RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
RN7SKP249-201ENST00000365490 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.83
RN7SKP249-201ENST00000365490 ABCC9O60706 1549 aa19.38■□□□□ 0.69
RN7SKP249-201ENST00000365490 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
RN7SKP249-201ENST00000365490 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
RN7SKP249-201ENST00000365490 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
RN7SKP249-201ENST00000365490 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
RN7SKP249-201ENST00000365490 NACADO15069 1562 aa18.97■□□□□ 0.63
RN7SKP249-201ENST00000365490 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
RN7SKP249-201ENST00000365490 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
RN7SKP249-201ENST00000365490 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
RN7SKP249-201ENST00000365490 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
RN7SKP249-201ENST00000365490 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
RN7SKP249-201ENST00000365490 PABPN1Q86U42 306 aaKnown RBP eCLIP18.19■□□□□ 0.5
RN7SKP249-201ENST00000365490 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
RN7SKP249-201ENST00000365490 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
RN7SKP249-201ENST00000365490 EIF4G1Q04637 1599 aaKnown RBP17.76■□□□□ 0.43
RN7SKP249-201ENST00000365490 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
RN7SKP249-201ENST00000365490 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
RN7SKP249-201ENST00000365490 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
RN7SKP249-201ENST00000365490 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
RN7SKP249-201ENST00000365490 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.4
RN7SKP249-201ENST00000365490 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
RN7SKP249-201ENST00000365490 WIZO95785 1651 aa17.55■□□□□ 0.4
RN7SKP249-201ENST00000365490 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
RN7SKP249-201ENST00000365490 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
RN7SKP249-201ENST00000365490 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
RN7SKP249-201ENST00000365490 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
RN7SKP249-201ENST00000365490 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
RN7SKP249-201ENST00000365490 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
RN7SKP249-201ENST00000365490 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
RN7SKP249-201ENST00000365490 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
RN7SKP249-201ENST00000365490 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
RN7SKP249-201ENST00000365490 CFTRP13569 1480 aa17■□□□□ 0.31
RN7SKP249-201ENST00000365490 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
RN7SKP249-201ENST00000365490 NESP48681 1621 aa16.91■□□□□ 0.3
RN7SKP249-201ENST00000365490 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
RN7SKP249-201ENST00000365490 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
RN7SKP249-201ENST00000365490 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
RN7SKP249-201ENST00000365490 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
RN7SKP249-201ENST00000365490 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
RN7SKP249-201ENST00000365490 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
RN7SKP249-201ENST00000365490 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
RN7SKP249-201ENST00000365490 CHIC1Q5VXU3 224 aa16.64■□□□□ 0.25
RN7SKP249-201ENST00000365490 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
RN7SKP249-201ENST00000365490 CUX1P39880 1505 aa16.61■□□□□ 0.25
RN7SKP249-201ENST00000365490 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
RN7SKP249-201ENST00000365490 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
RN7SKP249-201ENST00000365490 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
RN7SKP249-201ENST00000365490 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
RN7SKP249-201ENST00000365490 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
RN7SKP249-201ENST00000365490 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
RN7SKP249-201ENST00000365490 THOC2Q8NI27 1593 aaKnown RBP16.57■□□□□ 0.24
RN7SKP249-201ENST00000365490 TOPBP1Q92547 1522 aa16.57■□□□□ 0.24
RN7SKP249-201ENST00000365490 WDR62O43379 1518 aa16.56■□□□□ 0.24
RN7SKP249-201ENST00000365490 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
RN7SKP249-201ENST00000365490 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
RN7SKP249-201ENST00000365490 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
RN7SKP249-201ENST00000365490 CUX2O14529 1486 aa16.42■□□□□ 0.22
RN7SKP249-201ENST00000365490 SOGA1O94964 1423 aa16.41■□□□□ 0.22
RN7SKP249-201ENST00000365490 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
RN7SKP249-201ENST00000365490 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
RN7SKP249-201ENST00000365490 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
RN7SKP249-201ENST00000365490 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
RN7SKP249-201ENST00000365490 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
RN7SKP249-201ENST00000365490 KIF27Q86VH2 1401 aa16.28■□□□□ 0.2
RN7SKP249-201ENST00000365490 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
RN7SKP249-201ENST00000365490 EEA1Q15075 1411 aa16.26■□□□□ 0.19
RN7SKP249-201ENST00000365490 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
RN7SKP249-201ENST00000365490 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
RN7SKP249-201ENST00000365490 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
RN7SKP249-201ENST00000365490 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
RN7SKP249-201ENST00000365490 AQRO60306 1485 aaKnown RBP eCLIP16.21■□□□□ 0.19
RN7SKP249-201ENST00000365490 IGF1RP08069 1367 aa16.19■□□□□ 0.18
RN7SKP249-201ENST00000365490 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
RN7SKP249-201ENST00000365490 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
RN7SKP249-201ENST00000365490 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
RN7SKP249-201ENST00000365490 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
RN7SKP249-201ENST00000365490 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
RN7SKP249-201ENST00000365490 PBRM1Q86U86 1689 aa16.13■□□□□ 0.17
RN7SKP249-201ENST00000365490 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
RN7SKP249-201ENST00000365490 CUL7Q14999 1698 aa16.08■□□□□ 0.17
RN7SKP249-201ENST00000365490 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
RN7SKP249-201ENST00000365490 MAGI1Q96QZ7 1491 aaPredicted RBP16.07■□□□□ 0.16
RN7SKP249-201ENST00000365490 KIF21BO75037 1637 aa16.05■□□□□ 0.16
RN7SKP249-201ENST00000365490 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
RN7SKP249-201ENST00000365490 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
RN7SKP249-201ENST00000365490 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
RN7SKP249-201ENST00000365490 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
RN7SKP249-201ENST00000365490 SYNJ2O15056 1496 aa16■□□□□ 0.15
RN7SKP249-201ENST00000365490 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
RN7SKP249-201ENST00000365490 GRIN2AQ12879 1464 aa15.95■□□□□ 0.14
RN7SKP249-201ENST00000365490 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
RN7SKP249-201ENST00000365490 CHMP7Q8WUX9 453 aaPredicted RBP15.94■□□□□ 0.14
RN7SKP249-201ENST00000365490 CHD1O14646 1710 aa15.9■□□□□ 0.14
RN7SKP249-201ENST00000365490 NUP160Q12769 1436 aa15.88■□□□□ 0.13
RN7SKP249-201ENST00000365490 FBLN2P98095 1184 aa15.88■□□□□ 0.13
RN7SKP249-201ENST00000365490 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
RN7SKP249-201ENST00000365490 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
RN7SKP249-201ENST00000365490 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms