95785 1651 aa12.22□□□□□ -0.45
RNU1-55P-201ENST00000365510 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
RNU1-55P-201ENST00000365510 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
RNU1-55P-201ENST00000365510 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
RNU1-55P-201ENST00000365510 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.48
RNU1-55P-201ENST00000365510 WDR62O43379 1518 aa12.07□□□□□ -0.48
RNU1-55P-201ENST00000365510 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
RNU1-55P-201ENST00000365510 CEP164Q9UPV0 1460 aa12.05□□□□□ -0.48
RNU1-55P-201ENST00000365510 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
RNU1-55P-201ENST00000365510 CFTRP13569 1480 aa12□□□□□ -0.49
RNU1-55P-201ENST00000365510 ZNF608Q9ULD9 1512 aaPredicted RBP11.97□□□□□ -0.49
RNU1-55P-201ENST00000365510 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.49
RNU1-55P-201ENST00000365510 CYB5RLQ6IPT4 315 aa11.93□□□□□ -0.5
RNU1-55P-201ENST00000365510 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
RNU1-55P-201ENST00000365510 RIMBP3CA6NJZ7 1639 aa11.89□□□□□ -0.51
RNU1-55P-201ENST00000365510 RIMBP3BA6NNM3 1639 aa11.89□□□□□ -0.51
RNU1-55P-201ENST00000365510 RIMBP3Q9UFD9 1639 aa11.89□□□□□ -0.51
RNU1-55P-201ENST00000365510 FBLN2P98095 1184 aa11.88□□□□□ -0.51
RNU1-55P-201ENST00000365510 AQRO60306 1485 aaKnown RBP eCLIP11.86□□□□□ -0.51
RNU1-55P-201ENST00000365510 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
RNU1-55P-201ENST00000365510 TRHP20396 242 aaPredicted RBP11.83□□□□□ -0.52
RNU1-55P-201ENST00000365510 ARHGEF11O15085 1522 aa11.81□□□□□ -0.52
RNU1-55P-201ENST00000365510 IFT140Q96RY7 1462 aa11.81□□□□□ -0.52
RNU1-55P-201ENST00000365510 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
RNU1-55P-201ENST00000365510 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
RNU1-55P-201ENST00000365510 EIF4G3O43432 1585 aaKnown RBP11.74□□□□□ -0.53
RNU1-55P-201ENST00000365510 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
RNU1-55P-201ENST00000365510 CHD1O14646 1710 aa11.73□□□□□ -0.53
RNU1-55P-201ENST00000365510 ARAP1Q96P48 1450 aa11.72□□□□□ -0.53
RNU1-55P-201ENST00000365510 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.54
RNU1-55P-201ENST00000365510 SOGA1O94964 1423 aa11.7□□□□□ -0.54
RNU1-55P-201ENST00000365510 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
RNU1-55P-201ENST00000365510 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
RNU1-55P-201ENST00000365510 CHMP7Q8WUX9 453 aaPredicted RBP11.67□□□□□ -0.54
RNU1-55P-201ENST00000365510 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
RNU1-55P-201ENST00000365510 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
RNU1-55P-201ENST00000365510 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
RNU1-55P-201ENST00000365510 CUX1P39880 1505 aa11.6□□□□□ -0.55
RNU1-55P-201ENST00000365510 AEBP2Q6ZN18 517 aaPredicted RBP11.55□□□□□ -0.56
RNU1-55P-201ENST00000365510 CLASP1Q7Z460 1538 aa11.55□□□□□ -0.56
RNU1-55P-201ENST00000365510 ERCC6L2Q5T890 1561 aa11.53□□□□□ -0.56
RNU1-55P-201ENST00000365510 GRIN2BQ13224 1484 aa11.52□□□□□ -0.56
RNU1-55P-201ENST00000365510 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
RNU1-55P-201ENST00000365510 SYNJ2O15056 1496 aa11.49□□□□□ -0.57
RNU1-55P-201ENST00000365510 MAGI1Q96QZ7 1491 aaPredicted RBP11.48□□□□□ -0.57
RNU1-55P-201ENST00000365510 SYNJ1O43426 1573 aa11.48□□□□□ -0.57
RNU1-55P-201ENST00000365510 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
RNU1-55P-201ENST00000365510 PBRM1Q86U86 1689 aa11.44□□□□□ -0.58
RNU1-55P-201ENST00000365510 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
RNU1-55P-201ENST00000365510 CHIC1Q5VXU3 224 aa11.42□□□□□ -0.58
RNU1-55P-201ENST00000365510 ABCA10Q8WWZ4 1543 aa11.41□□□□□ -0.58
RNU1-55P-201ENST00000365510 CEP170Q5SW79 1584 aa11.39□□□□□ -0.59
RNU1-55P-201ENST00000365510 TOP2BQ02880 1626 aa11.38□□□□□ -0.59
RNU1-55P-201ENST00000365510 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
RNU1-55P-201ENST00000365510 GRIN2AQ12879 1464 aa11.38□□□□□ -0.59
RNU1-55P-201ENST00000365510 BIVM-ERCC5R4GMW8 1640 aa11.38□□□□□ -0.59
RNU1-55P-201ENST00000365510 JPH4Q96JJ6 628 aa11.37□□□□□ -0.59
RNU1-55P-201ENST00000365510 TTBK1Q5TCY1 1321 aaPredicted RBP11.36□□□□□ -0.59
RNU1-55P-201ENST00000365510 NUP160Q12769 1436 aa11.35□□□□□ -0.59
RNU1-55P-201ENST00000365510 FAM69CQ0P6D2 419 aa11.34□□□□□ -0.59
RNU1-55P-201ENST00000365510 PRG4Q92954 1404 aaPredicted RBP11.34□□□□□ -0.59
RNU1-55P-201ENST00000365510 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
RNU1-55P-201ENST00000365510 ADAMTS12P58397 1594 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms