RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 NISCHQ9Y2I1 1504 aa8.59□□□□□ -1.03
RNU4-35P-201ENST00000362588 CCDC180Q9P1Z9 1646 aa7.67□□□□□ -1.18
RNU4-35P-201ENST00000362588 ABCC9O60706 1549 aa7.56□□□□□ -1.2
RNU4-35P-201ENST00000362588 RB1CC1Q8TDY2 1594 aa7.22□□□□□ -1.25
RNU4-35P-201ENST00000362588 DCAF8L2P0C7V8 631 aa7.19□□□□□ -1.26
RNU4-35P-201ENST00000362588 NACADO15069 1562 aa7.18□□□□□ -1.26
RNU4-35P-201ENST00000362588 UNC13AQ9UPW8 1703 aa7.16□□□□□ -1.26
RNU4-35P-201ENST00000362588 ZCCHC6Q5VYS8 1495 aaKnown RBP7.16□□□□□ -1.26
RNU4-35P-201ENST00000362588 MYO15BQ96JP2 1530 aa7.08□□□□□ -1.28
RNU4-35P-201ENST00000362588 DCAF1Q9Y4B6 1507 aa7.06□□□□□ -1.28
RNU4-35P-201ENST00000362588 SCRIBQ14160 1630 aa7.05□□□□□ -1.28
RNU4-35P-201ENST00000362588 BICRAQ9NZM4 1560 aa7.04□□□□□ -1.28
RNU4-35P-201ENST00000362588 PABPN1Q86U42 306 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU4-35P-201ENST00000362588 DNAJC5BQ9UF47 199 aa6.95□□□□□ -1.3
RNU4-35P-201ENST00000362588 SHROOM4Q9ULL8 1493 aa6.86□□□□□ -1.31
RNU4-35P-201ENST00000362588 CC2D2AQ9P2K1 1620 aa6.84□□□□□ -1.31
RNU4-35P-201ENST00000362588 EIF4G1Q04637 1599 aaKnown RBP6.84□□□□□ -1.31
RNU4-35P-201ENST00000362588 CECR2Q9BXF3 1484 aa6.77□□□□□ -1.33
RNU4-35P-201ENST00000362588 SMARCA4P51532 1647 aa6.71□□□□□ -1.34
RNU4-35P-201ENST00000362588 BAZ1AQ9NRL2 1556 aaPredicted RBP6.65□□□□□ -1.34
RNU4-35P-201ENST00000362588 MROH2BQ7Z745 1585 aa6.65□□□□□ -1.35
RNU4-35P-201ENST00000362588 ATAD2BQ9ULI0 1458 aa6.64□□□□□ -1.35
RNU4-35P-201ENST00000362588 SMARCA2P51531 1590 aa6.62□□□□□ -1.35
RNU4-35P-201ENST00000362588 WIZO95785 1651 aa6.61□□□□□ -1.35
RNU4-35P-201ENST00000362588 HMGXB3Q12766 1538 aa6.6□□□□□ -1.35
RNU4-35P-201ENST00000362588 NCAPD3P42695 1498 aa6.6□□□□□ -1.35
RNU4-35P-201ENST00000362588 PEG3Q9GZU2 1588 aa6.6□□□□□ -1.35
RNU4-35P-201ENST00000362588 BAZ1BQ9UIG0 1483 aaKnown RBP6.59□□□□□ -1.36
RNU4-35P-201ENST00000362588 NESP48681 1621 aa6.54□□□□□ -1.36
RNU4-35P-201ENST00000362588 RSF1Q96T23 1441 aaPredicted RBP6.52□□□□□ -1.37
RNU4-35P-201ENST00000362588 KIF21AQ7Z4S6 1674 aa6.51□□□□□ -1.37
RNU4-35P-201ENST00000362588 ERCC6Q03468 1493 aa6.49□□□□□ -1.37
RNU4-35P-201ENST00000362588 TOP2AP11388 1531 aaKnown RBP6.49□□□□□ -1.37
RNU4-35P-201ENST00000362588 LAMC3Q9Y6N6 1575 aa6.47□□□□□ -1.37
RNU4-35P-201ENST00000362588 THOC2Q8NI27 1593 aaKnown RBP6.46□□□□□ -1.38
RNU4-35P-201ENST00000362588 PRDM2Q13029 1718 aa6.43□□□□□ -1.38
RNU4-35P-201ENST00000362588 CADPSQ9ULU8 1353 aa6.42□□□□□ -1.38
RNU4-35P-201ENST00000362588 CCDC88BA6NC98 1476 aa6.41□□□□□ -1.38
RNU4-35P-201ENST00000362588 CUX2O14529 1486 aa6.41□□□□□ -1.38
RNU4-35P-201ENST00000362588 PDS5BQ9NTI5 1447 aa6.39□□□□□ -1.39
RNU4-35P-201ENST00000362588 CFTRP13569 1480 aa6.39□□□□□ -1.39
RNU4-35P-201ENST00000362588 FANCD2Q9BXW9 1451 aa6.38□□□□□ -1.39
RNU4-35P-201ENST00000362588 MRC2Q9UBG0 1479 aa6.37□□□□□ -1.39
RNU4-35P-201ENST00000362588 CEP164Q9UPV0 1460 aa6.37□□□□□ -1.39
RNU4-35P-201ENST00000362588 WDR62O43379 1518 aa6.36□□□□□ -1.39
RNU4-35P-201ENST00000362588 SUPT5HO00267 1087 aaKnown RBP6.36□□□□□ -1.39
RNU4-35P-201ENST00000362588 URB2Q14146 1524 aaKnown RBP6.34□□□□□ -1.39
RNU4-35P-201ENST00000362588 TOPBP1Q92547 1522 aa6.29□□□□□ -1.4
RNU4-35P-201ENST00000362588 DNMBPQ6XZF7 1577 aa6.27□□□□□ -1.41
RNU4-35P-201ENST00000362588 ZNF608Q9ULD9 1512 aaPredicted RBP6.25□□□□□ -1.41
RNU4-35P-201ENST00000362588 EIF4G3O43432 1585 aaKnown RBP6.24□□□□□ -1.41
RNU4-35P-201ENST00000362588 CUX1P39880 1505 aa6.24□□□□□ -1.41
RNU4-35P-201ENST00000362588 POLA1P09884 1462 aaPredicted RBP6.23□□□□□ -1.41
RNU4-35P-201ENST00000362588 DNAJC5Q9H3Z4 198 aa6.23□□□□□ -1.41
RNU4-35P-201ENST00000362588 TARBP1Q13395 1621 aaKnown RBP6.23□□□□□ -1.41
RNU4-35P-201ENST00000362588 RAD54L2Q9Y4B4 1467 aa6.22□□□□□ -1.41
RNU4-35P-201ENST00000362588 ABCC8Q09428 1581 aa6.22□□□□□ -1.41
RNU4-35P-201ENST00000362588 FGD5Q6ZNL6 1462 aa6.22□□□□□ -1.41
RNU4-35P-201ENST00000362588 IFT140Q96RY7 1462 aa6.22□□□□□ -1.41
RNU4-35P-201ENST00000362588 WDR97A6NE52 1622 aa6.21□□□□□ -1.41
RNU4-35P-201ENST00000362588 CHD1O14646 1710 aa6.2□□□□□ -1.42
RNU4-35P-201ENST00000362588 SYNJ1O43426 1573 aa6.2□□□□□ -1.42
RNU4-35P-201ENST00000362588 AQRO60306 1485 aaKnown RBP eCLIP6.19□□□□□ -1.42
RNU4-35P-201ENST00000362588 BIVM-ERCC5R4GMW8 1640 aa6.18□□□□□ -1.42
RNU4-35P-201ENST00000362588 PBRM1Q86U86 1689 aa6.18□□□□□ -1.42
RNU4-35P-201ENST00000362588 SOGA1O94964 1423 aa6.17□□□□□ -1.42
RNU4-35P-201ENST00000362588 TOP2BQ02880 1626 aa6.17□□□□□ -1.42
RNU4-35P-201ENST00000362588 TDRD9Q8NDG6 1382 aaKnown RBP6.17□□□□□ -1.42
RNU4-35P-201ENST00000362588 WRNQ14191 1432 aaPredicted RBP eCLIP6.16□□□□□ -1.42
RNU4-35P-201ENST00000362588 ABCA5Q8WWZ7 1642 aa6.15□□□□□ -1.42
RNU4-35P-201ENST00000362588 SNAPC4Q5SXM2 1469 aa6.14□□□□□ -1.43
RNU4-35P-201ENST00000362588 ABCA10Q8WWZ4 1543 aa6.13□□□□□ -1.43
RNU4-35P-201ENST00000362588 RIMBP3CA6NJZ7 1639 aa6.11□□□□□ -1.43
RNU4-35P-201ENST00000362588 RIMBP3BA6NNM3 1639 aa6.11□□□□□ -1.43
RNU4-35P-201ENST00000362588 RIMBP3Q9UFD9 1639 aa6.11□□□□□ -1.43
RNU4-35P-201ENST00000362588 GAPVD1Q14C86 1478 aa6.11□□□□□ -1.43
RNU4-35P-201ENST00000362588 FBLN2P98095 1184 aa6.11□□□□□ -1.43
RNU4-35P-201ENST00000362588 GRIN2BQ13224 1484 aa6.1□□□□□ -1.43
RNU4-35P-201ENST00000362588 OSCARQ8IYS5 282 aa6.1□□□□□ -1.43
RNU4-35P-201ENST00000362588 ADAMTS12P58397 1594 aa6.1□□□□□ -1.43
RNU4-35P-201ENST00000362588 ARHGEF11O15085 1522 aa6.09□□□□□ -1.44
RNU4-35P-201ENST00000362588 MAGI1Q96QZ7 1491 aaPredicted RBP6.09□□□□□ -1.44
RNU4-35P-201ENST00000362588 SYNJ2O15056 1496 aa6.08□□□□□ -1.44
RNU4-35P-201ENST00000362588 TRIM41Q8WV44 630 aa6.07□□□□□ -1.44
RNU4-35P-201ENST00000362588 CLASP1Q7Z460 1538 aa6.07□□□□□ -1.44
RNU4-35P-201ENST00000362588 CEP170Q5SW79 1584 aa6.06□□□□□ -1.44
RNU4-35P-201ENST00000362588 ERICH3Q5RHP9 1530 aa6.05□□□□□ -1.44
RNU4-35P-201ENST00000362588 CHMP7Q8WUX9 453 aaPredicted RBP6.05□□□□□ -1.44
RNU4-35P-201ENST00000362588 GRIN2AQ12879 1464 aa6.04□□□□□ -1.44
RNU4-35P-201ENST00000362588 ARAP1Q96P48 1450 aa6.03□□□□□ -1.44
RNU4-35P-201ENST00000362588 ERCC6L2Q5T890 1561 aa6.03□□□□□ -1.44
RNU4-35P-201ENST00000362588 FHAD1B1AJZ9 1412 aa6.02□□□□□ -1.45
RNU4-35P-201ENST00000362588 RUSC2Q8N2Y8 1516 aa6.02□□□□□ -1.45
RNU4-35P-201ENST00000362588 CUL7Q14999 1698 aa6.01□□□□□ -1.45
RNU4-35P-201ENST00000362588 NUP160Q12769 1436 aa6□□□□□ -1.45
RNU4-35P-201ENST00000362588 KIF27Q86VH2 1401 aa6□□□□□ -1.45
RNU4-35P-201ENST00000362588 SHROOM2Q13796 1616 aa6□□□□□ -1.45
RNU4-35P-201ENST00000362588 CYB5RLQ6IPT4 315 aa5.99□□□□□ -1.45
RNU4-35P-201ENST00000362588 IGF1RP08069 1367 aa5.98□□□□□ -1.45
RNU4-35P-201ENST00000362588 CARMIL1Q5VZK9 1371 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms