RNA–Protein interactions for RNA: ENST00000362966.1

RNU1-47P-201, Transcript of RNA, U1 small nuclear 47, pseudogene, humanhuman

BASIC

Gene RNU1-47P, Length 163 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-47P-201ENST00000362966 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.93
RNU1-47P-201ENST00000362966 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
RNU1-47P-201ENST00000362966 ABCC9O60706 1549 aa18.55■□□□□ 0.56
RNU1-47P-201ENST00000362966 RB1CC1Q8TDY2 1594 aa17.78■□□□□ 0.44
RNU1-47P-201ENST00000362966 NACADO15069 1562 aa17.7■□□□□ 0.42
RNU1-47P-201ENST00000362966 MYO15BQ96JP2 1530 aa17.59■□□□□ 0.41
RNU1-47P-201ENST00000362966 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
RNU1-47P-201ENST00000362966 DCAF1Q9Y4B6 1507 aa17.33■□□□□ 0.37
RNU1-47P-201ENST00000362966 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
RNU1-47P-201ENST00000362966 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
RNU1-47P-201ENST00000362966 ZCCHC6Q5VYS8 1495 aaKnown RBP17.29■□□□□ 0.36
RNU1-47P-201ENST00000362966 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
RNU1-47P-201ENST00000362966 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
RNU1-47P-201ENST00000362966 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
RNU1-47P-201ENST00000362966 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
RNU1-47P-201ENST00000362966 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
RNU1-47P-201ENST00000362966 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
RNU1-47P-201ENST00000362966 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
RNU1-47P-201ENST00000362966 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
RNU1-47P-201ENST00000362966 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
RNU1-47P-201ENST00000362966 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
RNU1-47P-201ENST00000362966 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
RNU1-47P-201ENST00000362966 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
RNU1-47P-201ENST00000362966 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
RNU1-47P-201ENST00000362966 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
RNU1-47P-201ENST00000362966 CUX2O14529 1486 aa16.12■□□□□ 0.17
RNU1-47P-201ENST00000362966 BAZ1BQ9UIG0 1483 aaKnown RBP16.06■□□□□ 0.16
RNU1-47P-201ENST00000362966 DNAJC5Q9H3Z4 198 aa16.06■□□□□ 0.16
RNU1-47P-201ENST00000362966 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
RNU1-47P-201ENST00000362966 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
RNU1-47P-201ENST00000362966 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
RNU1-47P-201ENST00000362966 NESP48681 1621 aa15.95■□□□□ 0.14
RNU1-47P-201ENST00000362966 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
RNU1-47P-201ENST00000362966 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
RNU1-47P-201ENST00000362966 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
RNU1-47P-201ENST00000362966 WIZO95785 1651 aa15.76■□□□□ 0.11
RNU1-47P-201ENST00000362966 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
RNU1-47P-201ENST00000362966 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
RNU1-47P-201ENST00000362966 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
RNU1-47P-201ENST00000362966 WDR62O43379 1518 aa15.68■□□□□ 0.1
RNU1-47P-201ENST00000362966 CFTRP13569 1480 aa15.67■□□□□ 0.1
RNU1-47P-201ENST00000362966 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
RNU1-47P-201ENST00000362966 CEP164Q9UPV0 1460 aa15.61■□□□□ 0.09
RNU1-47P-201ENST00000362966 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
RNU1-47P-201ENST00000362966 URB2Q14146 1524 aaKnown RBP15.48■□□□□ 0.07
RNU1-47P-201ENST00000362966 PRDM2Q13029 1718 aa15.47■□□□□ 0.07
RNU1-47P-201ENST00000362966 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
RNU1-47P-201ENST00000362966 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
RNU1-47P-201ENST00000362966 IFT140Q96RY7 1462 aa15.33■□□□□ 0.05
RNU1-47P-201ENST00000362966 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
RNU1-47P-201ENST00000362966 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
RNU1-47P-201ENST00000362966 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
RNU1-47P-201ENST00000362966 ZNF608Q9ULD9 1512 aaPredicted RBP15.25■□□□□ 0.03
RNU1-47P-201ENST00000362966 TARBP1Q13395 1621 aaKnown RBP15.21■□□□□ 0.02
RNU1-47P-201ENST00000362966 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
RNU1-47P-201ENST00000362966 POLA1P09884 1462 aaPredicted RBP15.16■□□□□ 0.02
RNU1-47P-201ENST00000362966 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
RNU1-47P-201ENST00000362966 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
RNU1-47P-201ENST00000362966 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.01
RNU1-47P-201ENST00000362966 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
RNU1-47P-201ENST00000362966 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
RNU1-47P-201ENST00000362966 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
RNU1-47P-201ENST00000362966 ARHGEF11O15085 1522 aa15.08■□□□□ 0.01
RNU1-47P-201ENST00000362966 SOGA1O94964 1423 aa15.06■□□□□ 0
RNU1-47P-201ENST00000362966 CUX1P39880 1505 aa15.05■□□□□ -0
RNU1-47P-201ENST00000362966 FGD5Q6ZNL6 1462 aa15.03■□□□□ -0
RNU1-47P-201ENST00000362966 RAD54L2Q9Y4B4 1467 aa15.03■□□□□ -0
RNU1-47P-201ENST00000362966 CHD1O14646 1710 aa15.03■□□□□ -0
RNU1-47P-201ENST00000362966 MAGI1Q96QZ7 1491 aaPredicted RBP15□□□□□ -0.01
RNU1-47P-201ENST00000362966 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
RNU1-47P-201ENST00000362966 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
RNU1-47P-201ENST00000362966 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
RNU1-47P-201ENST00000362966 CLASP1Q7Z460 1538 aa14.95□□□□□ -0.02
RNU1-47P-201ENST00000362966 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
RNU1-47P-201ENST00000362966 SYNJ2O15056 1496 aa14.93□□□□□ -0.02
RNU1-47P-201ENST00000362966 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
RNU1-47P-201ENST00000362966 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
RNU1-47P-201ENST00000362966 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
RNU1-47P-201ENST00000362966 ABCA5Q8WWZ7 1642 aa14.89□□□□□ -0.03
RNU1-47P-201ENST00000362966 FBLN2P98095 1184 aa14.88□□□□□ -0.03
RNU1-47P-201ENST00000362966 CYB5RLQ6IPT4 315 aa14.87□□□□□ -0.03
RNU1-47P-201ENST00000362966 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
RNU1-47P-201ENST00000362966 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
RNU1-47P-201ENST00000362966 PBRM1Q86U86 1689 aa14.85□□□□□ -0.03
RNU1-47P-201ENST00000362966 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
RNU1-47P-201ENST00000362966 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
RNU1-47P-201ENST00000362966 SUPT5HO00267 1087 aaKnown RBP14.81□□□□□ -0.04
RNU1-47P-201ENST00000362966 GRIN2AQ12879 1464 aa14.77□□□□□ -0.04
RNU1-47P-201ENST00000362966 NUP160Q12769 1436 aa14.77□□□□□ -0.04
RNU1-47P-201ENST00000362966 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
RNU1-47P-201ENST00000362966 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
RNU1-47P-201ENST00000362966 FHAD1B1AJZ9 1412 aa14.74□□□□□ -0.05
RNU1-47P-201ENST00000362966 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
RNU1-47P-201ENST00000362966 CEP170Q5SW79 1584 aa14.69□□□□□ -0.06
RNU1-47P-201ENST00000362966 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
RNU1-47P-201ENST00000362966 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
RNU1-47P-201ENST00000362966 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
RNU1-47P-201ENST00000362966 JPH4Q96JJ6 628 aa14.54□□□□□ -0.08
RNU1-47P-201ENST00000362966 PRG4Q92954 1404 aaPredicted RBP14.54□□□□□ -0.08
RNU1-47P-201ENST00000362966 IGF1RP08069 1367 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms