RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
RN7SKP249-201ENST00000365490 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.83
RN7SKP249-201ENST00000365490 ABCC9O60706 1549 aa19.38■□□□□ 0.69
RN7SKP249-201ENST00000365490 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
RN7SKP249-201ENST00000365490 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
RN7SKP249-201ENST00000365490 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
RN7SKP249-201ENST00000365490 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
RN7SKP249-201ENST00000365490 NACADO15069 1562 aa18.97■□□□□ 0.63
RN7SKP249-201ENST00000365490 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
RN7SKP249-201ENST00000365490 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
RN7SKP249-201ENST00000365490 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
RN7SKP249-201ENST00000365490 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
RN7SKP249-201ENST00000365490 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
RN7SKP249-201ENST00000365490 PABPN1Q86U42 306 aaKnown RBP eCLIP18.19■□□□□ 0.5
RN7SKP249-201ENST00000365490 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
RN7SKP249-201ENST00000365490 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
RN7SKP249-201ENST00000365490 EIF4G1Q04637 1599 aaKnown RBP17.76■□□□□ 0.43
RN7SKP249-201ENST00000365490 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
RN7SKP249-201ENST00000365490 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
RN7SKP249-201ENST00000365490 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
RN7SKP249-201ENST00000365490 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
RN7SKP249-201ENST00000365490 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.4
RN7SKP249-201ENST00000365490 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
RN7SKP249-201ENST00000365490 WIZO95785 1651 aa17.55■□□□□ 0.4
RN7SKP249-201ENST00000365490 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
RN7SKP249-201ENST00000365490 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
RN7SKP249-201ENST00000365490 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
RN7SKP249-201ENST00000365490 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
RN7SKP249-201ENST00000365490 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
RN7SKP249-201ENST00000365490 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
RN7SKP249-201ENST00000365490 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
RN7SKP249-201ENST00000365490 CCDC88BA6NC98 1476 aa17.2■□□□□ 0.34
RN7SKP249-201ENST00000365490 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
RN7SKP249-201ENST00000365490 CFTRP13569 1480 aa17■□□□□ 0.31
RN7SKP249-201ENST00000365490 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
RN7SKP249-201ENST00000365490 NESP48681 1621 aa16.91■□□□□ 0.3
RN7SKP249-201ENST00000365490 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
RN7SKP249-201ENST00000365490 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
RN7SKP249-201ENST00000365490 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
RN7SKP249-201ENST00000365490 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
RN7SKP249-201ENST00000365490 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
RN7SKP249-201ENST00000365490 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
RN7SKP249-201ENST00000365490 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
RN7SKP249-201ENST00000365490 CHIC1Q5VXU3 224 aa16.64■□□□□ 0.25
RN7SKP249-201ENST00000365490 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
RN7SKP249-201ENST00000365490 CUX1P39880 1505 aa16.61■□□□□ 0.25
RN7SKP249-201ENST00000365490 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
RN7SKP249-201ENST00000365490 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
RN7SKP249-201ENST00000365490 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
RN7SKP249-201ENST00000365490 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
RN7SKP249-201ENST00000365490 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
RN7SKP249-201ENST00000365490 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
RN7SKP249-201ENST00000365490 THOC2Q8NI27 1593 aaKnown RBP16.57■□□□□ 0.24
RN7SKP249-201ENST00000365490 TOPBP1Q92547 1522 aa16.57■□□□□ 0.24
RN7SKP249-201ENST00000365490 WDR62O43379 1518 aa16.56■□□□□ 0.24
RN7SKP249-201ENST00000365490 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
RN7SKP249-201ENST00000365490 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
RN7SKP249-201ENST00000365490 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
RN7SKP249-201ENST00000365490 CUX2O14529 1486 aa16.42■□□□□ 0.22
RN7SKP249-201ENST00000365490 SOGA1O94964 1423 aa16.41■□□□□ 0.22
RN7SKP249-201ENST00000365490 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
RN7SKP249-201ENST00000365490 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
RN7SKP249-201ENST00000365490 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
RN7SKP249-201ENST00000365490 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
RN7SKP249-201ENST00000365490 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
RN7SKP249-201ENST00000365490 KIF27Q86VH2 1401 aa16.28■□□□□ 0.2
RN7SKP249-201ENST00000365490 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
RN7SKP249-201ENST00000365490 EEA1Q15075 1411 aa16.26■□□□□ 0.19
RN7SKP249-201ENST00000365490 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
RN7SKP249-201ENST00000365490 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
RN7SKP249-201ENST00000365490 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
RN7SKP249-201ENST00000365490 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
RN7SKP249-201ENST00000365490 AQRO60306 1485 aaKnown RBP eCLIP16.21■□□□□ 0.19
RN7SKP249-201ENST00000365490 IGF1RP08069 1367 aa16.19■□□□□ 0.18
RN7SKP249-201ENST00000365490 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
RN7SKP249-201ENST00000365490 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
RN7SKP249-201ENST00000365490 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
RN7SKP249-201ENST00000365490 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
RN7SKP249-201ENST00000365490 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
RN7SKP249-201ENST00000365490 PBRM1Q86U86 1689 aa16.13■□□□□ 0.17
RN7SKP249-201ENST00000365490 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
RN7SKP249-201ENST00000365490 CUL7Q14999 1698 aa16.08■□□□□ 0.17
RN7SKP249-201ENST00000365490 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
RN7SKP249-201ENST00000365490 MAGI1Q96QZ7 1491 aaPredicted RBP16.07■□□□□ 0.16
RN7SKP249-201ENST00000365490 KIF21BO75037 1637 aa16.05■□□□□ 0.16
RN7SKP249-201ENST00000365490 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
RN7SKP249-201ENST00000365490 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
RN7SKP249-201ENST00000365490 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
RN7SKP249-201ENST00000365490 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
RN7SKP249-201ENST00000365490 SYNJ2O15056 1496 aa16■□□□□ 0.15
RN7SKP249-201ENST00000365490 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
RN7SKP249-201ENST00000365490 GRIN2AQ12879 1464 aa15.95■□□□□ 0.14
RN7SKP249-201ENST00000365490 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
RN7SKP249-201ENST00000365490 CHMP7Q8WUX9 453 aaPredicted RBP15.94■□□□□ 0.14
RN7SKP249-201ENST00000365490 CHD1O14646 1710 aa15.9■□□□□ 0.14
RN7SKP249-201ENST00000365490 NUP160Q12769 1436 aa15.88■□□□□ 0.13
RN7SKP249-201ENST00000365490 FBLN2P98095 1184 aa15.88■□□□□ 0.13
RN7SKP249-201ENST00000365490 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
RN7SKP249-201ENST00000365490 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
RN7SKP249-201ENST00000365490 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms