RNA–Protein interactions for RNA: ENST00000361764.8

HHLA3-202, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene HHLA3, Length 692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-202ENST00000361764 NISCHQ9Y2I1 1504 aa32.13■■■□□ 2.73
HHLA3-202ENST00000361764 ABCC9O60706 1549 aa29.71■■■□□ 2.35
HHLA3-202ENST00000361764 CCDC180Q9P1Z9 1646 aa29.08■■■□□ 2.25
HHLA3-202ENST00000361764 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.15
HHLA3-202ENST00000361764 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
HHLA3-202ENST00000361764 NACADO15069 1562 aa27.6■■■□□ 2.01
HHLA3-202ENST00000361764 PABPN1Q86U42 306 aaKnown RBP eCLIP27.57■■■□□ 2
HHLA3-202ENST00000361764 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
HHLA3-202ENST00000361764 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
HHLA3-202ENST00000361764 BICRAQ9NZM4 1560 aa27.28■■□□□ 1.96
HHLA3-202ENST00000361764 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
HHLA3-202ENST00000361764 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
HHLA3-202ENST00000361764 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
HHLA3-202ENST00000361764 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
HHLA3-202ENST00000361764 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
HHLA3-202ENST00000361764 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
HHLA3-202ENST00000361764 DNAJC5Q9H3Z4 198 aa26.5■■□□□ 1.83
HHLA3-202ENST00000361764 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
HHLA3-202ENST00000361764 DCAF1Q9Y4B6 1507 aa26.45■■□□□ 1.83
HHLA3-202ENST00000361764 CUX2O14529 1486 aa25.77■■□□□ 1.72
HHLA3-202ENST00000361764 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
HHLA3-202ENST00000361764 NCAPD3P42695 1498 aa25.51■■□□□ 1.67
HHLA3-202ENST00000361764 NESP48681 1621 aa25.39■■□□□ 1.66
HHLA3-202ENST00000361764 ATAD2BQ9ULI0 1458 aa25.37■■□□□ 1.65
HHLA3-202ENST00000361764 HMGXB3Q12766 1538 aa25.25■■□□□ 1.63
HHLA3-202ENST00000361764 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
HHLA3-202ENST00000361764 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
HHLA3-202ENST00000361764 SMARCA2P51531 1590 aa25.21■■□□□ 1.63
HHLA3-202ENST00000361764 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
HHLA3-202ENST00000361764 KIF21AQ7Z4S6 1674 aa25.06■■□□□ 1.6
HHLA3-202ENST00000361764 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
HHLA3-202ENST00000361764 LAMC3Q9Y6N6 1575 aa25.02■■□□□ 1.6
HHLA3-202ENST00000361764 PEG3Q9GZU2 1588 aa24.95■■□□□ 1.58
HHLA3-202ENST00000361764 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
HHLA3-202ENST00000361764 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
HHLA3-202ENST00000361764 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
HHLA3-202ENST00000361764 MRC2Q9UBG0 1479 aa24.71■■□□□ 1.55
HHLA3-202ENST00000361764 WDR62O43379 1518 aa24.71■■□□□ 1.55
HHLA3-202ENST00000361764 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
HHLA3-202ENST00000361764 WIZO95785 1651 aa24.5■■□□□ 1.51
HHLA3-202ENST00000361764 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
HHLA3-202ENST00000361764 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
HHLA3-202ENST00000361764 FANCD2Q9BXW9 1451 aa24.43■■□□□ 1.5
HHLA3-202ENST00000361764 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
HHLA3-202ENST00000361764 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
HHLA3-202ENST00000361764 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
HHLA3-202ENST00000361764 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
HHLA3-202ENST00000361764 CFTRP13569 1480 aa24.31■■□□□ 1.48
HHLA3-202ENST00000361764 ARHGEF11O15085 1522 aa24.16■■□□□ 1.46
HHLA3-202ENST00000361764 ZNF608Q9ULD9 1512 aaPredicted RBP24.14■■□□□ 1.45
HHLA3-202ENST00000361764 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
HHLA3-202ENST00000361764 TOP2AP11388 1531 aaKnown RBP24.05■■□□□ 1.44
HHLA3-202ENST00000361764 RSF1Q96T23 1441 aaPredicted RBP24.02■■□□□ 1.44
HHLA3-202ENST00000361764 CYB5RLQ6IPT4 315 aa24.01■■□□□ 1.43
HHLA3-202ENST00000361764 IFT140Q96RY7 1462 aa24■■□□□ 1.43
HHLA3-202ENST00000361764 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
HHLA3-202ENST00000361764 CHD1O14646 1710 aa23.93■■□□□ 1.42
HHLA3-202ENST00000361764 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
HHLA3-202ENST00000361764 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
HHLA3-202ENST00000361764 TRHP20396 242 aaPredicted RBP23.88■■□□□ 1.41
HHLA3-202ENST00000361764 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
HHLA3-202ENST00000361764 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.4
HHLA3-202ENST00000361764 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
HHLA3-202ENST00000361764 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
HHLA3-202ENST00000361764 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
HHLA3-202ENST00000361764 FBLN2P98095 1184 aa23.71■■□□□ 1.39
HHLA3-202ENST00000361764 POLA1P09884 1462 aaPredicted RBP23.64■■□□□ 1.38
HHLA3-202ENST00000361764 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
HHLA3-202ENST00000361764 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
HHLA3-202ENST00000361764 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
HHLA3-202ENST00000361764 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
HHLA3-202ENST00000361764 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
HHLA3-202ENST00000361764 SOGA1O94964 1423 aa23.49■■□□□ 1.35
HHLA3-202ENST00000361764 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
HHLA3-202ENST00000361764 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
HHLA3-202ENST00000361764 FGD5Q6ZNL6 1462 aa23.4■■□□□ 1.34
HHLA3-202ENST00000361764 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.34
HHLA3-202ENST00000361764 WDR97A6NE52 1622 aa23.38■■□□□ 1.33
HHLA3-202ENST00000361764 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
HHLA3-202ENST00000361764 GAPVD1Q14C86 1478 aa23.34■■□□□ 1.33
HHLA3-202ENST00000361764 GRIN2BQ13224 1484 aa23.33■■□□□ 1.33
HHLA3-202ENST00000361764 CUX1P39880 1505 aa23.33■■□□□ 1.32
HHLA3-202ENST00000361764 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
HHLA3-202ENST00000361764 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
HHLA3-202ENST00000361764 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
HHLA3-202ENST00000361764 KIF13AQ9H1H9 1805 aa23.11■■□□□ 1.29
HHLA3-202ENST00000361764 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
HHLA3-202ENST00000361764 ABCA10Q8WWZ4 1543 aa23.08■■□□□ 1.28
HHLA3-202ENST00000361764 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
HHLA3-202ENST00000361764 SHROOM2Q13796 1616 aa23.02■■□□□ 1.28
HHLA3-202ENST00000361764 NUP160Q12769 1436 aa23.01■■□□□ 1.27
HHLA3-202ENST00000361764 ADAMTS12P58397 1594 aa23■■□□□ 1.27
HHLA3-202ENST00000361764 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
HHLA3-202ENST00000361764 PRG4Q92954 1404 aaPredicted RBP22.83■■□□□ 1.25
HHLA3-202ENST00000361764 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
HHLA3-202ENST00000361764 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
HHLA3-202ENST00000361764 ABCC10Q5T3U5 1492 aa22.8■■□□□ 1.24
HHLA3-202ENST00000361764 FAM69CQ0P6D2 419 aa22.8■■□□□ 1.24
HHLA3-202ENST00000361764 DIP2BQ9P265 1576 aa22.77■■□□□ 1.24
HHLA3-202ENST00000361764 BIVM-ERCC5R4GMW8 1640 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms