RNA–Protein interactions for RNA: ENST00000364814.1

RN7SKP239-201, Transcript of RNA, 7SK small nuclear pseudogene 239, humanhuman

BASIC

Gene RN7SKP239, Length 295 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP239-201ENST00000364814 NISCHQ9Y2I1 1504 aa19.92■□□□□ 0.78
RN7SKP239-201ENST00000364814 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
RN7SKP239-201ENST00000364814 ABCC9O60706 1549 aa16.73■□□□□ 0.27
RN7SKP239-201ENST00000364814 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
RN7SKP239-201ENST00000364814 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
RN7SKP239-201ENST00000364814 MYO15BQ96JP2 1530 aa16.47■□□□□ 0.23
RN7SKP239-201ENST00000364814 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
RN7SKP239-201ENST00000364814 NACADO15069 1562 aa16.42■□□□□ 0.22
RN7SKP239-201ENST00000364814 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
RN7SKP239-201ENST00000364814 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
RN7SKP239-201ENST00000364814 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
RN7SKP239-201ENST00000364814 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
RN7SKP239-201ENST00000364814 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
RN7SKP239-201ENST00000364814 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
RN7SKP239-201ENST00000364814 AEBP2Q6ZN18 517 aaPredicted RBP15.52■□□□□ 0.08
RN7SKP239-201ENST00000364814 CECR2Q9BXF3 1484 aa15.44■□□□□ 0.06
RN7SKP239-201ENST00000364814 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
RN7SKP239-201ENST00000364814 SMARCA4P51532 1647 aa15.37■□□□□ 0.05
RN7SKP239-201ENST00000364814 EIF4G1Q04637 1599 aaKnown RBP15.35■□□□□ 0.05
RN7SKP239-201ENST00000364814 MROH2BQ7Z745 1585 aa15.33■□□□□ 0.05
RN7SKP239-201ENST00000364814 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
RN7SKP239-201ENST00000364814 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
RN7SKP239-201ENST00000364814 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
RN7SKP239-201ENST00000364814 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
RN7SKP239-201ENST00000364814 SMARCA2P51531 1590 aa15.21■□□□□ 0.03
RN7SKP239-201ENST00000364814 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
RN7SKP239-201ENST00000364814 WIZO95785 1651 aa15.19■□□□□ 0.02
RN7SKP239-201ENST00000364814 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
RN7SKP239-201ENST00000364814 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
RN7SKP239-201ENST00000364814 HMGXB3Q12766 1538 aa15.1■□□□□ 0.01
RN7SKP239-201ENST00000364814 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
RN7SKP239-201ENST00000364814 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0.01
RN7SKP239-201ENST00000364814 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.01
RN7SKP239-201ENST00000364814 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
RN7SKP239-201ENST00000364814 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
RN7SKP239-201ENST00000364814 CFTRP13569 1480 aa14.7□□□□□ -0.06
RN7SKP239-201ENST00000364814 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
RN7SKP239-201ENST00000364814 PRDM2Q13029 1718 aa14.65□□□□□ -0.06
RN7SKP239-201ENST00000364814 NESP48681 1621 aa14.59□□□□□ -0.07
RN7SKP239-201ENST00000364814 PDS5BQ9NTI5 1447 aa14.57□□□□□ -0.08
RN7SKP239-201ENST00000364814 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
RN7SKP239-201ENST00000364814 CEP164Q9UPV0 1460 aa14.48□□□□□ -0.09
RN7SKP239-201ENST00000364814 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.1
RN7SKP239-201ENST00000364814 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
RN7SKP239-201ENST00000364814 ABCC8Q09428 1581 aa14.44□□□□□ -0.1
RN7SKP239-201ENST00000364814 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
RN7SKP239-201ENST00000364814 TRIM41Q8WV44 630 aa14.39□□□□□ -0.11
RN7SKP239-201ENST00000364814 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
RN7SKP239-201ENST00000364814 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
RN7SKP239-201ENST00000364814 BIVM-ERCC5R4GMW8 1640 aa14.37□□□□□ -0.11
RN7SKP239-201ENST00000364814 CUX1P39880 1505 aa14.37□□□□□ -0.11
RN7SKP239-201ENST00000364814 DNMBPQ6XZF7 1577 aa14.37□□□□□ -0.11
RN7SKP239-201ENST00000364814 SYNJ1O43426 1573 aa14.36□□□□□ -0.11
RN7SKP239-201ENST00000364814 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
RN7SKP239-201ENST00000364814 TOPBP1Q92547 1522 aa14.34□□□□□ -0.11
RN7SKP239-201ENST00000364814 WDR62O43379 1518 aa14.31□□□□□ -0.12
RN7SKP239-201ENST00000364814 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
RN7SKP239-201ENST00000364814 FGD5Q6ZNL6 1462 aa14.26□□□□□ -0.13
RN7SKP239-201ENST00000364814 POLA1P09884 1462 aaPredicted RBP14.25□□□□□ -0.13
RN7SKP239-201ENST00000364814 SOGA1O94964 1423 aa14.2□□□□□ -0.14
RN7SKP239-201ENST00000364814 ABCA10Q8WWZ4 1543 aa14.17□□□□□ -0.14
RN7SKP239-201ENST00000364814 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
RN7SKP239-201ENST00000364814 EEA1Q15075 1411 aa14.16□□□□□ -0.14
RN7SKP239-201ENST00000364814 CUX2O14529 1486 aa14.16□□□□□ -0.14
RN7SKP239-201ENST00000364814 RAD54L2Q9Y4B4 1467 aa14.15□□□□□ -0.14
RN7SKP239-201ENST00000364814 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
RN7SKP239-201ENST00000364814 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
RN7SKP239-201ENST00000364814 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
RN7SKP239-201ENST00000364814 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
RN7SKP239-201ENST00000364814 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
RN7SKP239-201ENST00000364814 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
RN7SKP239-201ENST00000364814 CSRNP3Q8WYN3 585 aa14.04□□□□□ -0.16
RN7SKP239-201ENST00000364814 TDRD9Q8NDG6 1382 aaKnown RBP14.04□□□□□ -0.16
RN7SKP239-201ENST00000364814 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
RN7SKP239-201ENST00000364814 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.16
RN7SKP239-201ENST00000364814 ERICH3Q5RHP9 1530 aa14.01□□□□□ -0.17
RN7SKP239-201ENST00000364814 EIF4G3O43432 1585 aaKnown RBP14□□□□□ -0.17
RN7SKP239-201ENST00000364814 AQRO60306 1485 aaKnown RBP eCLIP14□□□□□ -0.17
RN7SKP239-201ENST00000364814 IGF1RP08069 1367 aa14□□□□□ -0.17
RN7SKP239-201ENST00000364814 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
RN7SKP239-201ENST00000364814 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
RN7SKP239-201ENST00000364814 CUL7Q14999 1698 aa13.97□□□□□ -0.17
RN7SKP239-201ENST00000364814 PRXQ9BXM0 1461 aa13.95□□□□□ -0.18
RN7SKP239-201ENST00000364814 KIF21BO75037 1637 aa13.95□□□□□ -0.18
RN7SKP239-201ENST00000364814 CARMIL1Q5VZK9 1371 aa13.95□□□□□ -0.18
RN7SKP239-201ENST00000364814 MAGI1Q96QZ7 1491 aaPredicted RBP13.93□□□□□ -0.18
RN7SKP239-201ENST00000364814 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
RN7SKP239-201ENST00000364814 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
RN7SKP239-201ENST00000364814 GOLGA3Q08378 1498 aa13.9□□□□□ -0.18
RN7SKP239-201ENST00000364814 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
RN7SKP239-201ENST00000364814 ADAMTS12P58397 1594 aa13.89□□□□□ -0.19
RN7SKP239-201ENST00000364814 SYNJ2O15056 1496 aa13.86□□□□□ -0.19
RN7SKP239-201ENST00000364814 LOC105371045A0A1W2PR82 267 aa13.84□□□□□ -0.19
RN7SKP239-201ENST00000364814 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
RN7SKP239-201ENST00000364814 CHMP7Q8WUX9 453 aaPredicted RBP13.81□□□□□ -0.2
RN7SKP239-201ENST00000364814 TNIKQ9UKE5 1360 aa13.81□□□□□ -0.2
RN7SKP239-201ENST00000364814 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
RN7SKP239-201ENST00000364814 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
RN7SKP239-201ENST00000364814 FBLN2P98095 1184 aa13.76□□□□□ -0.21
RN7SKP239-201ENST00000364814 CHD1O14646 1710 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms