RNA–Protein interactions for RNA: ENST00000363849.1

RNA5SP260-201, Transcript of RNA, 5S ribosomal pseudogene 260, humanhuman

BASIC

Gene RNA5SP260, Length 111 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP260-201ENST00000363849 NISCHQ9Y2I1 1504 aa18.28■□□□□ 0.52
RNA5SP260-201ENST00000363849 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
RNA5SP260-201ENST00000363849 ABCC9O60706 1549 aa15.84■□□□□ 0.13
RNA5SP260-201ENST00000363849 RB1CC1Q8TDY2 1594 aa15.3■□□□□ 0.04
RNA5SP260-201ENST00000363849 NACADO15069 1562 aa15.29■□□□□ 0.04
RNA5SP260-201ENST00000363849 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
RNA5SP260-201ENST00000363849 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
RNA5SP260-201ENST00000363849 DCAF1Q9Y4B6 1507 aa15.16■□□□□ 0.02
RNA5SP260-201ENST00000363849 DCAF8L2P0C7V8 631 aa15.12■□□□□ 0.01
RNA5SP260-201ENST00000363849 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
RNA5SP260-201ENST00000363849 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
RNA5SP260-201ENST00000363849 SCRIBQ14160 1630 aa14.83□□□□□ -0.04
RNA5SP260-201ENST00000363849 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
RNA5SP260-201ENST00000363849 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
RNA5SP260-201ENST00000363849 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
RNA5SP260-201ENST00000363849 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
RNA5SP260-201ENST00000363849 CC2D2AQ9P2K1 1620 aa14.38□□□□□ -0.11
RNA5SP260-201ENST00000363849 CECR2Q9BXF3 1484 aa14.24□□□□□ -0.13
RNA5SP260-201ENST00000363849 SMARCA4P51532 1647 aa14.21□□□□□ -0.13
RNA5SP260-201ENST00000363849 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
RNA5SP260-201ENST00000363849 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
RNA5SP260-201ENST00000363849 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
RNA5SP260-201ENST00000363849 ATAD2BQ9ULI0 1458 aa14.08□□□□□ -0.16
RNA5SP260-201ENST00000363849 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.16
RNA5SP260-201ENST00000363849 NCAPD3P42695 1498 aa14.07□□□□□ -0.16
RNA5SP260-201ENST00000363849 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
RNA5SP260-201ENST00000363849 BAZ1BQ9UIG0 1483 aaKnown RBP13.97□□□□□ -0.17
RNA5SP260-201ENST00000363849 WIZO95785 1651 aa13.96□□□□□ -0.17
RNA5SP260-201ENST00000363849 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.19
RNA5SP260-201ENST00000363849 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
RNA5SP260-201ENST00000363849 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
RNA5SP260-201ENST00000363849 NESP48681 1621 aa13.72□□□□□ -0.21
RNA5SP260-201ENST00000363849 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
RNA5SP260-201ENST00000363849 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
RNA5SP260-201ENST00000363849 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
RNA5SP260-201ENST00000363849 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
RNA5SP260-201ENST00000363849 CCDC88BA6NC98 1476 aa13.6□□□□□ -0.23
RNA5SP260-201ENST00000363849 CFTRP13569 1480 aa13.59□□□□□ -0.23
RNA5SP260-201ENST00000363849 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.23
RNA5SP260-201ENST00000363849 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
RNA5SP260-201ENST00000363849 CUX2O14529 1486 aa13.54□□□□□ -0.24
RNA5SP260-201ENST00000363849 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
RNA5SP260-201ENST00000363849 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
RNA5SP260-201ENST00000363849 MRC2Q9UBG0 1479 aa13.47□□□□□ -0.25
RNA5SP260-201ENST00000363849 WDR62O43379 1518 aa13.46□□□□□ -0.25
RNA5SP260-201ENST00000363849 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.25
RNA5SP260-201ENST00000363849 URB2Q14146 1524 aaKnown RBP13.38□□□□□ -0.27
RNA5SP260-201ENST00000363849 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
RNA5SP260-201ENST00000363849 TOPBP1Q92547 1522 aa13.3□□□□□ -0.28
RNA5SP260-201ENST00000363849 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
RNA5SP260-201ENST00000363849 CUX1P39880 1505 aa13.21□□□□□ -0.29
RNA5SP260-201ENST00000363849 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
RNA5SP260-201ENST00000363849 TARBP1Q13395 1621 aaKnown RBP13.2□□□□□ -0.3
RNA5SP260-201ENST00000363849 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
RNA5SP260-201ENST00000363849 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
RNA5SP260-201ENST00000363849 FGD5Q6ZNL6 1462 aa13.15□□□□□ -0.3
RNA5SP260-201ENST00000363849 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
RNA5SP260-201ENST00000363849 WDR97A6NE52 1622 aa13.14□□□□□ -0.31
RNA5SP260-201ENST00000363849 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
RNA5SP260-201ENST00000363849 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
RNA5SP260-201ENST00000363849 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
RNA5SP260-201ENST00000363849 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
RNA5SP260-201ENST00000363849 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.31
RNA5SP260-201ENST00000363849 SOGA1O94964 1423 aa13.09□□□□□ -0.31
RNA5SP260-201ENST00000363849 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.32
RNA5SP260-201ENST00000363849 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
RNA5SP260-201ENST00000363849 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
RNA5SP260-201ENST00000363849 PBRM1Q86U86 1689 aa13.03□□□□□ -0.32
RNA5SP260-201ENST00000363849 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.32
RNA5SP260-201ENST00000363849 CHD1O14646 1710 aa13□□□□□ -0.33
RNA5SP260-201ENST00000363849 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
RNA5SP260-201ENST00000363849 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
RNA5SP260-201ENST00000363849 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
RNA5SP260-201ENST00000363849 SNAPC4Q5SXM2 1469 aa12.95□□□□□ -0.34
RNA5SP260-201ENST00000363849 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
RNA5SP260-201ENST00000363849 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
RNA5SP260-201ENST00000363849 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
RNA5SP260-201ENST00000363849 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
RNA5SP260-201ENST00000363849 ADAMTS12P58397 1594 aa12.89□□□□□ -0.35
RNA5SP260-201ENST00000363849 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.35
RNA5SP260-201ENST00000363849 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
RNA5SP260-201ENST00000363849 FBLN2P98095 1184 aa12.82□□□□□ -0.36
RNA5SP260-201ENST00000363849 FHAD1B1AJZ9 1412 aa12.81□□□□□ -0.36
RNA5SP260-201ENST00000363849 CUL7Q14999 1698 aa12.81□□□□□ -0.36
RNA5SP260-201ENST00000363849 GRIN2AQ12879 1464 aa12.81□□□□□ -0.36
RNA5SP260-201ENST00000363849 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
RNA5SP260-201ENST00000363849 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
RNA5SP260-201ENST00000363849 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
RNA5SP260-201ENST00000363849 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
RNA5SP260-201ENST00000363849 ARHGEF11O15085 1522 aa12.77□□□□□ -0.37
RNA5SP260-201ENST00000363849 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
RNA5SP260-201ENST00000363849 NUP160Q12769 1436 aa12.76□□□□□ -0.37
RNA5SP260-201ENST00000363849 IGF1RP08069 1367 aa12.75□□□□□ -0.37
RNA5SP260-201ENST00000363849 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
RNA5SP260-201ENST00000363849 SHROOM2Q13796 1616 aa12.71□□□□□ -0.37
RNA5SP260-201ENST00000363849 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.38
RNA5SP260-201ENST00000363849 CARMIL1Q5VZK9 1371 aa12.67□□□□□ -0.38
RNA5SP260-201ENST00000363849 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
RNA5SP260-201ENST00000363849 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
RNA5SP260-201ENST00000363849 RAPGEF2Q9Y4G8 1499 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 261.3 ms