RNA–Protein interactions for RNA: ENST00000363468.1

RNU1-49P-201, Transcript of RNA, U1 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU1-49P, Length 159 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-49P-201ENST00000363468 NISCHQ9Y2I1 1504 aa14.74□□□□□ -0.05
RNU1-49P-201ENST00000363468 CCDC180Q9P1Z9 1646 aa13.02□□□□□ -0.33
RNU1-49P-201ENST00000363468 ABCC9O60706 1549 aa12.49□□□□□ -0.41
RNU1-49P-201ENST00000363468 ZCCHC6Q5VYS8 1495 aaKnown RBP12.33□□□□□ -0.44
RNU1-49P-201ENST00000363468 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.45
RNU1-49P-201ENST00000363468 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.45
RNU1-49P-201ENST00000363468 MYO15BQ96JP2 1530 aa12.18□□□□□ -0.46
RNU1-49P-201ENST00000363468 NACADO15069 1562 aa12.17□□□□□ -0.46
RNU1-49P-201ENST00000363468 RB1CC1Q8TDY2 1594 aa12.13□□□□□ -0.47
RNU1-49P-201ENST00000363468 UNC13AQ9UPW8 1703 aa11.89□□□□□ -0.51
RNU1-49P-201ENST00000363468 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
RNU1-49P-201ENST00000363468 SHROOM4Q9ULL8 1493 aa11.77□□□□□ -0.52
RNU1-49P-201ENST00000363468 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
RNU1-49P-201ENST00000363468 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
RNU1-49P-201ENST00000363468 CECR2Q9BXF3 1484 aa11.46□□□□□ -0.57
RNU1-49P-201ENST00000363468 EIF4G1Q04637 1599 aaKnown RBP11.42□□□□□ -0.58
RNU1-49P-201ENST00000363468 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
RNU1-49P-201ENST00000363468 SMARCA4P51532 1647 aa11.39□□□□□ -0.59
RNU1-49P-201ENST00000363468 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
RNU1-49P-201ENST00000363468 CC2D2AQ9P2K1 1620 aa11.33□□□□□ -0.6
RNU1-49P-201ENST00000363468 RSF1Q96T23 1441 aaPredicted RBP11.32□□□□□ -0.6
RNU1-49P-201ENST00000363468 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
RNU1-49P-201ENST00000363468 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.61
RNU1-49P-201ENST00000363468 WIZO95785 1651 aa11.27□□□□□ -0.61
RNU1-49P-201ENST00000363468 ATAD2BQ9ULI0 1458 aa11.26□□□□□ -0.61
RNU1-49P-201ENST00000363468 SMARCA2P51531 1590 aa11.26□□□□□ -0.61
RNU1-49P-201ENST00000363468 NCAPD3P42695 1498 aa11.23□□□□□ -0.61
RNU1-49P-201ENST00000363468 SUPT5HO00267 1087 aaKnown RBP11.21□□□□□ -0.61
RNU1-49P-201ENST00000363468 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
RNU1-49P-201ENST00000363468 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
RNU1-49P-201ENST00000363468 TOP2AP11388 1531 aaKnown RBP11.14□□□□□ -0.63
RNU1-49P-201ENST00000363468 CCDC88BA6NC98 1476 aa11.02□□□□□ -0.65
RNU1-49P-201ENST00000363468 CADPSQ9ULU8 1353 aa10.9□□□□□ -0.66
RNU1-49P-201ENST00000363468 LAMC3Q9Y6N6 1575 aa10.9□□□□□ -0.67
RNU1-49P-201ENST00000363468 CFTRP13569 1480 aa10.89□□□□□ -0.67
RNU1-49P-201ENST00000363468 NESP48681 1621 aa10.88□□□□□ -0.67
RNU1-49P-201ENST00000363468 PRDM2Q13029 1718 aa10.87□□□□□ -0.67
RNU1-49P-201ENST00000363468 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
RNU1-49P-201ENST00000363468 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
RNU1-49P-201ENST00000363468 FANCD2Q9BXW9 1451 aa10.78□□□□□ -0.68
RNU1-49P-201ENST00000363468 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
RNU1-49P-201ENST00000363468 ERCC6Q03468 1493 aa10.74□□□□□ -0.69
RNU1-49P-201ENST00000363468 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
RNU1-49P-201ENST00000363468 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
RNU1-49P-201ENST00000363468 THOC2Q8NI27 1593 aaKnown RBP10.67□□□□□ -0.7
RNU1-49P-201ENST00000363468 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
RNU1-49P-201ENST00000363468 WRNQ14191 1432 aaPredicted RBP eCLIP10.67□□□□□ -0.7
RNU1-49P-201ENST00000363468 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.7
RNU1-49P-201ENST00000363468 CUX1P39880 1505 aa10.65□□□□□ -0.7
RNU1-49P-201ENST00000363468 WDR62O43379 1518 aa10.64□□□□□ -0.71
RNU1-49P-201ENST00000363468 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
RNU1-49P-201ENST00000363468 TOPBP1Q92547 1522 aa10.63□□□□□ -0.71
RNU1-49P-201ENST00000363468 TOP2BQ02880 1626 aa10.62□□□□□ -0.71
RNU1-49P-201ENST00000363468 BIVM-ERCC5R4GMW8 1640 aa10.62□□□□□ -0.71
RNU1-49P-201ENST00000363468 CHIC1Q5VXU3 224 aa10.61□□□□□ -0.71
RNU1-49P-201ENST00000363468 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
RNU1-49P-201ENST00000363468 FGD5Q6ZNL6 1462 aa10.57□□□□□ -0.72
RNU1-49P-201ENST00000363468 POLA1P09884 1462 aaPredicted RBP10.56□□□□□ -0.72
RNU1-49P-201ENST00000363468 CUX2O14529 1486 aa10.55□□□□□ -0.72
RNU1-49P-201ENST00000363468 SOGA1O94964 1423 aa10.52□□□□□ -0.73
RNU1-49P-201ENST00000363468 RAD54L2Q9Y4B4 1467 aa10.52□□□□□ -0.73
RNU1-49P-201ENST00000363468 TARBP1Q13395 1621 aaKnown RBP10.51□□□□□ -0.73
RNU1-49P-201ENST00000363468 IFT140Q96RY7 1462 aa10.51□□□□□ -0.73
RNU1-49P-201ENST00000363468 WDR97A6NE52 1622 aa10.49□□□□□ -0.73
RNU1-49P-201ENST00000363468 ABCA10Q8WWZ4 1543 aa10.48□□□□□ -0.73
RNU1-49P-201ENST00000363468 ZNF608Q9ULD9 1512 aaPredicted RBP10.44□□□□□ -0.74
RNU1-49P-201ENST00000363468 TDRD9Q8NDG6 1382 aaKnown RBP10.43□□□□□ -0.74
RNU1-49P-201ENST00000363468 ABCA5Q8WWZ7 1642 aa10.43□□□□□ -0.74
RNU1-49P-201ENST00000363468 AQRO60306 1485 aaKnown RBP eCLIP10.42□□□□□ -0.74
RNU1-49P-201ENST00000363468 EIF4G3O43432 1585 aaKnown RBP10.42□□□□□ -0.74
RNU1-49P-201ENST00000363468 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
RNU1-49P-201ENST00000363468 RUSC2Q8N2Y8 1516 aa10.41□□□□□ -0.74
RNU1-49P-201ENST00000363468 GAPVD1Q14C86 1478 aa10.41□□□□□ -0.74
RNU1-49P-201ENST00000363468 PBRM1Q86U86 1689 aa10.39□□□□□ -0.75
RNU1-49P-201ENST00000363468 EEA1Q15075 1411 aa10.38□□□□□ -0.75
RNU1-49P-201ENST00000363468 ERICH3Q5RHP9 1530 aa10.37□□□□□ -0.75
RNU1-49P-201ENST00000363468 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
RNU1-49P-201ENST00000363468 IGF1RP08069 1367 aa10.36□□□□□ -0.75
RNU1-49P-201ENST00000363468 FAM9AQ8IZU1 332 aaPredicted RBP10.35□□□□□ -0.75
RNU1-49P-201ENST00000363468 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
RNU1-49P-201ENST00000363468 CUL7Q14999 1698 aa10.32□□□□□ -0.76
RNU1-49P-201ENST00000363468 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
RNU1-49P-201ENST00000363468 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
RNU1-49P-201ENST00000363468 ADAMTS12P58397 1594 aa10.31□□□□□ -0.76
RNU1-49P-201ENST00000363468 CARMIL1Q5VZK9 1371 aa10.29□□□□□ -0.76
RNU1-49P-201ENST00000363468 FHAD1B1AJZ9 1412 aa10.29□□□□□ -0.76
RNU1-49P-201ENST00000363468 PRXQ9BXM0 1461 aa10.29□□□□□ -0.76
RNU1-49P-201ENST00000363468 SYNJ2O15056 1496 aa10.28□□□□□ -0.76
RNU1-49P-201ENST00000363468 KIF21BO75037 1637 aa10.26□□□□□ -0.77
RNU1-49P-201ENST00000363468 RAPGEF2Q9Y4G8 1499 aa10.26□□□□□ -0.77
RNU1-49P-201ENST00000363468 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
RNU1-49P-201ENST00000363468 CHD1O14646 1710 aa10.26□□□□□ -0.77
RNU1-49P-201ENST00000363468 FBLN2P98095 1184 aa10.24□□□□□ -0.77
RNU1-49P-201ENST00000363468 GRIN2AQ12879 1464 aa10.23□□□□□ -0.77
RNU1-49P-201ENST00000363468 GOLGA3Q08378 1498 aa10.21□□□□□ -0.78
RNU1-49P-201ENST00000363468 EHMT2Q96KQ7 1210 aa10.19□□□□□ -0.78
RNU1-49P-201ENST00000363468 CEP170Q5SW79 1584 aa10.18□□□□□ -0.78
RNU1-49P-201ENST00000363468 NUP160Q12769 1436 aa10.18□□□□□ -0.78
RNU1-49P-201ENST00000363468 LOC105371045A0A1W2PR82 267 aa10.18□□□□□ -0.78
RNU1-49P-201ENST00000363468 CTTNBP2Q8WZ74 1663 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms