RNA–Protein interactions for RNA: ENST00000363613.1

RNU6-1017P-201, Transcript of RNA, U6 small nuclear 1017, pseudogene, humanhuman

BASIC

Gene RNU6-1017P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1017P-201ENST00000363613 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
RNU6-1017P-201ENST00000363613 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.14
RNU6-1017P-201ENST00000363613 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
RNU6-1017P-201ENST00000363613 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
RNU6-1017P-201ENST00000363613 ABCC9O60706 1549 aa13.42□□□□□ -0.26
RNU6-1017P-201ENST00000363613 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
RNU6-1017P-201ENST00000363613 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
RNU6-1017P-201ENST00000363613 NACADO15069 1562 aa13.25□□□□□ -0.29
RNU6-1017P-201ENST00000363613 RB1CC1Q8TDY2 1594 aa13.17□□□□□ -0.3
RNU6-1017P-201ENST00000363613 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
RNU6-1017P-201ENST00000363613 SCRIBQ14160 1630 aa12.89□□□□□ -0.35
RNU6-1017P-201ENST00000363613 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
RNU6-1017P-201ENST00000363613 PABPN1Q86U42 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
RNU6-1017P-201ENST00000363613 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
RNU6-1017P-201ENST00000363613 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
RNU6-1017P-201ENST00000363613 SUPT5HO00267 1087 aaKnown RBP12.49□□□□□ -0.41
RNU6-1017P-201ENST00000363613 CECR2Q9BXF3 1484 aa12.41□□□□□ -0.42
RNU6-1017P-201ENST00000363613 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
RNU6-1017P-201ENST00000363613 SMARCA4P51532 1647 aa12.38□□□□□ -0.43
RNU6-1017P-201ENST00000363613 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
RNU6-1017P-201ENST00000363613 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
RNU6-1017P-201ENST00000363613 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
RNU6-1017P-201ENST00000363613 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
RNU6-1017P-201ENST00000363613 WIZO95785 1651 aa12.24□□□□□ -0.45
RNU6-1017P-201ENST00000363613 ATAD2BQ9ULI0 1458 aa12.23□□□□□ -0.45
RNU6-1017P-201ENST00000363613 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
RNU6-1017P-201ENST00000363613 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
RNU6-1017P-201ENST00000363613 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
RNU6-1017P-201ENST00000363613 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
RNU6-1017P-201ENST00000363613 CC2D2AQ9P2K1 1620 aa12.15□□□□□ -0.46
RNU6-1017P-201ENST00000363613 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
RNU6-1017P-201ENST00000363613 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
RNU6-1017P-201ENST00000363613 DNAJC5BQ9UF47 199 aa11.88□□□□□ -0.51
RNU6-1017P-201ENST00000363613 CHIC1Q5VXU3 224 aa11.86□□□□□ -0.51
RNU6-1017P-201ENST00000363613 CFTRP13569 1480 aa11.85□□□□□ -0.51
RNU6-1017P-201ENST00000363613 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
RNU6-1017P-201ENST00000363613 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
RNU6-1017P-201ENST00000363613 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
RNU6-1017P-201ENST00000363613 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
RNU6-1017P-201ENST00000363613 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
RNU6-1017P-201ENST00000363613 ABCC8Q09428 1581 aa11.72□□□□□ -0.53
RNU6-1017P-201ENST00000363613 FANCD2Q9BXW9 1451 aa11.72□□□□□ -0.53
RNU6-1017P-201ENST00000363613 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
RNU6-1017P-201ENST00000363613 NESP48681 1621 aa11.68□□□□□ -0.54
RNU6-1017P-201ENST00000363613 ERCC6Q03468 1493 aa11.64□□□□□ -0.55
RNU6-1017P-201ENST00000363613 TOP2BQ02880 1626 aa11.63□□□□□ -0.55
RNU6-1017P-201ENST00000363613 BIVM-ERCC5R4GMW8 1640 aa11.61□□□□□ -0.55
RNU6-1017P-201ENST00000363613 EEA1Q15075 1411 aa11.6□□□□□ -0.55
RNU6-1017P-201ENST00000363613 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
RNU6-1017P-201ENST00000363613 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
RNU6-1017P-201ENST00000363613 SYNJ1O43426 1573 aa11.58□□□□□ -0.56
RNU6-1017P-201ENST00000363613 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
RNU6-1017P-201ENST00000363613 CUX1P39880 1505 aa11.56□□□□□ -0.56
RNU6-1017P-201ENST00000363613 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
RNU6-1017P-201ENST00000363613 SOGA1O94964 1423 aa11.52□□□□□ -0.57
RNU6-1017P-201ENST00000363613 KIF27Q86VH2 1401 aa11.52□□□□□ -0.57
RNU6-1017P-201ENST00000363613 URB2Q14146 1524 aaKnown RBP11.51□□□□□ -0.57
RNU6-1017P-201ENST00000363613 FAM9AQ8IZU1 332 aaPredicted RBP11.51□□□□□ -0.57
RNU6-1017P-201ENST00000363613 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
RNU6-1017P-201ENST00000363613 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
RNU6-1017P-201ENST00000363613 WDR62O43379 1518 aa11.47□□□□□ -0.57
RNU6-1017P-201ENST00000363613 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
RNU6-1017P-201ENST00000363613 IFT140Q96RY7 1462 aa11.45□□□□□ -0.58
RNU6-1017P-201ENST00000363613 ABCA10Q8WWZ4 1543 aa11.45□□□□□ -0.58
RNU6-1017P-201ENST00000363613 CUX2O14529 1486 aa11.44□□□□□ -0.58
RNU6-1017P-201ENST00000363613 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
RNU6-1017P-201ENST00000363613 WDR97A6NE52 1622 aa11.41□□□□□ -0.58
RNU6-1017P-201ENST00000363613 RAD54L2Q9Y4B4 1467 aa11.39□□□□□ -0.59
RNU6-1017P-201ENST00000363613 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
RNU6-1017P-201ENST00000363613 GAPVD1Q14C86 1478 aa11.37□□□□□ -0.59
RNU6-1017P-201ENST00000363613 TARBP1Q13395 1621 aaKnown RBP11.36□□□□□ -0.59
RNU6-1017P-201ENST00000363613 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
RNU6-1017P-201ENST00000363613 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
RNU6-1017P-201ENST00000363613 IGF1RP08069 1367 aa11.35□□□□□ -0.59
RNU6-1017P-201ENST00000363613 CARMIL1Q5VZK9 1371 aa11.35□□□□□ -0.59
RNU6-1017P-201ENST00000363613 TDRD9Q8NDG6 1382 aaKnown RBP11.35□□□□□ -0.59
RNU6-1017P-201ENST00000363613 GOLGA3Q08378 1498 aa11.35□□□□□ -0.59
RNU6-1017P-201ENST00000363613 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
RNU6-1017P-201ENST00000363613 KIF21BO75037 1637 aa11.33□□□□□ -0.6
RNU6-1017P-201ENST00000363613 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
RNU6-1017P-201ENST00000363613 CUL7Q14999 1698 aa11.32□□□□□ -0.6
RNU6-1017P-201ENST00000363613 RAPGEF2Q9Y4G8 1499 aa11.31□□□□□ -0.6
RNU6-1017P-201ENST00000363613 TNIKQ9UKE5 1360 aa11.3□□□□□ -0.6
RNU6-1017P-201ENST00000363613 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
RNU6-1017P-201ENST00000363613 PRXQ9BXM0 1461 aa11.3□□□□□ -0.6
RNU6-1017P-201ENST00000363613 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
RNU6-1017P-201ENST00000363613 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.6
RNU6-1017P-201ENST00000363613 FHAD1B1AJZ9 1412 aa11.27□□□□□ -0.6
RNU6-1017P-201ENST00000363613 CHMP7Q8WUX9 453 aaPredicted RBP11.26□□□□□ -0.61
RNU6-1017P-201ENST00000363613 PBRM1Q86U86 1689 aa11.26□□□□□ -0.61
RNU6-1017P-201ENST00000363613 MAGI1Q96QZ7 1491 aaPredicted RBP11.25□□□□□ -0.61
RNU6-1017P-201ENST00000363613 ZNF608Q9ULD9 1512 aaPredicted RBP11.24□□□□□ -0.61
RNU6-1017P-201ENST00000363613 EIF4G3O43432 1585 aaKnown RBP11.23□□□□□ -0.61
RNU6-1017P-201ENST00000363613 FBLN2P98095 1184 aa11.2□□□□□ -0.62
RNU6-1017P-201ENST00000363613 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
RNU6-1017P-201ENST00000363613 SYNJ2O15056 1496 aa11.18□□□□□ -0.62
RNU6-1017P-201ENST00000363613 ADAMTS12P58397 1594 aa11.17□□□□□ -0.62
RNU6-1017P-201ENST00000363613 CEP162Q5TB80 1403 aa11.17□□□□□ -0.62
RNU6-1017P-201ENST00000363613 CLIP1P30622 1438 aa11.16□□□□□ -0.62
RNU6-1017P-201ENST00000363613 CTTNBP2Q8WZ74 1663 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms