RNA–Protein interactions for RNA: ENST00000364587.1

SNORA55-201, Transcript of small nucleolar RNA, H/ACA box 55, humanhuman

BASIC

Gene SNORA55, Length 135 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA55-201ENST00000364587 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
SNORA55-201ENST00000364587 ABCC9O60706 1549 aa21.94■■□□□ 1.1
SNORA55-201ENST00000364587 DNAJC5BQ9UF47 199 aa21.41■■□□□ 1.02
SNORA55-201ENST00000364587 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
SNORA55-201ENST00000364587 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
SNORA55-201ENST00000364587 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
SNORA55-201ENST00000364587 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
SNORA55-201ENST00000364587 NACADO15069 1562 aa20.11■□□□□ 0.81
SNORA55-201ENST00000364587 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
SNORA55-201ENST00000364587 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
SNORA55-201ENST00000364587 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
SNORA55-201ENST00000364587 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
SNORA55-201ENST00000364587 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
SNORA55-201ENST00000364587 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
SNORA55-201ENST00000364587 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
SNORA55-201ENST00000364587 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
SNORA55-201ENST00000364587 CUX2O14529 1486 aa19.25■□□□□ 0.67
SNORA55-201ENST00000364587 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
SNORA55-201ENST00000364587 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
SNORA55-201ENST00000364587 ERCC6Q03468 1493 aa19.02■□□□□ 0.63
SNORA55-201ENST00000364587 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
SNORA55-201ENST00000364587 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
SNORA55-201ENST00000364587 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
SNORA55-201ENST00000364587 NESP48681 1621 aa18.57■□□□□ 0.56
SNORA55-201ENST00000364587 THOC2Q8NI27 1593 aaKnown RBP18.49■□□□□ 0.55
SNORA55-201ENST00000364587 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
SNORA55-201ENST00000364587 SMARCA2P51531 1590 aa18.35■□□□□ 0.53
SNORA55-201ENST00000364587 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
SNORA55-201ENST00000364587 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
SNORA55-201ENST00000364587 LAMC3Q9Y6N6 1575 aa18.29■□□□□ 0.52
SNORA55-201ENST00000364587 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
SNORA55-201ENST00000364587 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
SNORA55-201ENST00000364587 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
SNORA55-201ENST00000364587 AEBP2Q6ZN18 517 aaPredicted RBP18.21■□□□□ 0.51
SNORA55-201ENST00000364587 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
SNORA55-201ENST00000364587 MRC2Q9UBG0 1479 aa18.12■□□□□ 0.49
SNORA55-201ENST00000364587 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
SNORA55-201ENST00000364587 WDR62O43379 1518 aa18.08■□□□□ 0.48
SNORA55-201ENST00000364587 TRHP20396 242 aaPredicted RBP18.07■□□□□ 0.48
SNORA55-201ENST00000364587 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
SNORA55-201ENST00000364587 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
SNORA55-201ENST00000364587 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
SNORA55-201ENST00000364587 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
SNORA55-201ENST00000364587 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
SNORA55-201ENST00000364587 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
SNORA55-201ENST00000364587 ARHGEF11O15085 1522 aa17.93■□□□□ 0.46
SNORA55-201ENST00000364587 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
SNORA55-201ENST00000364587 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
SNORA55-201ENST00000364587 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
SNORA55-201ENST00000364587 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
SNORA55-201ENST00000364587 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
SNORA55-201ENST00000364587 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
SNORA55-201ENST00000364587 CFTRP13569 1480 aa17.6■□□□□ 0.41
SNORA55-201ENST00000364587 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
SNORA55-201ENST00000364587 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
SNORA55-201ENST00000364587 ILDR1Q86SU0 546 aaPredicted RBP17.53■□□□□ 0.4
SNORA55-201ENST00000364587 FBLN2P98095 1184 aa17.52■□□□□ 0.4
SNORA55-201ENST00000364587 WIZO95785 1651 aa17.45■□□□□ 0.38
SNORA55-201ENST00000364587 CHD1O14646 1710 aa17.44■□□□□ 0.38
SNORA55-201ENST00000364587 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
SNORA55-201ENST00000364587 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.37
SNORA55-201ENST00000364587 TOPBP1Q92547 1522 aa17.34■□□□□ 0.37
SNORA55-201ENST00000364587 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
SNORA55-201ENST00000364587 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
SNORA55-201ENST00000364587 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
SNORA55-201ENST00000364587 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
SNORA55-201ENST00000364587 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
SNORA55-201ENST00000364587 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
SNORA55-201ENST00000364587 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
SNORA55-201ENST00000364587 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
SNORA55-201ENST00000364587 DNMBPQ6XZF7 1577 aa17.17■□□□□ 0.34
SNORA55-201ENST00000364587 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
SNORA55-201ENST00000364587 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
SNORA55-201ENST00000364587 KDM4FA0A1W2PPD8 638 aa17.13■□□□□ 0.33
SNORA55-201ENST00000364587 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
SNORA55-201ENST00000364587 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
SNORA55-201ENST00000364587 SOGA1O94964 1423 aa17.07■□□□□ 0.32
SNORA55-201ENST00000364587 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
SNORA55-201ENST00000364587 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
SNORA55-201ENST00000364587 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
SNORA55-201ENST00000364587 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
SNORA55-201ENST00000364587 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
SNORA55-201ENST00000364587 KIF13AQ9H1H9 1805 aa16.97■□□□□ 0.31
SNORA55-201ENST00000364587 FAM69CQ0P6D2 419 aa16.95■□□□□ 0.3
SNORA55-201ENST00000364587 ERCC6L2Q5T890 1561 aa16.92■□□□□ 0.3
SNORA55-201ENST00000364587 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
SNORA55-201ENST00000364587 ABCC10Q5T3U5 1492 aa16.84■□□□□ 0.29
SNORA55-201ENST00000364587 KDM6BO15054 1643 aa16.82■□□□□ 0.28
SNORA55-201ENST00000364587 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNORA55-201ENST00000364587 FBXO41Q8TF61 875 aa16.82■□□□□ 0.28
SNORA55-201ENST00000364587 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
SNORA55-201ENST00000364587 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
SNORA55-201ENST00000364587 GRIN2AQ12879 1464 aa16.75■□□□□ 0.27
SNORA55-201ENST00000364587 HECW2Q9P2P5 1572 aa16.74■□□□□ 0.27
SNORA55-201ENST00000364587 NUP160Q12769 1436 aa16.72■□□□□ 0.27
SNORA55-201ENST00000364587 ADGRL1O94910 1474 aa16.72■□□□□ 0.27
SNORA55-201ENST00000364587 DIP2BQ9P265 1576 aa16.71■□□□□ 0.27
SNORA55-201ENST00000364587 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
SNORA55-201ENST00000364587 CUX1P39880 1505 aa16.7■□□□□ 0.26
SNORA55-201ENST00000364587 MAPKBP1O60336 1514 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms