RNA–Protein interactions for RNA: ENST00000363919.1

RNU1-65P-201, Transcript of RNA, U1 small nuclear 65, pseudogene, humanhuman

BASIC

Gene RNU1-65P, Length 148 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-65P-201ENST00000363919 NISCHQ9Y2I1 1504 aa16.41■□□□□ 0.22
RNU1-65P-201ENST00000363919 ABCC9O60706 1549 aa15.33■□□□□ 0.04
RNU1-65P-201ENST00000363919 CCDC180Q9P1Z9 1646 aa14.83□□□□□ -0.04
RNU1-65P-201ENST00000363919 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
RNU1-65P-201ENST00000363919 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
RNU1-65P-201ENST00000363919 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
RNU1-65P-201ENST00000363919 NACADO15069 1562 aa14.14□□□□□ -0.15
RNU1-65P-201ENST00000363919 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
RNU1-65P-201ENST00000363919 UNC13AQ9UPW8 1703 aa13.97□□□□□ -0.17
RNU1-65P-201ENST00000363919 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.18
RNU1-65P-201ENST00000363919 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
RNU1-65P-201ENST00000363919 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
RNU1-65P-201ENST00000363919 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
RNU1-65P-201ENST00000363919 CC2D2AQ9P2K1 1620 aa13.77□□□□□ -0.21
RNU1-65P-201ENST00000363919 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
RNU1-65P-201ENST00000363919 EIF4G1Q04637 1599 aaKnown RBP13.65□□□□□ -0.22
RNU1-65P-201ENST00000363919 SCRIBQ14160 1630 aa13.57□□□□□ -0.24
RNU1-65P-201ENST00000363919 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
RNU1-65P-201ENST00000363919 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
RNU1-65P-201ENST00000363919 CUX2O14529 1486 aa13.31□□□□□ -0.28
RNU1-65P-201ENST00000363919 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
RNU1-65P-201ENST00000363919 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
RNU1-65P-201ENST00000363919 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
RNU1-65P-201ENST00000363919 NESP48681 1621 aa13.05□□□□□ -0.32
RNU1-65P-201ENST00000363919 ATAD2BQ9ULI0 1458 aa13□□□□□ -0.33
RNU1-65P-201ENST00000363919 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
RNU1-65P-201ENST00000363919 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
RNU1-65P-201ENST00000363919 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
RNU1-65P-201ENST00000363919 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
RNU1-65P-201ENST00000363919 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
RNU1-65P-201ENST00000363919 LAMC3Q9Y6N6 1575 aa12.83□□□□□ -0.36
RNU1-65P-201ENST00000363919 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
RNU1-65P-201ENST00000363919 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
RNU1-65P-201ENST00000363919 BAZ1AQ9NRL2 1556 aaPredicted RBP12.75□□□□□ -0.37
RNU1-65P-201ENST00000363919 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
RNU1-65P-201ENST00000363919 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
RNU1-65P-201ENST00000363919 CADPSQ9ULU8 1353 aa12.69□□□□□ -0.38
RNU1-65P-201ENST00000363919 WDR62O43379 1518 aa12.68□□□□□ -0.38
RNU1-65P-201ENST00000363919 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
RNU1-65P-201ENST00000363919 MROH2BQ7Z745 1585 aa12.66□□□□□ -0.38
RNU1-65P-201ENST00000363919 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
RNU1-65P-201ENST00000363919 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
RNU1-65P-201ENST00000363919 RIMBP3CA6NJZ7 1639 aa12.52□□□□□ -0.4
RNU1-65P-201ENST00000363919 RIMBP3BA6NNM3 1639 aa12.52□□□□□ -0.4
RNU1-65P-201ENST00000363919 RIMBP3Q9UFD9 1639 aa12.52□□□□□ -0.4
RNU1-65P-201ENST00000363919 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
RNU1-65P-201ENST00000363919 WIZO95785 1651 aa12.47□□□□□ -0.41
RNU1-65P-201ENST00000363919 ARHGEF11O15085 1522 aa12.46□□□□□ -0.42
RNU1-65P-201ENST00000363919 CFTRP13569 1480 aa12.45□□□□□ -0.42
RNU1-65P-201ENST00000363919 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
RNU1-65P-201ENST00000363919 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
RNU1-65P-201ENST00000363919 ZNF608Q9ULD9 1512 aaPredicted RBP12.4□□□□□ -0.42
RNU1-65P-201ENST00000363919 IFT140Q96RY7 1462 aa12.35□□□□□ -0.43
RNU1-65P-201ENST00000363919 AEBP2Q6ZN18 517 aaPredicted RBP12.35□□□□□ -0.43
RNU1-65P-201ENST00000363919 ARAP1Q96P48 1450 aa12.32□□□□□ -0.44
RNU1-65P-201ENST00000363919 TOP2AP11388 1531 aaKnown RBP12.28□□□□□ -0.44
RNU1-65P-201ENST00000363919 EIF4G3O43432 1585 aaKnown RBP12.27□□□□□ -0.44
RNU1-65P-201ENST00000363919 FBLN2P98095 1184 aa12.27□□□□□ -0.45
RNU1-65P-201ENST00000363919 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.45
RNU1-65P-201ENST00000363919 TOPBP1Q92547 1522 aa12.27□□□□□ -0.45
RNU1-65P-201ENST00000363919 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.45
RNU1-65P-201ENST00000363919 CHD1O14646 1710 aa12.23□□□□□ -0.45
RNU1-65P-201ENST00000363919 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
RNU1-65P-201ENST00000363919 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
RNU1-65P-201ENST00000363919 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
RNU1-65P-201ENST00000363919 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
RNU1-65P-201ENST00000363919 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
RNU1-65P-201ENST00000363919 TDRD9Q8NDG6 1382 aaKnown RBP12.12□□□□□ -0.47
RNU1-65P-201ENST00000363919 POLA1P09884 1462 aaPredicted RBP12.11□□□□□ -0.47
RNU1-65P-201ENST00000363919 RAD54L2Q9Y4B4 1467 aa12.1□□□□□ -0.47
RNU1-65P-201ENST00000363919 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
RNU1-65P-201ENST00000363919 SNAPC4Q5SXM2 1469 aa12.09□□□□□ -0.47
RNU1-65P-201ENST00000363919 CHMP7Q8WUX9 453 aaPredicted RBP12.09□□□□□ -0.47
RNU1-65P-201ENST00000363919 SOGA1O94964 1423 aa12.06□□□□□ -0.48
RNU1-65P-201ENST00000363919 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
RNU1-65P-201ENST00000363919 GAPVD1Q14C86 1478 aa12.03□□□□□ -0.48
RNU1-65P-201ENST00000363919 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.49
RNU1-65P-201ENST00000363919 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
RNU1-65P-201ENST00000363919 GRIN2BQ13224 1484 aa11.99□□□□□ -0.49
RNU1-65P-201ENST00000363919 FGD5Q6ZNL6 1462 aa11.99□□□□□ -0.49
RNU1-65P-201ENST00000363919 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
RNU1-65P-201ENST00000363919 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
RNU1-65P-201ENST00000363919 CUX1P39880 1505 aa11.91□□□□□ -0.5
RNU1-65P-201ENST00000363919 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
RNU1-65P-201ENST00000363919 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
RNU1-65P-201ENST00000363919 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
RNU1-65P-201ENST00000363919 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
RNU1-65P-201ENST00000363919 NUP160Q12769 1436 aa11.81□□□□□ -0.52
RNU1-65P-201ENST00000363919 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
RNU1-65P-201ENST00000363919 KIF13AQ9H1H9 1805 aa11.81□□□□□ -0.52
RNU1-65P-201ENST00000363919 ABCA10Q8WWZ4 1543 aa11.81□□□□□ -0.52
RNU1-65P-201ENST00000363919 KDM4FA0A1W2PPD8 638 aa11.8□□□□□ -0.52
RNU1-65P-201ENST00000363919 FAM69CQ0P6D2 419 aa11.8□□□□□ -0.52
RNU1-65P-201ENST00000363919 ADAMTS12P58397 1594 aa11.76□□□□□ -0.53
RNU1-65P-201ENST00000363919 SHROOM2Q13796 1616 aa11.76□□□□□ -0.53
RNU1-65P-201ENST00000363919 PRG4Q92954 1404 aaPredicted RBP11.75□□□□□ -0.53
RNU1-65P-201ENST00000363919 ABCC10Q5T3U5 1492 aa11.75□□□□□ -0.53
RNU1-65P-201ENST00000363919 FHAD1B1AJZ9 1412 aa11.73□□□□□ -0.53
RNU1-65P-201ENST00000363919 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
RNU1-65P-201ENST00000363919 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms