RNA–Protein interactions for RNA: ENST00000362550.1

RN7SKP170-201, Transcript of RNA, 7SK small nuclear pseudogene 170, humanhuman

BASIC

Gene RN7SKP170, Length 328 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP170-201ENST00000362550 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
RN7SKP170-201ENST00000362550 CCDC180Q9P1Z9 1646 aa25.89■■□□□ 1.74
RN7SKP170-201ENST00000362550 ABCC9O60706 1549 aa25.79■■□□□ 1.72
RN7SKP170-201ENST00000362550 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
RN7SKP170-201ENST00000362550 DCAF8L2P0C7V8 631 aa24.71■■□□□ 1.55
RN7SKP170-201ENST00000362550 NACADO15069 1562 aa24.63■■□□□ 1.53
RN7SKP170-201ENST00000362550 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
RN7SKP170-201ENST00000362550 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
RN7SKP170-201ENST00000362550 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
RN7SKP170-201ENST00000362550 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
RN7SKP170-201ENST00000362550 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
RN7SKP170-201ENST00000362550 SHROOM4Q9ULL8 1493 aa23.86■■□□□ 1.41
RN7SKP170-201ENST00000362550 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
RN7SKP170-201ENST00000362550 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
RN7SKP170-201ENST00000362550 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
RN7SKP170-201ENST00000362550 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
RN7SKP170-201ENST00000362550 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
RN7SKP170-201ENST00000362550 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
RN7SKP170-201ENST00000362550 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
RN7SKP170-201ENST00000362550 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
RN7SKP170-201ENST00000362550 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
RN7SKP170-201ENST00000362550 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
RN7SKP170-201ENST00000362550 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
RN7SKP170-201ENST00000362550 ERCC6Q03468 1493 aa22.48■■□□□ 1.19
RN7SKP170-201ENST00000362550 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
RN7SKP170-201ENST00000362550 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
RN7SKP170-201ENST00000362550 CUX2O14529 1486 aa22.38■■□□□ 1.17
RN7SKP170-201ENST00000362550 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.17
RN7SKP170-201ENST00000362550 DNAJC5Q9H3Z4 198 aa22.27■■□□□ 1.16
RN7SKP170-201ENST00000362550 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
RN7SKP170-201ENST00000362550 MROH2BQ7Z745 1585 aa22.21■■□□□ 1.15
RN7SKP170-201ENST00000362550 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
RN7SKP170-201ENST00000362550 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
RN7SKP170-201ENST00000362550 NESP48681 1621 aa22.06■■□□□ 1.12
RN7SKP170-201ENST00000362550 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
RN7SKP170-201ENST00000362550 WIZO95785 1651 aa21.85■■□□□ 1.09
RN7SKP170-201ENST00000362550 MRC2Q9UBG0 1479 aa21.84■■□□□ 1.09
RN7SKP170-201ENST00000362550 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
RN7SKP170-201ENST00000362550 CFTRP13569 1480 aa21.79■■□□□ 1.08
RN7SKP170-201ENST00000362550 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
RN7SKP170-201ENST00000362550 THOC2Q8NI27 1593 aaKnown RBP21.78■■□□□ 1.08
RN7SKP170-201ENST00000362550 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.07
RN7SKP170-201ENST00000362550 WDR62O43379 1518 aa21.68■■□□□ 1.06
RN7SKP170-201ENST00000362550 KIF21AQ7Z4S6 1674 aa21.68■■□□□ 1.06
RN7SKP170-201ENST00000362550 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
RN7SKP170-201ENST00000362550 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
RN7SKP170-201ENST00000362550 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
RN7SKP170-201ENST00000362550 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
RN7SKP170-201ENST00000362550 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
RN7SKP170-201ENST00000362550 TRIM41Q8WV44 630 aa21.31■■□□□ 1
RN7SKP170-201ENST00000362550 TOPBP1Q92547 1522 aa21.29■■□□□ 1
RN7SKP170-201ENST00000362550 PRDM2Q13029 1718 aa21.29■■□□□ 1
RN7SKP170-201ENST00000362550 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
RN7SKP170-201ENST00000362550 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
RN7SKP170-201ENST00000362550 SOGA1O94964 1423 aa21.16■□□□□ 0.98
RN7SKP170-201ENST00000362550 FBLN2P98095 1184 aa21.15■□□□□ 0.98
RN7SKP170-201ENST00000362550 ZNF608Q9ULD9 1512 aaPredicted RBP21.11■□□□□ 0.97
RN7SKP170-201ENST00000362550 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
RN7SKP170-201ENST00000362550 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
RN7SKP170-201ENST00000362550 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.96
RN7SKP170-201ENST00000362550 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
RN7SKP170-201ENST00000362550 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
RN7SKP170-201ENST00000362550 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
RN7SKP170-201ENST00000362550 FGD5Q6ZNL6 1462 aa20.96■□□□□ 0.95
RN7SKP170-201ENST00000362550 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
RN7SKP170-201ENST00000362550 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
RN7SKP170-201ENST00000362550 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
RN7SKP170-201ENST00000362550 CYB5RLQ6IPT4 315 aa20.93■□□□□ 0.94
RN7SKP170-201ENST00000362550 MAGI1Q96QZ7 1491 aaPredicted RBP20.93■□□□□ 0.94
RN7SKP170-201ENST00000362550 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
RN7SKP170-201ENST00000362550 ARHGEF11O15085 1522 aa20.87■□□□□ 0.93
RN7SKP170-201ENST00000362550 CUX1P39880 1505 aa20.87■□□□□ 0.93
RN7SKP170-201ENST00000362550 AEBP2Q6ZN18 517 aaPredicted RBP20.86■□□□□ 0.93
RN7SKP170-201ENST00000362550 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
RN7SKP170-201ENST00000362550 SYNJ2O15056 1496 aa20.83■□□□□ 0.93
RN7SKP170-201ENST00000362550 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
RN7SKP170-201ENST00000362550 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
RN7SKP170-201ENST00000362550 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
RN7SKP170-201ENST00000362550 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
RN7SKP170-201ENST00000362550 SYNJ1O43426 1573 aa20.8■□□□□ 0.92
RN7SKP170-201ENST00000362550 ABCA10Q8WWZ4 1543 aa20.8■□□□□ 0.92
RN7SKP170-201ENST00000362550 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
RN7SKP170-201ENST00000362550 CHD1O14646 1710 aa20.7■□□□□ 0.9
RN7SKP170-201ENST00000362550 FHAD1B1AJZ9 1412 aa20.66■□□□□ 0.9
RN7SKP170-201ENST00000362550 TOP2BQ02880 1626 aa20.64■□□□□ 0.89
RN7SKP170-201ENST00000362550 ARAP1Q96P48 1450 aa20.61■□□□□ 0.89
RN7SKP170-201ENST00000362550 CLASP1Q7Z460 1538 aa20.59■□□□□ 0.89
RN7SKP170-201ENST00000362550 ERICH3Q5RHP9 1530 aa20.58■□□□□ 0.89
RN7SKP170-201ENST00000362550 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
RN7SKP170-201ENST00000362550 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
RN7SKP170-201ENST00000362550 BIVM-ERCC5R4GMW8 1640 aa20.55■□□□□ 0.88
RN7SKP170-201ENST00000362550 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
RN7SKP170-201ENST00000362550 NPM1P06748 294 aaKnown RBP eCLIP20.52■□□□□ 0.88
RN7SKP170-201ENST00000362550 JPH4Q96JJ6 628 aa20.51■□□□□ 0.87
RN7SKP170-201ENST00000362550 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
RN7SKP170-201ENST00000362550 NUP160Q12769 1436 aa20.5■□□□□ 0.87
RN7SKP170-201ENST00000362550 ADAMTS12P58397 1594 aa20.43■□□□□ 0.86
RN7SKP170-201ENST00000362550 FAM9AQ8IZU1 332 aaPredicted RBP20.39■□□□□ 0.85
RN7SKP170-201ENST00000362550 PRG4Q92954 1404 aaPredicted RBP20.37■□□□□ 0.85
RN7SKP170-201ENST00000362550 IGF1RP08069 1367 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms