RNA–Protein interactions for RNA: ENST00000365477.1

RNU1-16P-201, Transcript of RNA, U1 small nuclear 16, pseudogene, humanhuman

BASIC

Gene RNU1-16P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-16P-201ENST00000365477 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
RNU1-16P-201ENST00000365477 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
RNU1-16P-201ENST00000365477 ABCC9O60706 1549 aa16.31■□□□□ 0.2
RNU1-16P-201ENST00000365477 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
RNU1-16P-201ENST00000365477 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
RNU1-16P-201ENST00000365477 NACADO15069 1562 aa15.52■□□□□ 0.07
RNU1-16P-201ENST00000365477 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
RNU1-16P-201ENST00000365477 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
RNU1-16P-201ENST00000365477 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
RNU1-16P-201ENST00000365477 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
RNU1-16P-201ENST00000365477 UNC13AQ9UPW8 1703 aa15.23■□□□□ 0.03
RNU1-16P-201ENST00000365477 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
RNU1-16P-201ENST00000365477 BICRAQ9NZM4 1560 aa15.15■□□□□ 0.02
RNU1-16P-201ENST00000365477 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
RNU1-16P-201ENST00000365477 SHROOM4Q9ULL8 1493 aa14.86□□□□□ -0.03
RNU1-16P-201ENST00000365477 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
RNU1-16P-201ENST00000365477 CC2D2AQ9P2K1 1620 aa14.69□□□□□ -0.06
RNU1-16P-201ENST00000365477 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
RNU1-16P-201ENST00000365477 SMARCA4P51532 1647 aa14.45□□□□□ -0.1
RNU1-16P-201ENST00000365477 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
RNU1-16P-201ENST00000365477 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
RNU1-16P-201ENST00000365477 ATAD2BQ9ULI0 1458 aa14.38□□□□□ -0.11
RNU1-16P-201ENST00000365477 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
RNU1-16P-201ENST00000365477 SMARCA2P51531 1590 aa14.32□□□□□ -0.12
RNU1-16P-201ENST00000365477 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.12
RNU1-16P-201ENST00000365477 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
RNU1-16P-201ENST00000365477 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
RNU1-16P-201ENST00000365477 WIZO95785 1651 aa14.24□□□□□ -0.13
RNU1-16P-201ENST00000365477 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
RNU1-16P-201ENST00000365477 NESP48681 1621 aa14.12□□□□□ -0.15
RNU1-16P-201ENST00000365477 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
RNU1-16P-201ENST00000365477 ERCC6Q03468 1493 aa14.02□□□□□ -0.16
RNU1-16P-201ENST00000365477 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
RNU1-16P-201ENST00000365477 CADPSQ9ULU8 1353 aa13.95□□□□□ -0.18
RNU1-16P-201ENST00000365477 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
RNU1-16P-201ENST00000365477 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
RNU1-16P-201ENST00000365477 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
RNU1-16P-201ENST00000365477 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
RNU1-16P-201ENST00000365477 CFTRP13569 1480 aa13.85□□□□□ -0.19
RNU1-16P-201ENST00000365477 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.2
RNU1-16P-201ENST00000365477 FANCD2Q9BXW9 1451 aa13.81□□□□□ -0.2
RNU1-16P-201ENST00000365477 CUX2O14529 1486 aa13.8□□□□□ -0.2
RNU1-16P-201ENST00000365477 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
RNU1-16P-201ENST00000365477 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
RNU1-16P-201ENST00000365477 WDR62O43379 1518 aa13.7□□□□□ -0.22
RNU1-16P-201ENST00000365477 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
RNU1-16P-201ENST00000365477 PRDM2Q13029 1718 aa13.68□□□□□ -0.22
RNU1-16P-201ENST00000365477 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
RNU1-16P-201ENST00000365477 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
RNU1-16P-201ENST00000365477 CUX1P39880 1505 aa13.5□□□□□ -0.25
RNU1-16P-201ENST00000365477 ZNF608Q9ULD9 1512 aaPredicted RBP13.5□□□□□ -0.25
RNU1-16P-201ENST00000365477 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
RNU1-16P-201ENST00000365477 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
RNU1-16P-201ENST00000365477 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
RNU1-16P-201ENST00000365477 RAD54L2Q9Y4B4 1467 aa13.47□□□□□ -0.25
RNU1-16P-201ENST00000365477 DNAJC5Q9H3Z4 198 aa13.46□□□□□ -0.25
RNU1-16P-201ENST00000365477 FGD5Q6ZNL6 1462 aa13.45□□□□□ -0.26
RNU1-16P-201ENST00000365477 SOGA1O94964 1423 aa13.43□□□□□ -0.26
RNU1-16P-201ENST00000365477 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
RNU1-16P-201ENST00000365477 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
RNU1-16P-201ENST00000365477 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
RNU1-16P-201ENST00000365477 EIF4G3O43432 1585 aaKnown RBP13.4□□□□□ -0.26
RNU1-16P-201ENST00000365477 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
RNU1-16P-201ENST00000365477 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
RNU1-16P-201ENST00000365477 TOP2BQ02880 1626 aa13.33□□□□□ -0.28
RNU1-16P-201ENST00000365477 BIVM-ERCC5R4GMW8 1640 aa13.31□□□□□ -0.28
RNU1-16P-201ENST00000365477 FBLN2P98095 1184 aa13.3□□□□□ -0.28
RNU1-16P-201ENST00000365477 WDR97A6NE52 1622 aa13.29□□□□□ -0.28
RNU1-16P-201ENST00000365477 SNAPC4Q5SXM2 1469 aa13.28□□□□□ -0.28
RNU1-16P-201ENST00000365477 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
RNU1-16P-201ENST00000365477 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
RNU1-16P-201ENST00000365477 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
RNU1-16P-201ENST00000365477 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
RNU1-16P-201ENST00000365477 CHD1O14646 1710 aa13.23□□□□□ -0.29
RNU1-16P-201ENST00000365477 ABCA5Q8WWZ7 1642 aa13.23□□□□□ -0.29
RNU1-16P-201ENST00000365477 PBRM1Q86U86 1689 aa13.21□□□□□ -0.29
RNU1-16P-201ENST00000365477 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
RNU1-16P-201ENST00000365477 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
RNU1-16P-201ENST00000365477 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
RNU1-16P-201ENST00000365477 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
RNU1-16P-201ENST00000365477 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
RNU1-16P-201ENST00000365477 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
RNU1-16P-201ENST00000365477 FHAD1B1AJZ9 1412 aa13.09□□□□□ -0.31
RNU1-16P-201ENST00000365477 KIF27Q86VH2 1401 aa13.09□□□□□ -0.31
RNU1-16P-201ENST00000365477 RIMBP3CA6NJZ7 1639 aa13.09□□□□□ -0.31
RNU1-16P-201ENST00000365477 RIMBP3BA6NNM3 1639 aa13.09□□□□□ -0.31
RNU1-16P-201ENST00000365477 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
RNU1-16P-201ENST00000365477 GRIN2AQ12879 1464 aa13.09□□□□□ -0.31
RNU1-16P-201ENST00000365477 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
RNU1-16P-201ENST00000365477 CLASP1Q7Z460 1538 aa13.07□□□□□ -0.32
RNU1-16P-201ENST00000365477 RUSC2Q8N2Y8 1516 aa13.07□□□□□ -0.32
RNU1-16P-201ENST00000365477 IGF1RP08069 1367 aa13.07□□□□□ -0.32
RNU1-16P-201ENST00000365477 CEP170Q5SW79 1584 aa13.05□□□□□ -0.32
RNU1-16P-201ENST00000365477 CYB5RLQ6IPT4 315 aa13.01□□□□□ -0.33
RNU1-16P-201ENST00000365477 NUP160Q12769 1436 aa13.01□□□□□ -0.33
RNU1-16P-201ENST00000365477 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
RNU1-16P-201ENST00000365477 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
RNU1-16P-201ENST00000365477 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
RNU1-16P-201ENST00000365477 CUL7Q14999 1698 aa12.97□□□□□ -0.33
RNU1-16P-201ENST00000365477 CHIC1Q5VXU3 224 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms