RNA–Protein interactions for RNA: ENST00000362467.1

RNA5S3-201, Transcript of RNA, 5S ribosomal 3, humanhuman

BASIC

Gene RNA5S3, Length 119 nt, Biotype rRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5S3-201ENST00000362467 NISCHQ9Y2I1 1504 aa26.09■■□□□ 1.77
RNA5S3-201ENST00000362467 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
RNA5S3-201ENST00000362467 ABCC9O60706 1549 aa22.76■■□□□ 1.23
RNA5S3-201ENST00000362467 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
RNA5S3-201ENST00000362467 NACADO15069 1562 aa21.78■■□□□ 1.08
RNA5S3-201ENST00000362467 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
RNA5S3-201ENST00000362467 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
RNA5S3-201ENST00000362467 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
RNA5S3-201ENST00000362467 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
RNA5S3-201ENST00000362467 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
RNA5S3-201ENST00000362467 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
RNA5S3-201ENST00000362467 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
RNA5S3-201ENST00000362467 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
RNA5S3-201ENST00000362467 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
RNA5S3-201ENST00000362467 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
RNA5S3-201ENST00000362467 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
RNA5S3-201ENST00000362467 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
RNA5S3-201ENST00000362467 CECR2Q9BXF3 1484 aa20.43■□□□□ 0.86
RNA5S3-201ENST00000362467 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
RNA5S3-201ENST00000362467 BAZ1AQ9NRL2 1556 aaPredicted RBP20.18■□□□□ 0.82
RNA5S3-201ENST00000362467 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
RNA5S3-201ENST00000362467 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
RNA5S3-201ENST00000362467 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
RNA5S3-201ENST00000362467 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
RNA5S3-201ENST00000362467 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
RNA5S3-201ENST00000362467 HMGXB3Q12766 1538 aa20.01■□□□□ 0.79
RNA5S3-201ENST00000362467 BAZ1BQ9UIG0 1483 aaKnown RBP19.96■□□□□ 0.79
RNA5S3-201ENST00000362467 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
RNA5S3-201ENST00000362467 WIZO95785 1651 aa19.87■□□□□ 0.77
RNA5S3-201ENST00000362467 NESP48681 1621 aa19.71■□□□□ 0.75
RNA5S3-201ENST00000362467 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
RNA5S3-201ENST00000362467 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
RNA5S3-201ENST00000362467 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
RNA5S3-201ENST00000362467 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
RNA5S3-201ENST00000362467 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
RNA5S3-201ENST00000362467 CFTRP13569 1480 aa19.45■□□□□ 0.7
RNA5S3-201ENST00000362467 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
RNA5S3-201ENST00000362467 KIF21AQ7Z4S6 1674 aa19.38■□□□□ 0.69
RNA5S3-201ENST00000362467 THOC2Q8NI27 1593 aaKnown RBP19.37■□□□□ 0.69
RNA5S3-201ENST00000362467 CUX2O14529 1486 aa19.36■□□□□ 0.69
RNA5S3-201ENST00000362467 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
RNA5S3-201ENST00000362467 FANCD2Q9BXW9 1451 aa19.33■□□□□ 0.68
RNA5S3-201ENST00000362467 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
RNA5S3-201ENST00000362467 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
RNA5S3-201ENST00000362467 WDR62O43379 1518 aa19.22■□□□□ 0.67
RNA5S3-201ENST00000362467 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
RNA5S3-201ENST00000362467 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
RNA5S3-201ENST00000362467 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
RNA5S3-201ENST00000362467 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
RNA5S3-201ENST00000362467 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
RNA5S3-201ENST00000362467 CUX1P39880 1505 aa18.9■□□□□ 0.62
RNA5S3-201ENST00000362467 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
RNA5S3-201ENST00000362467 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
RNA5S3-201ENST00000362467 POLA1P09884 1462 aaPredicted RBP18.87■□□□□ 0.61
RNA5S3-201ENST00000362467 DNAJC5Q9H3Z4 198 aa18.86■□□□□ 0.61
RNA5S3-201ENST00000362467 FGD5Q6ZNL6 1462 aa18.81■□□□□ 0.6
RNA5S3-201ENST00000362467 RAD54L2Q9Y4B4 1467 aa18.81■□□□□ 0.6
RNA5S3-201ENST00000362467 TARBP1Q13395 1621 aaKnown RBP18.81■□□□□ 0.6
RNA5S3-201ENST00000362467 SOGA1O94964 1423 aa18.76■□□□□ 0.59
RNA5S3-201ENST00000362467 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.59
RNA5S3-201ENST00000362467 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
RNA5S3-201ENST00000362467 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
RNA5S3-201ENST00000362467 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
RNA5S3-201ENST00000362467 TDRD9Q8NDG6 1382 aaKnown RBP18.7■□□□□ 0.58
RNA5S3-201ENST00000362467 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
RNA5S3-201ENST00000362467 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
RNA5S3-201ENST00000362467 ABCA10Q8WWZ4 1543 aa18.62■□□□□ 0.57
RNA5S3-201ENST00000362467 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
RNA5S3-201ENST00000362467 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
RNA5S3-201ENST00000362467 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
RNA5S3-201ENST00000362467 GRIN2BQ13224 1484 aa18.54■□□□□ 0.56
RNA5S3-201ENST00000362467 GAPVD1Q14C86 1478 aa18.54■□□□□ 0.56
RNA5S3-201ENST00000362467 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
RNA5S3-201ENST00000362467 MAGI1Q96QZ7 1491 aaPredicted RBP18.48■□□□□ 0.55
RNA5S3-201ENST00000362467 FBLN2P98095 1184 aa18.46■□□□□ 0.55
RNA5S3-201ENST00000362467 CHD1O14646 1710 aa18.45■□□□□ 0.54
RNA5S3-201ENST00000362467 PBRM1Q86U86 1689 aa18.44■□□□□ 0.54
RNA5S3-201ENST00000362467 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
RNA5S3-201ENST00000362467 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
RNA5S3-201ENST00000362467 ADAMTS12P58397 1594 aa18.37■□□□□ 0.53
RNA5S3-201ENST00000362467 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
RNA5S3-201ENST00000362467 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.53
RNA5S3-201ENST00000362467 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
RNA5S3-201ENST00000362467 GRIN2AQ12879 1464 aa18.32■□□□□ 0.52
RNA5S3-201ENST00000362467 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
RNA5S3-201ENST00000362467 IGF1RP08069 1367 aa18.3■□□□□ 0.52
RNA5S3-201ENST00000362467 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
RNA5S3-201ENST00000362467 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.52
RNA5S3-201ENST00000362467 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.52
RNA5S3-201ENST00000362467 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.52
RNA5S3-201ENST00000362467 NUP160Q12769 1436 aa18.27■□□□□ 0.52
RNA5S3-201ENST00000362467 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
RNA5S3-201ENST00000362467 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
RNA5S3-201ENST00000362467 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
RNA5S3-201ENST00000362467 ARAP1Q96P48 1450 aa18.18■□□□□ 0.5
RNA5S3-201ENST00000362467 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
RNA5S3-201ENST00000362467 CUL7Q14999 1698 aa18.14■□□□□ 0.49
RNA5S3-201ENST00000362467 CYB5RLQ6IPT4 315 aa18.12■□□□□ 0.49
RNA5S3-201ENST00000362467 ERCC6L2Q5T890 1561 aa18.12■□□□□ 0.49
RNA5S3-201ENST00000362467 SHROOM2Q13796 1616 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms