RNA–Protein interactions for RNA: ENST00000364711.1

RN7SKP78-201, Transcript of RNA, 7SK small nuclear pseudogene 78, humanhuman

BASIC

Gene RN7SKP78, Length 318 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP78-201ENST00000364711 NISCHQ9Y2I1 1504 aa15.45■□□□□ 0.06
RN7SKP78-201ENST00000364711 ABCC9O60706 1549 aa14.9□□□□□ -0.02
RN7SKP78-201ENST00000364711 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
RN7SKP78-201ENST00000364711 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
RN7SKP78-201ENST00000364711 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
RN7SKP78-201ENST00000364711 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
RN7SKP78-201ENST00000364711 DNAJC5Q9H3Z4 198 aa13.86□□□□□ -0.19
RN7SKP78-201ENST00000364711 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
RN7SKP78-201ENST00000364711 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
RN7SKP78-201ENST00000364711 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
RN7SKP78-201ENST00000364711 NACADO15069 1562 aa13.49□□□□□ -0.25
RN7SKP78-201ENST00000364711 CECR2Q9BXF3 1484 aa13.45□□□□□ -0.26
RN7SKP78-201ENST00000364711 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
RN7SKP78-201ENST00000364711 UNC13AQ9UPW8 1703 aa13.4□□□□□ -0.26
RN7SKP78-201ENST00000364711 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
RN7SKP78-201ENST00000364711 EIF4G1Q04637 1599 aaKnown RBP13.14□□□□□ -0.31
RN7SKP78-201ENST00000364711 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
RN7SKP78-201ENST00000364711 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
RN7SKP78-201ENST00000364711 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
RN7SKP78-201ENST00000364711 CUX2O14529 1486 aa13.01□□□□□ -0.33
RN7SKP78-201ENST00000364711 SCRIBQ14160 1630 aa12.89□□□□□ -0.35
RN7SKP78-201ENST00000364711 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
RN7SKP78-201ENST00000364711 ZCCHC6Q5VYS8 1495 aaKnown RBP12.64□□□□□ -0.39
RN7SKP78-201ENST00000364711 DCAF1Q9Y4B6 1507 aa12.63□□□□□ -0.39
RN7SKP78-201ENST00000364711 NESP48681 1621 aa12.61□□□□□ -0.39
RN7SKP78-201ENST00000364711 SENP3Q9H4L4 574 aaPredicted RBP12.57□□□□□ -0.4
RN7SKP78-201ENST00000364711 NCAPD3P42695 1498 aa12.51□□□□□ -0.41
RN7SKP78-201ENST00000364711 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
RN7SKP78-201ENST00000364711 SMARCA2P51531 1590 aa12.45□□□□□ -0.42
RN7SKP78-201ENST00000364711 PHF23Q9BUL5 403 aaPredicted RBP12.42□□□□□ -0.42
RN7SKP78-201ENST00000364711 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
RN7SKP78-201ENST00000364711 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
RN7SKP78-201ENST00000364711 BAZ1AQ9NRL2 1556 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP78-201ENST00000364711 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
RN7SKP78-201ENST00000364711 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
RN7SKP78-201ENST00000364711 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
RN7SKP78-201ENST00000364711 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
RN7SKP78-201ENST00000364711 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
RN7SKP78-201ENST00000364711 RIMBP3CA6NJZ7 1639 aa12.25□□□□□ -0.45
RN7SKP78-201ENST00000364711 RIMBP3BA6NNM3 1639 aa12.25□□□□□ -0.45
RN7SKP78-201ENST00000364711 RIMBP3Q9UFD9 1639 aa12.25□□□□□ -0.45
RN7SKP78-201ENST00000364711 BAZ1BQ9UIG0 1483 aaKnown RBP12.24□□□□□ -0.45
RN7SKP78-201ENST00000364711 MRC2Q9UBG0 1479 aa12.22□□□□□ -0.45
RN7SKP78-201ENST00000364711 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
RN7SKP78-201ENST00000364711 WDR62O43379 1518 aa12.18□□□□□ -0.46
RN7SKP78-201ENST00000364711 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
RN7SKP78-201ENST00000364711 ARHGEF11O15085 1522 aa12.16□□□□□ -0.46
RN7SKP78-201ENST00000364711 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
RN7SKP78-201ENST00000364711 CEP164Q9UPV0 1460 aa12.05□□□□□ -0.48
RN7SKP78-201ENST00000364711 ILDR1Q86SU0 546 aaPredicted RBP12.03□□□□□ -0.48
RN7SKP78-201ENST00000364711 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
RN7SKP78-201ENST00000364711 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
RN7SKP78-201ENST00000364711 FANCD2Q9BXW9 1451 aa12□□□□□ -0.49
RN7SKP78-201ENST00000364711 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
RN7SKP78-201ENST00000364711 ZNF608Q9ULD9 1512 aaPredicted RBP11.94□□□□□ -0.5
RN7SKP78-201ENST00000364711 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
RN7SKP78-201ENST00000364711 FBLN2P98095 1184 aa11.89□□□□□ -0.51
RN7SKP78-201ENST00000364711 CFTRP13569 1480 aa11.83□□□□□ -0.52
RN7SKP78-201ENST00000364711 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
RN7SKP78-201ENST00000364711 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP78-201ENST00000364711 CHD1O14646 1710 aa11.77□□□□□ -0.52
RN7SKP78-201ENST00000364711 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
RN7SKP78-201ENST00000364711 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
RN7SKP78-201ENST00000364711 WIZO95785 1651 aa11.74□□□□□ -0.53
RN7SKP78-201ENST00000364711 KDM4FA0A1W2PPD8 638 aa11.68□□□□□ -0.54
RN7SKP78-201ENST00000364711 TOPBP1Q92547 1522 aa11.68□□□□□ -0.54
RN7SKP78-201ENST00000364711 FOXD1Q16676 465 aa11.67□□□□□ -0.54
RN7SKP78-201ENST00000364711 CLASP1Q7Z460 1538 aa11.64□□□□□ -0.55
RN7SKP78-201ENST00000364711 CHMP7Q8WUX9 453 aaPredicted RBP11.63□□□□□ -0.55
RN7SKP78-201ENST00000364711 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
RN7SKP78-201ENST00000364711 TDRD9Q8NDG6 1382 aaKnown RBP11.6□□□□□ -0.55
RN7SKP78-201ENST00000364711 TARBP1Q13395 1621 aaKnown RBP11.59□□□□□ -0.55
RN7SKP78-201ENST00000364711 SNAPC4Q5SXM2 1469 aa11.57□□□□□ -0.56
RN7SKP78-201ENST00000364711 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
RN7SKP78-201ENST00000364711 RAD54L2Q9Y4B4 1467 aa11.55□□□□□ -0.56
RN7SKP78-201ENST00000364711 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
RN7SKP78-201ENST00000364711 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
RN7SKP78-201ENST00000364711 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.56
RN7SKP78-201ENST00000364711 TOP2AP11388 1531 aaKnown RBP11.5□□□□□ -0.57
RN7SKP78-201ENST00000364711 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
RN7SKP78-201ENST00000364711 FAM69CQ0P6D2 419 aa11.49□□□□□ -0.57
RN7SKP78-201ENST00000364711 SOGA1O94964 1423 aa11.49□□□□□ -0.57
RN7SKP78-201ENST00000364711 ERCC6L2Q5T890 1561 aa11.49□□□□□ -0.57
RN7SKP78-201ENST00000364711 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.58
RN7SKP78-201ENST00000364711 CCDC88BA6NC98 1476 aa11.45□□□□□ -0.58
RN7SKP78-201ENST00000364711 SYNJ2O15056 1496 aa11.45□□□□□ -0.58
RN7SKP78-201ENST00000364711 MAGI1Q96QZ7 1491 aaPredicted RBP11.45□□□□□ -0.58
RN7SKP78-201ENST00000364711 FBXO41Q8TF61 875 aa11.44□□□□□ -0.58
RN7SKP78-201ENST00000364711 GRIN2BQ13224 1484 aa11.43□□□□□ -0.58
RN7SKP78-201ENST00000364711 HECW2Q9P2P5 1572 aa11.41□□□□□ -0.58
RN7SKP78-201ENST00000364711 KDM6BO15054 1643 aa11.38□□□□□ -0.59
RN7SKP78-201ENST00000364711 ABCC10Q5T3U5 1492 aa11.37□□□□□ -0.59
RN7SKP78-201ENST00000364711 ADGRL1O94910 1474 aa11.36□□□□□ -0.59
RN7SKP78-201ENST00000364711 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
RN7SKP78-201ENST00000364711 LMTK3Q96Q04 1460 aa11.36□□□□□ -0.59
RN7SKP78-201ENST00000364711 CEP170Q5SW79 1584 aa11.35□□□□□ -0.59
RN7SKP78-201ENST00000364711 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
RN7SKP78-201ENST00000364711 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
RN7SKP78-201ENST00000364711 PLPPR3Q6T4P5 718 aa11.3□□□□□ -0.6
RN7SKP78-201ENST00000364711 DIP2BQ9P265 1576 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms