RNA–Protein interactions for RNA: ENST00000358888.7

RPL41-201, Transcript of ribosomal protein L41, humanhuman

TSL 3

Gene RPL41, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL41-201ENST00000358888 NISCHQ9Y2I1 1504 aa25.61■■□□□ 1.69
RPL41-201ENST00000358888 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
RPL41-201ENST00000358888 ABCC9O60706 1549 aa22.98■■□□□ 1.27
RPL41-201ENST00000358888 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
RPL41-201ENST00000358888 NACADO15069 1562 aa21.82■■□□□ 1.08
RPL41-201ENST00000358888 MYO15BQ96JP2 1530 aa21.58■■□□□ 1.04
RPL41-201ENST00000358888 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
RPL41-201ENST00000358888 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
RPL41-201ENST00000358888 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
RPL41-201ENST00000358888 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
RPL41-201ENST00000358888 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
RPL41-201ENST00000358888 DCAF1Q9Y4B6 1507 aa21.26■□□□□ 0.99
RPL41-201ENST00000358888 PABPN1Q86U42 306 aaKnown RBP eCLIP21.25■□□□□ 0.995e-9■□□□□ 10.3
RPL41-201ENST00000358888 SHROOM4Q9ULL8 1493 aa21.19■□□□□ 0.98
RPL41-201ENST00000358888 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
RPL41-201ENST00000358888 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
RPL41-201ENST00000358888 EIF4G1Q04637 1599 aaKnown RBP20.82■□□□□ 0.92
RPL41-201ENST00000358888 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
RPL41-201ENST00000358888 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
RPL41-201ENST00000358888 HMGXB3Q12766 1538 aa20.05■□□□□ 0.8
RPL41-201ENST00000358888 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
RPL41-201ENST00000358888 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
RPL41-201ENST00000358888 ATAD2BQ9ULI0 1458 aa20.01■□□□□ 0.79
RPL41-201ENST00000358888 CUX2O14529 1486 aa19.97■□□□□ 0.79
RPL41-201ENST00000358888 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
RPL41-201ENST00000358888 PEG3Q9GZU2 1588 aa19.91■□□□□ 0.78
RPL41-201ENST00000358888 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
RPL41-201ENST00000358888 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.76
RPL41-201ENST00000358888 DNAJC5Q9H3Z4 198 aa19.82■□□□□ 0.76
RPL41-201ENST00000358888 NESP48681 1621 aa19.73■□□□□ 0.75
RPL41-201ENST00000358888 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
RPL41-201ENST00000358888 THOC2Q8NI27 1593 aaKnown RBP19.71■□□□□ 0.75
RPL41-201ENST00000358888 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
RPL41-201ENST00000358888 KIF21AQ7Z4S6 1674 aa19.6■□□□□ 0.73
RPL41-201ENST00000358888 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
RPL41-201ENST00000358888 WIZO95785 1651 aa19.47■□□□□ 0.71
RPL41-201ENST00000358888 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
RPL41-201ENST00000358888 WDR62O43379 1518 aa19.41■□□□□ 0.7
RPL41-201ENST00000358888 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
RPL41-201ENST00000358888 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
RPL41-201ENST00000358888 TOP2AP11388 1531 aaKnown RBP19.3■□□□□ 0.68
RPL41-201ENST00000358888 CFTRP13569 1480 aa19.25■□□□□ 0.67
RPL41-201ENST00000358888 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
RPL41-201ENST00000358888 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
RPL41-201ENST00000358888 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
RPL41-201ENST00000358888 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
RPL41-201ENST00000358888 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
RPL41-201ENST00000358888 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
RPL41-201ENST00000358888 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
RPL41-201ENST00000358888 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
RPL41-201ENST00000358888 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
RPL41-201ENST00000358888 EIF4G3O43432 1585 aaKnown RBP18.85■□□□□ 0.61
RPL41-201ENST00000358888 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
RPL41-201ENST00000358888 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.6
RPL41-201ENST00000358888 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
RPL41-201ENST00000358888 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
RPL41-201ENST00000358888 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
RPL41-201ENST00000358888 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
RPL41-201ENST00000358888 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
RPL41-201ENST00000358888 CHD1O14646 1710 aa18.71■□□□□ 0.59
RPL41-201ENST00000358888 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
RPL41-201ENST00000358888 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
RPL41-201ENST00000358888 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
RPL41-201ENST00000358888 AQRO60306 1485 aaKnown RBP eCLIP18.59■□□□□ 0.578e-42■■■■■ 77.3
RPL41-201ENST00000358888 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
RPL41-201ENST00000358888 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
RPL41-201ENST00000358888 CUX1P39880 1505 aa18.54■□□□□ 0.56
RPL41-201ENST00000358888 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
RPL41-201ENST00000358888 ARAP1Q96P48 1450 aa18.51■□□□□ 0.55
RPL41-201ENST00000358888 SOGA1O94964 1423 aa18.5■□□□□ 0.55
RPL41-201ENST00000358888 CLASP1Q7Z460 1538 aa18.5■□□□□ 0.55
RPL41-201ENST00000358888 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
RPL41-201ENST00000358888 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
RPL41-201ENST00000358888 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
RPL41-201ENST00000358888 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
RPL41-201ENST00000358888 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
RPL41-201ENST00000358888 ABCA5Q8WWZ7 1642 aa18.42■□□□□ 0.54
RPL41-201ENST00000358888 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
RPL41-201ENST00000358888 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
RPL41-201ENST00000358888 FBLN2P98095 1184 aa18.36■□□□□ 0.53
RPL41-201ENST00000358888 GAPVD1Q14C86 1478 aa18.34■□□□□ 0.53
RPL41-201ENST00000358888 CYB5RLQ6IPT4 315 aa18.34■□□□□ 0.53
RPL41-201ENST00000358888 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
RPL41-201ENST00000358888 ADAMTS12P58397 1594 aa18.29■□□□□ 0.52
RPL41-201ENST00000358888 TOP2BQ02880 1626 aa18.27■□□□□ 0.52
RPL41-201ENST00000358888 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.52
RPL41-201ENST00000358888 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
RPL41-201ENST00000358888 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.517e-12■■■■■ 31.3
RPL41-201ENST00000358888 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
RPL41-201ENST00000358888 NUP160Q12769 1436 aa18.18■□□□□ 0.5
RPL41-201ENST00000358888 SHROOM2Q13796 1616 aa18.17■□□□□ 0.5
RPL41-201ENST00000358888 ERICH3Q5RHP9 1530 aa18.17■□□□□ 0.5
RPL41-201ENST00000358888 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
RPL41-201ENST00000358888 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
RPL41-201ENST00000358888 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
RPL41-201ENST00000358888 ERCC6L2Q5T890 1561 aa18.11■□□□□ 0.49
RPL41-201ENST00000358888 RUSC2Q8N2Y8 1516 aa18.04■□□□□ 0.48
RPL41-201ENST00000358888 KIF13AQ9H1H9 1805 aa17.94■□□□□ 0.46
RPL41-201ENST00000358888 CUL7Q14999 1698 aa17.93■□□□□ 0.46
RPL41-201ENST00000358888 PRG4Q92954 1404 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms