RNA–Protein interactions for RNA: ENST00000358597.7

CELF1-202, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-202ENST00000358597 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
CELF1-202ENST00000358597 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
CELF1-202ENST00000358597 ABCC9O60706 1549 aa16.95■□□□□ 0.3
CELF1-202ENST00000358597 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
CELF1-202ENST00000358597 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
CELF1-202ENST00000358597 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
CELF1-202ENST00000358597 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
CELF1-202ENST00000358597 NACADO15069 1562 aa16.51■□□□□ 0.23
CELF1-202ENST00000358597 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
CELF1-202ENST00000358597 RB1CC1Q8TDY2 1594 aa16.44■□□□□ 0.22
CELF1-202ENST00000358597 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
CELF1-202ENST00000358597 SCRIBQ14160 1630 aa16.17■□□□□ 0.18
CELF1-202ENST00000358597 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
CELF1-202ENST00000358597 SHROOM4Q9ULL8 1493 aa16.02■□□□□ 0.16
CELF1-202ENST00000358597 BICRAQ9NZM4 1560 aa15.98■□□□□ 0.15
CELF1-202ENST00000358597 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
CELF1-202ENST00000358597 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.08
CELF1-202ENST00000358597 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
CELF1-202ENST00000358597 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
CELF1-202ENST00000358597 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
CELF1-202ENST00000358597 MROH2BQ7Z745 1585 aa15.47■□□□□ 0.07
CELF1-202ENST00000358597 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
CELF1-202ENST00000358597 CC2D2AQ9P2K1 1620 aa15.37■□□□□ 0.05
CELF1-202ENST00000358597 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
CELF1-202ENST00000358597 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
CELF1-202ENST00000358597 WIZO95785 1651 aa15.34■□□□□ 0.05
CELF1-202ENST00000358597 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
CELF1-202ENST00000358597 ATAD2BQ9ULI0 1458 aa15.29■□□□□ 0.04
CELF1-202ENST00000358597 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
CELF1-202ENST00000358597 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
CELF1-202ENST00000358597 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
CELF1-202ENST00000358597 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
CELF1-202ENST00000358597 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
CELF1-202ENST00000358597 CCDC88BA6NC98 1476 aa14.98□□□□□ -0.01
CELF1-202ENST00000358597 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
CELF1-202ENST00000358597 CFTRP13569 1480 aa14.8□□□□□ -0.04
CELF1-202ENST00000358597 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
CELF1-202ENST00000358597 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
CELF1-202ENST00000358597 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
CELF1-202ENST00000358597 NESP48681 1621 aa14.76□□□□□ -0.05
CELF1-202ENST00000358597 KIF21AQ7Z4S6 1674 aa14.65□□□□□ -0.06
CELF1-202ENST00000358597 ERCC6Q03468 1493 aa14.63□□□□□ -0.07
CELF1-202ENST00000358597 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
CELF1-202ENST00000358597 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
CELF1-202ENST00000358597 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
CELF1-202ENST00000358597 ABCC8Q09428 1581 aa14.57□□□□□ -0.08
CELF1-202ENST00000358597 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
CELF1-202ENST00000358597 WRNQ14191 1432 aaPredicted RBP eCLIP14.5□□□□□ -0.09
CELF1-202ENST00000358597 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
CELF1-202ENST00000358597 CUX1P39880 1505 aa14.49□□□□□ -0.09
CELF1-202ENST00000358597 URB2Q14146 1524 aaKnown RBP14.48□□□□□ -0.09
CELF1-202ENST00000358597 BIVM-ERCC5R4GMW8 1640 aa14.48□□□□□ -0.09
CELF1-202ENST00000358597 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
CELF1-202ENST00000358597 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
CELF1-202ENST00000358597 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
CELF1-202ENST00000358597 WDR62O43379 1518 aa14.45□□□□□ -0.1
CELF1-202ENST00000358597 TOPBP1Q92547 1522 aa14.45□□□□□ -0.1
CELF1-202ENST00000358597 CUX2O14529 1486 aa14.43□□□□□ -0.1
CELF1-202ENST00000358597 PHF23Q9BUL5 403 aaPredicted RBP14.42□□□□□ -0.1
CELF1-202ENST00000358597 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
CELF1-202ENST00000358597 POLA1P09884 1462 aaPredicted RBP14.36□□□□□ -0.11
CELF1-202ENST00000358597 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
CELF1-202ENST00000358597 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
CELF1-202ENST00000358597 TARBP1Q13395 1621 aaKnown RBP14.3□□□□□ -0.12
CELF1-202ENST00000358597 RAD54L2Q9Y4B4 1467 aa14.27□□□□□ -0.12
CELF1-202ENST00000358597 SOGA1O94964 1423 aa14.26□□□□□ -0.13
CELF1-202ENST00000358597 ABCA10Q8WWZ4 1543 aa14.25□□□□□ -0.13
CELF1-202ENST00000358597 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
CELF1-202ENST00000358597 ABCA5Q8WWZ7 1642 aa14.2□□□□□ -0.14
CELF1-202ENST00000358597 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
CELF1-202ENST00000358597 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
CELF1-202ENST00000358597 EIF4G3O43432 1585 aaKnown RBP14.17□□□□□ -0.14
CELF1-202ENST00000358597 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
CELF1-202ENST00000358597 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
CELF1-202ENST00000358597 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
CELF1-202ENST00000358597 EEA1Q15075 1411 aa14.12□□□□□ -0.15
CELF1-202ENST00000358597 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
CELF1-202ENST00000358597 AQRO60306 1485 aaKnown RBP eCLIP14.12□□□□□ -0.152e-7■■■■□ 26.1
CELF1-202ENST00000358597 ERICH3Q5RHP9 1530 aa14.09□□□□□ -0.15
CELF1-202ENST00000358597 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
CELF1-202ENST00000358597 IGF1RP08069 1367 aa14.05□□□□□ -0.16
CELF1-202ENST00000358597 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
CELF1-202ENST00000358597 CUL7Q14999 1698 aa14.05□□□□□ -0.16
CELF1-202ENST00000358597 ADAMTS12P58397 1594 aa14.02□□□□□ -0.16
CELF1-202ENST00000358597 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.16
CELF1-202ENST00000358597 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
CELF1-202ENST00000358597 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
CELF1-202ENST00000358597 KIF21BO75037 1637 aa14.01□□□□□ -0.17
CELF1-202ENST00000358597 MAGI1Q96QZ7 1491 aaPredicted RBP14□□□□□ -0.17
CELF1-202ENST00000358597 CARMIL1Q5VZK9 1371 aa13.96□□□□□ -0.17
CELF1-202ENST00000358597 FHAD1B1AJZ9 1412 aa13.96□□□□□ -0.17
CELF1-202ENST00000358597 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
CELF1-202ENST00000358597 SYNJ2O15056 1496 aa13.94□□□□□ -0.18
CELF1-202ENST00000358597 CHD1O14646 1710 aa13.93□□□□□ -0.18
CELF1-202ENST00000358597 POTEDQ86YR6 584 aa13.93□□□□□ -0.18
CELF1-202ENST00000358597 GOLGA3Q08378 1498 aa13.91□□□□□ -0.18
CELF1-202ENST00000358597 GRIN2AQ12879 1464 aa13.9□□□□□ -0.18
CELF1-202ENST00000358597 CTTNBP2Q8WZ74 1663 aa13.87□□□□□ -0.19
CELF1-202ENST00000358597 LOC105371045A0A1W2PR82 267 aa13.85□□□□□ -0.19
CELF1-202ENST00000358597 CEP170Q5SW79 1584 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms