RNA–Protein interactions for RNA: ENST00000364688.1

RNVU1-6-201, Transcript of RNA, variant U1 small nuclear 6, humanhuman

BASIC

Gene RNVU1-6, Length 164 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-6-201ENST00000364688 NISCHQ9Y2I1 1504 aa13□□□□□ -0.33
RNVU1-6-201ENST00000364688 ABCC9O60706 1549 aa11.9□□□□□ -0.5
RNVU1-6-201ENST00000364688 CCDC180Q9P1Z9 1646 aa11.85□□□□□ -0.51
RNVU1-6-201ENST00000364688 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
RNVU1-6-201ENST00000364688 RB1CC1Q8TDY2 1594 aa11.28□□□□□ -0.6
RNVU1-6-201ENST00000364688 NACADO15069 1562 aa11.19□□□□□ -0.62
RNVU1-6-201ENST00000364688 UNC13AQ9UPW8 1703 aa11.17□□□□□ -0.62
RNVU1-6-201ENST00000364688 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
RNVU1-6-201ENST00000364688 MYO15BQ96JP2 1530 aa11.07□□□□□ -0.64
RNVU1-6-201ENST00000364688 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
RNVU1-6-201ENST00000364688 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
RNVU1-6-201ENST00000364688 CC2D2AQ9P2K1 1620 aa10.83□□□□□ -0.68
RNVU1-6-201ENST00000364688 DCAF1Q9Y4B6 1507 aa10.81□□□□□ -0.68
RNVU1-6-201ENST00000364688 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.68
RNVU1-6-201ENST00000364688 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.69
RNVU1-6-201ENST00000364688 CECR2Q9BXF3 1484 aa10.77□□□□□ -0.69
RNVU1-6-201ENST00000364688 DCAF8L2P0C7V8 631 aa10.64□□□□□ -0.71
RNVU1-6-201ENST00000364688 DNAJC5Q9H3Z4 198 aa10.64□□□□□ -0.71
RNVU1-6-201ENST00000364688 SCRIBQ14160 1630 aa10.63□□□□□ -0.71
RNVU1-6-201ENST00000364688 CUX2O14529 1486 aa10.44□□□□□ -0.74
RNVU1-6-201ENST00000364688 NCAPD3P42695 1498 aa10.35□□□□□ -0.75
RNVU1-6-201ENST00000364688 HMGXB3Q12766 1538 aa10.28□□□□□ -0.76
RNVU1-6-201ENST00000364688 THOC2Q8NI27 1593 aaKnown RBP10.28□□□□□ -0.76
RNVU1-6-201ENST00000364688 ATAD2BQ9ULI0 1458 aa10.26□□□□□ -0.77
RNVU1-6-201ENST00000364688 PEG3Q9GZU2 1588 aa10.22□□□□□ -0.77
RNVU1-6-201ENST00000364688 ERCC6Q03468 1493 aa10.21□□□□□ -0.78
RNVU1-6-201ENST00000364688 NESP48681 1621 aa10.21□□□□□ -0.78
RNVU1-6-201ENST00000364688 SMARCA4P51532 1647 aa10.21□□□□□ -0.78
RNVU1-6-201ENST00000364688 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
RNVU1-6-201ENST00000364688 LAMC3Q9Y6N6 1575 aa10.14□□□□□ -0.79
RNVU1-6-201ENST00000364688 KIF21AQ7Z4S6 1674 aa10.12□□□□□ -0.79
RNVU1-6-201ENST00000364688 BAZ1AQ9NRL2 1556 aaPredicted RBP10.08□□□□□ -0.8
RNVU1-6-201ENST00000364688 BAZ1BQ9UIG0 1483 aaKnown RBP10.06□□□□□ -0.8
RNVU1-6-201ENST00000364688 WDR62O43379 1518 aa10.05□□□□□ -0.8
RNVU1-6-201ENST00000364688 MROH2BQ7Z745 1585 aa10□□□□□ -0.81
RNVU1-6-201ENST00000364688 PDS5BQ9NTI5 1447 aa9.98□□□□□ -0.81
RNVU1-6-201ENST00000364688 MRC2Q9UBG0 1479 aa9.98□□□□□ -0.81
RNVU1-6-201ENST00000364688 CADPSQ9ULU8 1353 aa9.94□□□□□ -0.82
RNVU1-6-201ENST00000364688 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
RNVU1-6-201ENST00000364688 CFTRP13569 1480 aa9.85□□□□□ -0.83
RNVU1-6-201ENST00000364688 WIZO95785 1651 aa9.85□□□□□ -0.83
RNVU1-6-201ENST00000364688 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
RNVU1-6-201ENST00000364688 URB2Q14146 1524 aaKnown RBP9.83□□□□□ -0.84
RNVU1-6-201ENST00000364688 FANCD2Q9BXW9 1451 aa9.83□□□□□ -0.84
RNVU1-6-201ENST00000364688 RIMBP3CA6NJZ7 1639 aa9.82□□□□□ -0.84
RNVU1-6-201ENST00000364688 RIMBP3BA6NNM3 1639 aa9.82□□□□□ -0.84
RNVU1-6-201ENST00000364688 RIMBP3Q9UFD9 1639 aa9.82□□□□□ -0.84
RNVU1-6-201ENST00000364688 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
RNVU1-6-201ENST00000364688 ARHGEF11O15085 1522 aa9.77□□□□□ -0.85
RNVU1-6-201ENST00000364688 TOP2AP11388 1531 aaKnown RBP9.73□□□□□ -0.85
RNVU1-6-201ENST00000364688 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
RNVU1-6-201ENST00000364688 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
RNVU1-6-201ENST00000364688 EIF4G3O43432 1585 aaKnown RBP9.69□□□□□ -0.86
RNVU1-6-201ENST00000364688 IFT140Q96RY7 1462 aa9.68□□□□□ -0.86
RNVU1-6-201ENST00000364688 RSF1Q96T23 1441 aaPredicted RBP9.68□□□□□ -0.86
RNVU1-6-201ENST00000364688 TARBP1Q13395 1621 aaKnown RBP9.67□□□□□ -0.86
RNVU1-6-201ENST00000364688 ARAP1Q96P48 1450 aa9.66□□□□□ -0.86
RNVU1-6-201ENST00000364688 TOPBP1Q92547 1522 aa9.65□□□□□ -0.86
RNVU1-6-201ENST00000364688 CHD1O14646 1710 aa9.65□□□□□ -0.87
RNVU1-6-201ENST00000364688 DNMBPQ6XZF7 1577 aa9.61□□□□□ -0.87
RNVU1-6-201ENST00000364688 CLASP1Q7Z460 1538 aa9.6□□□□□ -0.87
RNVU1-6-201ENST00000364688 CCDC88BA6NC98 1476 aa9.58□□□□□ -0.88
RNVU1-6-201ENST00000364688 ABCC8Q09428 1581 aa9.56□□□□□ -0.88
RNVU1-6-201ENST00000364688 POLA1P09884 1462 aaPredicted RBP9.55□□□□□ -0.88
RNVU1-6-201ENST00000364688 WDR97A6NE52 1622 aa9.55□□□□□ -0.88
RNVU1-6-201ENST00000364688 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.88
RNVU1-6-201ENST00000364688 CYB5RLQ6IPT4 315 aa9.49□□□□□ -0.89
RNVU1-6-201ENST00000364688 SNAPC4Q5SXM2 1469 aa9.46□□□□□ -0.9
RNVU1-6-201ENST00000364688 MAGI1Q96QZ7 1491 aaPredicted RBP9.46□□□□□ -0.9
RNVU1-6-201ENST00000364688 RAD54L2Q9Y4B4 1467 aa9.46□□□□□ -0.9
RNVU1-6-201ENST00000364688 SYNJ1O43426 1573 aa9.44□□□□□ -0.9
RNVU1-6-201ENST00000364688 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
RNVU1-6-201ENST00000364688 CUX1P39880 1505 aa9.41□□□□□ -0.9
RNVU1-6-201ENST00000364688 SYNJ2O15056 1496 aa9.41□□□□□ -0.9
RNVU1-6-201ENST00000364688 FGD5Q6ZNL6 1462 aa9.41□□□□□ -0.9
RNVU1-6-201ENST00000364688 PBRM1Q86U86 1689 aa9.4□□□□□ -0.9
RNVU1-6-201ENST00000364688 TDRD9Q8NDG6 1382 aaKnown RBP9.39□□□□□ -0.91
RNVU1-6-201ENST00000364688 GRIN2BQ13224 1484 aa9.39□□□□□ -0.91
RNVU1-6-201ENST00000364688 GAPVD1Q14C86 1478 aa9.39□□□□□ -0.91
RNVU1-6-201ENST00000364688 SHROOM2Q13796 1616 aa9.38□□□□□ -0.91
RNVU1-6-201ENST00000364688 ERCC6L2Q5T890 1561 aa9.38□□□□□ -0.91
RNVU1-6-201ENST00000364688 SOGA1O94964 1423 aa9.38□□□□□ -0.91
RNVU1-6-201ENST00000364688 KIF13AQ9H1H9 1805 aa9.37□□□□□ -0.91
RNVU1-6-201ENST00000364688 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
RNVU1-6-201ENST00000364688 NUP160Q12769 1436 aa9.34□□□□□ -0.91
RNVU1-6-201ENST00000364688 ABCA10Q8WWZ4 1543 aa9.34□□□□□ -0.91
RNVU1-6-201ENST00000364688 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
RNVU1-6-201ENST00000364688 CEP170Q5SW79 1584 aa9.33□□□□□ -0.92
RNVU1-6-201ENST00000364688 GRIN2AQ12879 1464 aa9.3□□□□□ -0.92
RNVU1-6-201ENST00000364688 FBLN2P98095 1184 aa9.28□□□□□ -0.92
RNVU1-6-201ENST00000364688 CHMP7Q8WUX9 453 aaPredicted RBP9.25□□□□□ -0.93
RNVU1-6-201ENST00000364688 BIVM-ERCC5R4GMW8 1640 aa9.24□□□□□ -0.93
RNVU1-6-201ENST00000364688 MAPKBP1O60336 1514 aa9.24□□□□□ -0.93
RNVU1-6-201ENST00000364688 DIP2BQ9P265 1576 aa9.23□□□□□ -0.93
RNVU1-6-201ENST00000364688 RUSC2Q8N2Y8 1516 aa9.22□□□□□ -0.93
RNVU1-6-201ENST00000364688 ABCC10Q5T3U5 1492 aa9.21□□□□□ -0.93
RNVU1-6-201ENST00000364688 ERICH3Q5RHP9 1530 aa9.21□□□□□ -0.93
RNVU1-6-201ENST00000364688 AEBP2Q6ZN18 517 aaPredicted RBP9.21□□□□□ -0.94
RNVU1-6-201ENST00000364688 TOP2BQ02880 1626 aa9.2□□□□□ -0.94
RNVU1-6-201ENST00000364688 FHAD1B1AJZ9 1412 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 1143.2 ms